mRNA_H-paniculata_contig16931.3883.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16931.3883.1
Unique NamemRNA_H-paniculata_contig16931.3883.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: D7G905_ECTSI (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G905_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.310e-90
Identity = 158/237 (66.67%), Postives = 181/237 (76.37%), Query Frame = 2 
Query:  263 EVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAREPLTDVTAVPNGYKKFKMQKPQP-PLGSEYVQYLLGLIQVLAGILGTESSSAVLTPLRGYALKGSFVLGDALEGILDSHAKTNNKRELETDLAII 970
            E MQVKKLSENAI+PVRGSEHAAGFDLASAYEATVPAGRQAL+KTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHG+EDFKV KGDRVAQLILERICMA++EEVTELSET RGSGGFGSTGV +  L   + V NG KK K+   +P    S  V  +L LI  +   L  + +  ++  LR  A+     L D L GIL+ + +T + + L  +L  +
Sbjct:   38 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQSSSTVANGAKKIKVVGSEPVSRASATVAKVLRLIDRVDK-LDVDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMAV 273
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A7S2XY21_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY21_9STRA)

HSP 1 Score: 223 bits (568), Expect = 8.750e-66
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 2 
Query:  260 REVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVARE----------PLTDVTAVPNGYKKFKMQKPQPPLGSEYVQYLLGLIQVLAGI 817
            +E++ VKKLSENA +PVRGS  AAGFDL+SA + TVPAG +ALIKTDLSIAIP NTYARIAPRSGLA KK IDVGAGV+DYDYRGPVGVVLFNH +EDF V KGDRVAQLI+ERICMAE+ EV +L ET RG+GGFGSTGVA            P T+    P   K   ++   PP   + VQ +  L+ V+  I
Sbjct:   74 QEILSVKKLSENATIPVRGSVDAAGFDLSSAVDTTVPAGGKALIKTDLSIAIPQNTYARIAPRSGLAWKKHIDVGAGVIDYDYRGPVGVVLFNHASEDFAVAKGDRVAQLIIERICMAEVVEVDDLPETARGAGGFGSTGVAGPAANGGATTGAPTTEGEGEPPAAKVRVVEAAAPPAAEDKVQAMAQLLAVVNDI 269
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: W7TKM8_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.530e-60
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 2 
Query:  263 EVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMA---ELEEVTELSETIRGSGGFGSTGVARE 691
            E +QVK+LS++A+LPVRGSE AAG+DLASA +  VPA  +AL+KTDLSIAIPPNTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFNHGTEDF V++GDRVAQLILERI MA   E+EE  EL ET RG GGFGSTGV  +
Sbjct:   90 ETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQ 235
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A835YUJ2_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 8.210e-60
Identity = 123/242 (50.83%), Postives = 155/242 (64.05%), Query Frame = 2 
Query:  245 VAAEGREVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAREPLTDVTAVPNGYKKFKMQKPQPPLGSEYVQYLLGLIQVLAGILGTESSSAVLTPLRGYALKGSFVLGDALEGILDSHAKTNNKRELETDLAII 970
            +A +  EVM VKKLS  A LPVRGSEHAAGFDLA+A+ A VPAG +AL+KTD +IA+P  TYAR+APRSGLA K+MID GAGV+DYDYRG VGVVLFNHG E+F V  GDR+AQLILERI MA   EV EL ET RG+GGFGSTG +R   + +       KK K+      L ++ + ++  L        G  +S A    L+  AL         L   + ++  T+N  EL+ +L +I
Sbjct:    9 MATQPVEVMLVKKLSPQAHLPVRGSEHAAGFDLAAAHAAVVPAGGKALVKTDCAIAVPAGTYARVAPRSGLAWKRMIDTGAGVIDYDYRGNVGVVLFNHGPEEFVVEPGDRIAQLILERISMAPALEVQELPETERGAGGFGSTGGSRSLQSALPVSEAAAKKVKLADQGADLTAQMLIFVSSLPD------GVTASKADCDKLKLCALSDRST---RLLAAIRAYEATSNVAELQDNLRLI 241
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A7S1Z1X3_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z1X3_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.750e-57
Identity = 99/146 (67.81%), Postives = 119/146 (81.51%), Query Frame = 2 
Query:  263 EVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAREPLT 700
            +V++VKKLSENA +P +GS  +AGFDL++A   T+ AG + ++KTDLSIA PP TY RIAPRSGLAVKK IDVGAGVVD DYRG VGVVLFN GTEDF++N GDRVAQLILE+I M    EV EL+ET RG+GGFGSTGV+++  T
Sbjct:   18 QVLRVKKLSENATMPTKGSPQSAGFDLSAAESCTIQAGTRGIVKTDLSIACPPGTYGRIAPRSGLAVKKFIDVGAGVVDADYRGAVGVVLFNFGTEDFEINVGDRVAQLILEKISMVPAVEVEELTETERGAGGFGSTGVSKKQRT 163
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A7S0DA79_MICPS (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DA79_MICPS)

HSP 1 Score: 196 bits (497), Expect = 7.350e-57
Identity = 99/156 (63.46%), Postives = 123/156 (78.85%), Query Frame = 2 
Query:  221 SSPRMIMSVAAEGREVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAR 688
            + P +  S  A   + ++VKK+SE+A+LPVRGSE AAG+DLA+AYE  +PA  + L+KTDLSIAIP +TYAR+APRSGLA K  IDVGAGVVDYDYRG VGV+LFNH   DF++  GDRVAQLILERI   E+ EV +L +T RG+GGFGSTGV++
Sbjct:   45 NQPEVHASKMARVEDTLRVKKISEHAVLPVRGSEGAAGYDLAAAYECVIPARGKGLVKTDLSIAIPKDTYARVAPRSGLAWKHFIDVGAGVVDYDYRGNVGVILFNHSDVDFEIKHGDRVAQLILERIATPEVVEVEDLDDTARGAGGFGSTGVSK 200
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A1Y1IFT1_KLENI (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFT1_KLENI)

HSP 1 Score: 194 bits (493), Expect = 1.180e-56
Identity = 97/138 (70.29%), Postives = 117/138 (84.78%), Query Frame = 2 
Query:  269 MQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGV 682
            ++VKKLSE+A+LP RGS+HAAG+DL+SAYEA VPA  QAL+KTDLSIAIP  TYAR+APRSGLA K  IDVGAGV+D DYRGPVGV+LFN   +DFK++ GDR+AQLILERI   E+ +V +L  T+RG+GGFGSTGV
Sbjct:   32 LRVKKLSEHAVLPTRGSQHAAGYDLSSAYEAVVPARGQALVKTDLSIAIPDGTYARVAPRSGLANKHSIDVGAGVIDADYRGPVGVILFNFSDKDFKISAGDRIAQLILERIVTPEVVQVDDLDITVRGAGGFGSTGV 169
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A4S9G9_OSTLU (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9G9_OSTLU)

HSP 1 Score: 193 bits (491), Expect = 1.350e-56
Identity = 100/150 (66.67%), Postives = 122/150 (81.33%), Query Frame = 2 
Query:  269 MQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVARE--PLTDVTA 712
            ++VK+LS++A +P RGSE AAG+DLASA++  VPA  + L+KTDLSIAIP  TYAR+APRSGLA KK IDVGAGVVDYDYRG VGV+LFNHG EDF+V KGDRVAQLILE+I   E+ E  +L +T RG+GGFGSTGVA++  P  D +A
Sbjct:    6 LRVKRLSDDATMPTRGSEGAAGYDLASAHDCVVPARGKELVKTDLSIAIPLGTYARVAPRSGLAWKKFIDVGAGVVDYDYRGNVGVILFNHGDEDFEVKKGDRVAQLILEQILTPEVVECDDLDDTARGAGGFGSTGVAKDAAPSADASA 155
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: A0A485LLP9_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLP9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.560e-56
Identity = 105/150 (70.00%), Postives = 118/150 (78.67%), Query Frame = 2 
Query:  257 GREVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERIC-MAELEEVTELSETIRGSGGFGSTGVAREPLTD 703
            GREV+  KKL+ +AILPVRGS  AAGFDLASAYE  +PA  +AL+KTDL+IAIP  TYAR+APRSGLA K  +DVGAGV+D DYRG VGVVLFNH  EDF V  GDR+AQLILERI   A +EEV ELSET RG GGFGSTGVA+    D
Sbjct:    2 GREVLLAKKLTAHAILPVRGSNFAAGFDLASAYECVIPAHGKALVKTDLAIAIPSGTYARVAPRSGLAWKNHLDVGAGVIDEDYRGNVGVVLFNHANEDFHVKAGDRIAQLILERIVSQAAVEEVEELSETARGEGGFGSTGVAKRFKAD 151
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BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Match: D8LVR6_BLAHO (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVR6_BLAHO)

HSP 1 Score: 194 bits (493), Expect = 2.540e-56
Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 2 
Query:  263 EVMQVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPPNTYARI-----------APRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKGDRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAR 688
            E++ VKKLSENA +PVRGS HAAG+DL SA + TV A  +ALI TDLS+AIPPN Y R+           APRSGLA+KK IDVGAGVVD DYRGP+G+VLFN G EDF+V KGDRVAQL+LERICMA + EV  L ET RGSGGFGSTGV +
Sbjct:    4 EILYVKKLSENATIPVRGSVHAAGYDLFSAADVTVKARGKALIPTDLSVAIPPNCYGRVGMKCSSLFYFVAPRSGLALKKFIDVGAGVVDCDYRGPLGIVLFNFGDEDFEVKKGDRVAQLVLERICMAPIVEVESLDETSRGSGGFGSTGVKK 156
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16931.3883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G905_ECTSI2.310e-9066.67Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S2XY21_9STRA8.750e-6662.76Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
W7TKM8_9STRA1.530e-6076.71Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A835YUJ2_9STRA8.210e-6050.83Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S1Z1X3_9STRA5.750e-5767.81Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S0DA79_MICPS7.350e-5763.46Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A1Y1IFT1_KLENI1.180e-5670.29Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A4S9G9_OSTLU1.350e-5666.67Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A485LLP9_9STRA1.560e-5670.00Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
D8LVR6_BLAHO2.540e-5667.32Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16931contigH-paniculata_contig16931:2..3847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.8
Seed ortholog evalue2.2e-74
Seed eggNOG ortholog2880.D7G905
Preferred nameDUT
KEGG rclassRC00002,RC00010
KEGG koko:K01520,ko:K21286
KEGG ReactionR02100,R11560,R11896
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00053
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0000287,GO:0001889,GO:0003674,GO:0003824,GO:0004170,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006259,GO:0006260,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010469,GO:0010646,GO:0010648,GO:0014070,GO:0015949,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0023051,GO:0023057,GO:0030545,GO:0030547,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032552,GO:0032556,GO:0033554,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036094,GO:0042221,GO:0042802,GO:0042975,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043497,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051259,GO:0051260,GO:0051716,GO:0055086,GO:0061008,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0098772,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2000272
EggNOG free text desc.dUTP metabolic process
EggNOG OGsCOG0756@1,KOG3370@2759
Ec32 ortholog descriptiondUTPase-like
Ec32 orthologEc-15_002400.1
EC3.5.1.122,3.6.1.23
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Exons5
Model size1369
Cds size870
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929340.5612342-UTR-H-paniculata_contig16931:1..3791622929340.5612342-UTR-H-paniculata_contig16931:1..379Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16931 2..379 -
1691480821.8450408-UTR-H-paniculata_contig16931:1..3791691480821.8450408-UTR-H-paniculata_contig16931:1..379Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16931 2..379 -
1622929340.6290584-UTR-H-paniculata_contig16931:3726..38471622929340.6290584-UTR-H-paniculata_contig16931:3726..3847Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16931 3727..3847 -
1691480821.9010077-UTR-H-paniculata_contig16931:3726..38471691480821.9010077-UTR-H-paniculata_contig16931:3726..3847Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16931 3727..3847 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929340.573906-CDS-H-paniculata_contig16931:379..5171622929340.573906-CDS-H-paniculata_contig16931:379..517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 380..517 -
1691480821.8601213-CDS-H-paniculata_contig16931:379..5171691480821.8601213-CDS-H-paniculata_contig16931:379..517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 380..517 -
1622929340.5842557-CDS-H-paniculata_contig16931:817..9221622929340.5842557-CDS-H-paniculata_contig16931:817..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 818..922 -
1691480821.8688326-CDS-H-paniculata_contig16931:817..9221691480821.8688326-CDS-H-paniculata_contig16931:817..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 818..922 -
1622929340.5950317-CDS-H-paniculata_contig16931:1715..18381622929340.5950317-CDS-H-paniculata_contig16931:1715..1838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 1716..1838 -
1691480821.8787389-CDS-H-paniculata_contig16931:1715..18381691480821.8787389-CDS-H-paniculata_contig16931:1715..1838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 1716..1838 -
1622929340.6061132-CDS-H-paniculata_contig16931:2895..31721622929340.6061132-CDS-H-paniculata_contig16931:2895..3172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 2896..3172 -
1691480821.8861396-CDS-H-paniculata_contig16931:2895..31721691480821.8861396-CDS-H-paniculata_contig16931:2895..3172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 2896..3172 -
1622929340.61865-CDS-H-paniculata_contig16931:3499..37261622929340.61865-CDS-H-paniculata_contig16931:3499..3726Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 3500..3726 -
1691480821.8937142-CDS-H-paniculata_contig16931:3499..37261691480821.8937142-CDS-H-paniculata_contig16931:3499..3726Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16931 3500..3726 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16931.3883.1prot_H-paniculata_contig16931.3883.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16931 380..3726 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16931.3883.1

>prot_H-paniculata_contig16931.3883.1 ID=prot_H-paniculata_contig16931.3883.1|Name=mRNA_H-paniculata_contig16931.3883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MRISFVVLQAAVAATAEAVVQSTAGTGTKGLLWSSPRMIMSVAAEGREVM
QVKKLSENAILPVRGSEHAAGFDLASAYEATVPAGRQALIKTDLSIAIPP
NTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGTEDFKVNKG
DRVAQLILERICMAELEEVTELSETIRGSGGFGSTGVAREPLTDVTAVPN
GYKKFKMQKPQPPLGSEYVQYLLGLIQVLAGILGTESSSAVLTPLRGYAL
KGSFVLGDALEGILDSHAKTNNKRELETDLAIIKKEVLR*
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mRNA from alignment at H-paniculata_contig16931:2..3847-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16931.3883.1 ID=mRNA_H-paniculata_contig16931.3883.1|Name=mRNA_H-paniculata_contig16931.3883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3846bp|location=Sequence derived from alignment at H-paniculata_contig16931:2..3847- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGTCTTTCCCCAAGCGGATTTCCTTTCGTCCCCGTACACCGCTCACCT
GTTCTGTCGTATTTGAGCTAGCGACGGCAGTCTCGTGCCCCATCCTTACG
ATAATCCCATACCCACTCTGCATGCGAATATCGTTCGTCGTGCTCCAAGC
AGCTGTTGCAGCAACTGCAGAGGCTGTTGTGCAATCGACTGCTGGTACCG
GTACAAAGGGGTTGCTGTGGTCATCGCCGAGAATGATCATGTCGGTTGCT
GCTGAAGGTCGCGAGGTTATGCAGGTCAAGAAATTGTCTGAAAATGCCAT
CTTGCCTGTTCGGGGATCTGAGCATGCGGCAGGATTTGATCTTGCCAGGT
GCGTTAGTACTGTCTCCATACAATGCCGTACAGTGGGAAGTGCCATTTGT
ACCTGTAGGGGCTAGACTAGTATTTTGCTGTCTTCGCTGCTCACATTTTG
TAAATTTTGTAACTTTCGCGCCATCGAGGCAGCAGGGTCGTATTCATCCC
ATACCCCCCTTCAAACGTATGTGAAGCGTTTGAGACTATAGCCCGCTATG
GCAGGTTCTCCCATAAACTTCCAACGGTCTATTGGTAAGTAGCTGATGTC
TATGCGGAGGAGAACGACTAATTATTAGTTATAGCATACTTTGTTCCTGC
ATATGCACTTGTTTGCGAAACTCAGCGCGTACGAGGCGACAGTGCCAGCG
GGACGGCAAGCTCTCATCAAGACCGACCTCTCCATCGCAATCCCCCCTAA
CACATACGCGCGGATTGCGCCACGATCCGGTCTGGCGGTAAAGAAAATGA
TTGATGTTGGTGCGGGAGTGGTGGACTATGATTATCGCGGCCCGGTAGGC
GTGGTGCTGTTCAACCATGGAACCGAGGATTTCAAGGTGAACAAGGGAGA
TCGAGTTGCGCAACTAATCCTGGAGCGTATCTGCATGGCGGAATTGGAGG
AGGTGAGCGTGGTCGGGGGTCGGAGGTGGGTGGTGAATGGCAGGAGGATA
AGGTAATAGGGTCATCAGGGGGCACCTCTTCAACTCAAAGCTGTTAGTTC
GACTGTACACCTCGTAACTTCGAAATAGGAAATCTAAAAATAGTCTCGTC
TACTCAAGTCACGGCAAGTCTAGCGAGGTACATATATCGAGCGAAACTTG
AACCTTAAATGTGTCCATGTGCTAGAGGAAGGATGTGGAAGCAGCGGAAA
AGGTTTTTGCCTCAGCCTTCCGGGGGTTCAAAAAAAAAAAATGTGCTAGA
GGGAGCCAGTCACGGCGAGCACAGCAAGTGCGTGTTCGTGGTTTACTGGG
GAAAACTTACAAGAGGTGATCTACTAAATGTATTGAACAACAATTAAAAT
AAAATGCCAAGATCTATATGGAAAACATCTTGTATTAATAAAAGCCATTT
TTGAAGGTTAATTTTTGAATAAAAATAAACCAACCTGGTCTCGGAGGTCA
CCAACATGTCCACCTATTGTTGGGCTGCAATTACCTAAATACAATGGTGA
AGAAATGGTAACTTTGGGTTAGAGCTACAGCGATATCGTCCCCGCCGCCG
CTTTCGTAGCCGTGACCCGTCTCGTAGTATAAATCAAGTACATGAATCTT
TCACGATGGATAAAAAATGGATCGGATGGCGCGCTAGGGATTGGAGCGGG
GAACCAAATTTTCTGTCGCGAGACGAAATCGCTTGTATTTTCTTCTTGCT
TCGTTCACATTTTATCATCCTATCCGTCTTACCCACCCGCTGAGCTGGTG
TCTGGCTCGCCCGTTACTGTCACAGACAACGCCGTAGAGTGAATTTCGGC
CGCTCATTCCTACCCTCGGTCAAGTATTTGAGTTCAATAATTTGCAGAGA
CTCGACAGCTGCGGCGTTCAACTTTGGCGGGGTGACACAGCGGAGGGTGG
AACCCATCCACGTCCTAGTTCAGCGCCCCTCGTTTCTGATGCTTACCGTT
CATCTTCGATCATGTATATTTACTTTTGCTATGTCGTAACATATTGTCTT
GCTTTGCAGGTAACTGAACTCTCGGAAACAATCAGGGGTAGCGGCGGGTT
CGGCAGCACTGGGGTTGCGCGAGAGCCGCTTACCGACGTGACGGCTGTAC
CAAATGGGTACAAAAAGTTCAAAATGCAAAAGGTGATCTCCCCTATCTGC
GGTAGTTGTTTTCAAGCATTCCGCATTAAATGTCAGCGATATCCGCTGAC
ATGCCGTTGTACGCGAGCCACCTGGCTAGTCAGCCTTCACCGCATAACCC
TACAATTTCCCGATTTGTTCATTGTTTCAACAAGCTATGTGCCGTACGTA
CAAGGAGCTCCTGATTTTCTGGGTGCGATTCCCCAACTTTGCGGAAATGA
GGCCTGTCTTGTCGCACTGCAGTGTTTCGTAGACATGCGCCAGCTATCTC
AATTCACCACTGCCCACATGATGAATATCCCTTCTACCCAGCATCATATT
GTTCATCGTCTAGACGCCTCAAATATTGCACTGCTTCTTACTGTAGTCTG
CTATTCTGCTTTCCGATTACGGAAATGTTGTAACATGGAAGAAGTTCCCC
CCTCGGCCATCGCGGAAACTACCTGTATAAGATAGTTCAGCGTCACTCAG
TAGGTGTCATGACGTGATCGTTCCGAAGTCTTCTTCCATCTAATATTTTC
AGCCAGTGCTTTTCGGCGACCACTACCACACGCTCGGAGGTGTTTTTGCC
TGTAGGGTAGCCTTTCCTTTGTTCCTGTGGACCTAATCTGTGAGGCTTCA
TGTGGACCGAATAAATTCGAATGGTGTTGCACACTTTACTATTGTCGACA
CGATGTTCCTTTCATGTCCTGTGACGGTTCGAACATCCGTGGCAGCATAC
ATTCACGTCGCGGTTTGGTGACGTTACTCGTCGCCCACTTAATGCCAATG
TTGACTTGTTCTGTTGCATGTGCAGCCACAACCCCCACTGGGCAGCGAGT
ACGTCCAGTACCTACTTGGGCTTATACAGGTGCTTGCCGGAATTCTCGGT
ACGGAGTCCAGTTCCGCTGTATTAACACCGGTAAGTGGGATGTGCTGTGC
TGCGCATACCGTTGAATAATTAACTGTGAGCATATGCGCAATCGTTGTCG
CTGTTGATTGGTTGCCTCTACACAGGGAGGTTGTCGTCCTCGCAGGATGT
CGTGTACCAGCTGTTACACAAAGTGTGGAACAATCTCGTATAAGGTCTAC
CTTGTTGCGCTCTGTCGACCATGTGGAATAGACCATTTGTTTTTCGATGT
CTTCGCGAGGGAAGGCCGCGCCGAGACTTACGTACCGCAATTTCAACGTG
CTTAATTCGACTTTTTCGCTTTTTGGGCAGCTGCGTGGATATGCTCTCAA
AGGAAGTTTTGTCTTGGGGGACGCTTTGGAGGGGATTCTGGACAGCCATG
CGAAGACCAACAACAAGAGAGAATTGGAAACTGATTTAGCTATCATCAAG
AAAGAAGTACTTCGCTAACTATTGCTCACTAGGCTAGTACACGAAAAAAA
AACACCGGCGGATACAAGCCATTGTGTCGAATTCGCTCCTAGAGTGAGAA
GTAGAGGTTGGGTGGCGACCCGGTGTATACAGTTGCAGTTGAAAGTACGT
ATAGCGAAGAGAAATAGTAACGGCGAAGGTCCACGGTGTGGTTCTTGCTT
GTTAGCTTTATATTTACGTCACATAATAGTTTGGTGGTCGGCTTTATGTT
TTTTTCCAGTTCTTGTCTTCCCAACGATGAGGAGCTTTGGATGGAGTCCA
GAGAGAAAAATCCGTCCGGAGCGACGGACCTACGCCCGAACGGGTAGGGT
AGCTCGTATACTGAGCATGACTGGAAGTCTAGTCAGAGGTCTTTTA
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Coding sequence (CDS) from alignment at H-paniculata_contig16931:2..3847-

>mRNA_H-paniculata_contig16931.3883.1 ID=mRNA_H-paniculata_contig16931.3883.1|Name=mRNA_H-paniculata_contig16931.3883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at H-paniculata_contig16931:2..3847- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAATATCGTTCGTCGTGCTCCAAGCAGCTGTTGCAGCAACTGCAGA
GGCTGTTGTGCAATCGACTGCTGGTACCGGTACAAAGGGGTTGCTGTGGT
CATCGCCGAGAATGATCATGTCGGTTGCTGCTGAAGGTCGCGAGGTTATG
CAGGTCAAGAAATTGTCTGAAAATGCCATCTTGCCTGTTCGGGGATCTGA
GCATGCGGCAGGATTTGATCTTGCCAGATGCGAATATCGTTCGTCGTGCT
CCAAGCAGCTGTTGCAGCAACTGCAGAGGCTGTTGTGCAATCGACTGCTG
GTACCGGTACAAAGGGGTTGCTGTGGTCATCGCCGAGAATGATCATGTCG
GTTGCTGCTGAAGGTCGCGAGGTTATGCAGGTCAAGAAATTGTCTGAAAA
TGCCATCTTGCCTGTTCGGGGATCTGAGCATGCGGCAGGATTTGATCTTG
CCAGCGCGTACGAGGCGACAGTGCCAGCGGGACGGCAAGCTCTCATCAAG
ACCGACCTCTCCATCGCAATCCCCCCTAACACATACGCGCGGATTGCGCC
ACGATCCGGTCTGGCGGTAAAGAAAATGATTGATGTTGGTGCGGGAGTGG
TGGACTATGATTATCGCGGCCCGGTAGGCGTGGTGCTGTTCAACCATGGA
ACCGAGGATTTCAAGGTGAACAAGGGAGATCGAGTTGCGCAACTAATCCT
GGAGCGTATCTGCATGGCGGAATTGGAGGAGCGCGTACGAGGCGACAGTG
CCAGCGGGACGGCAAGCTCTCATCAAGACCGACCTCTCCATCGCAATCCC
CCCTAACACATACGCGCGGATTGCGCCACGATCCGGTCTGGCGGTAAAGA
AAATGATTGATGTTGGTGCGGGAGTGGTGGACTATGATTATCGCGGCCCG
GTAGGCGTGGTGCTGTTCAACCATGGAACCGAGGATTTCAAGGTGAACAA
GGGAGATCGAGTTGCGCAACTAATCCTGGAGCGTATCTGCATGGCGGAAT
TGGAGGAGGTAACTGAACTCTCGGAAACAATCAGGGGTAGCGGCGGGTTC
GGCAGCACTGGGGTTGCGCGAGAGCCGCTTACCGACGTGACGGCTGTACC
AAATGGGTACAAAAAGTTCAAAATGCAAAAGGTAACTGAACTCTCGGAAA
CAATCAGGGGTAGCGGCGGGTTCGGCAGCACTGGGGTTGCGCGAGAGCCG
CTTACCGACGTGACGGCTGTACCAAATGGGTACAAAAAGTTCAAAATGCA
AAAGCCACAACCCCCACTGGGCAGCGAGTACGTCCAGTACCTACTTGGGC
TTATACAGGTGCTTGCCGGAATTCTCGGTACGGAGTCCAGTTCCGCTGTA
TTAACACCGCCACAACCCCCACTGGGCAGCGAGTACGTCCAGTACCTACT
TGGGCTTATACAGGTGCTTGCCGGAATTCTCGGTACGGAGTCCAGTTCCG
CTGTATTAACACCGCTGCGTGGATATGCTCTCAAAGGAAGTTTTGTCTTG
GGGGACGCTTTGGAGGGGATTCTGGACAGCCATGCGAAGACCAACAACAA
GAGAGAATTGGAAACTGATTTAGCTATCATCAAGAAAGAAGTACTTCGCT
AACTGCGTGGATATGCTCTCAAAGGAAGTTTTGTCTTGGGGGACGCTTTG
GAGGGGATTCTGGACAGCCATGCGAAGACCAACAACAAGAGAGAATTGGA
AACTGATTTAGCTATCATCAAGAAAGAAGTACTTCGCTAA
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