mRNA_H-paniculata_contig1693.3880.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI) HSP 1 Score: 659 bits (1700), Expect = 5.930e-224 Identity = 393/781 (50.32%), Postives = 463/781 (59.28%), Query Frame = 1
Query: 1 TCCAFCGENFASRSALFRHLQRQADGCSAPRLDPGEKVMLLFGYRCCSIATVGGTAAEAKRGRGEDGGGNAVVVLSG---------INDASASAASVVAGGDSAGERILEAMGISGFEERTAGVNGAG--------AKPVGFSQASSVGSRRCPLLAQELGVSATADTVCLKAPTTVPVTGIRAWLHETNMALAGS------GVKILGRMRVPHDLHAEAHATRRRYEYLIPAWLLDATAEGPWTGPARGEDTLIPLLKDVRALSFKPFGSCNVLIDGKRRRRRPLWHNFSAEALPHSPSAARRLYRYYSHSTVI------------IRDVDYVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVGYSTWQTKLG----GVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARWWASQPTLGVDWLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKK----------------------LSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHGGSFTVGSFPPPCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEALA 2160
T C+FC E F +RSA+FRHL+R C APR D GEKV+L+ GY +++ G+ GG AV + + +S +AA+V GG SA +L+AMGI R ++P GFSQASSVGSR CPLLAQE VSATADT+CL+APTTVP GIR WL +TN AL S +++LGRM VP HAE HA RRRYEYL+PAW+LD TAEGPW GP RG++ LIPLL+ +RA +PFG CN DG RRR PLWHNFSA ALPHSPS+ RRL+R+Y+ + DYVC+SI+GDAF+ +QVRGMV LAVA ARGLI AE IAA IDPTRQED+ VPLAP PC LAEVGYS WQ +LG GVCMSP A +R PLEGWSDEA+RS G FR+ V +SAARWW + GV WL DVL+PGA KL E+ ++ RA D +N RG + LS + L P +Y +VL LLREA SG WP ST +R VI G XXX SFT+G+FPPPCPPPRGN LF EL RAAFELEA LLP+RPPSTTIAVNR+A+F+PH+DSG+GAGQS SLIVGLGDYV G+LVVEGEE DIRY PLEFNGWTQRHWTRPF GER+SLVWFTPKGCE ++
Sbjct: 33 TTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLVVGY-------------DSRLMAGDKGGEGAVTPPTSDTYNMPTPPVGTSSGTAAAV--GGASAASSVLKAMGIEVERRRDXXXXXXXXXXXQSYCSRPGGFSQASSVGSRTCPLLAQEEEVSATADTICLRAPTTVPQEGIRKWLDDTNAALDNSDGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRC-PLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQEDLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDG-GVGWLKDVLQPGAVKLGREVQVSDMRAGDLEGDRSN-EGRGEEDGCGGRSGSRDESRRGAGADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRADEMCSGTGRSKQTDLAGCAKGRDSDKTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXX-----SFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGIS 790
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA) HSP 1 Score: 291 bits (746), Expect = 8.490e-84 Identity = 265/773 (34.28%), Postives = 335/773 (43.34%), Query Frame = 1
Query: 7 CAFCGENFASRSALFRHLQRQADGCSA---------PRLDPGEKVMLLFGYRCCSIATVGGTAAEAKRGRGEDGGGNAVVVLSGINDASASAASVVAGGDSAGERILEAMGISGFEERTAGVNGAGAKPVGFSQASSVGSRRCPLLAQELGVSATADTVCLKAPTTVPVTGIRAWLHETNMALAGSGVKILGRMRVPHDLHAEAHATRRRYEYLIPAWLLDATAEGPWTGPAR---------GEDTLIPLLKDVRALSFKPFGSCNVLIDGKRRRRRPLWHNFSAEALPHSPSAARRLYRYYSHSTVIIRDVDYVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARW---------------------------------WASQPTLGVDWLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKKLSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPH----------GGSFTVGSFPPPCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPK 2142
C C + F +R+ALFRHL C A G K+ LLFGY G +++A AV + G + G+ P G + ASS + LAQE V+A AD + +R L + N L GV++LG M V D HAE A RRRY+YL+P LL A+ + GE + +++ ++ L + +G + +R RR HNF A P P A RRL+R+ + +R V +S++ +AF+ +Q R MVGL +A ARG + + I A +D E M P AP LAEVGYS + G +SP W + G W++ L+ LRA L R + A + P+ LS +E L P+VY VLRLLREAD SGLWP S+ R +VI GA XXXXXXXXXXXXXXXXXXX GGSF+VG P C PRGN LFPEL RAAFELE +L+P+R PS+TIA+NRHAQFRPH DSG G+GQS+SLIVGLGDY G+LVVEG E DIRY PLEFNGWTQRHWT PF+GER+SLVWFTPK
Sbjct: 5 CKLCAQPFDTRNALFRHLLDLNTECGAFCASKGMKSTATTRGRKIALLFGYH--------GVSSDA-----------AVAAIWGA------------------------------------ITGSTEPPDGLTAASSWIASNNRALAQEPEVAAVADVMTFNM--------LRGSLSDVNARLP-RGVRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYGGTD------QRGRRVCCHNFCASTAPTEPIATRRLFRFKHTDSAALRGRACVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALDAQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFG--LSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFL----QRWRDSKQLAQSGPPQPPLSLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIANGAAAAVGEEDESEEQVPAEAAAVELLVPAQLATSGPGATVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPK 701
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO) HSP 1 Score: 261 bits (666), Expect = 2.080e-72 Identity = 235/809 (29.05%), Postives = 342/809 (42.27%), Query Frame = 1
Query: 7 CAFCGENFASRSALFRHLQRQADGCSAPRLDPG----------EKVMLLFGYRCCSIATVGGTAAEAKRGRGEDGGGNAVVVLSGINDASASAASVVAGGDSAGERILEAMGISGFEERTAGVNGAGAKPVGFSQASSVGSRRCPLLAQELGVSAT-ADTVCLKAPTTV-PVTGIRAWLHETNMALAGSGVKILGRMRVPHD---LHAEAHATRRRYEYLIPAWLL------------------DATAEGPWTGPARGEDTLIPLLKDVRALSFKPFGSCNVLI--------------DGKRRRRRPL--------------------WHNFSAEALPHSPSAARRLYRYYSHSTVIIRDV--DYVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARWWASQPTLGVD----------WLNDVLRPGATKLRAELA-------AANNRAARAAADAANVHPRGRKKLSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHG-----GSFTVGSFPPP-CPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEAL 2157
C CGE F SRSA+FRHL+ + C + G KV+LL+GY C + G A +++L+ V G KP +++ + RR L+ Q+ G ++ + + P+ + PV W+ N L G+ ++GR + +AE T RR EY++P L D T + + + +K + L K +I + +++ +RP +HNF+ + H A RR+ R Y +T+ ++ +S++GD F+ QV ++G+ +A ARGL+D + + C+ + + P AP E Y W+ K+ V +SP A R + EGW+D T ++ V+E AR W T G D W VL P + + +L A+ + ++AA+ + + P L++ + P V+ +VLR LREAD SGLWP++TP R V+ K+++ + A G GSF+VG+ P C P+GN+LFPEL +AAFELE +L PDR PS+TIA+NR+AQFRPH DSG GAGQS SLIVGLG Y G+LVVEGE+ DIRY +EFNGWTQRHWT PFKGERFSLVWFTPKGCE +
Sbjct: 6 CHGCGEEFPSRSAIFRHLKETSGQCLSKEEYQGYLQYLQEQDRHKVLLLYGY--CGLE-----------------------------------------GTEAAQKLLKI------------VQGEDVKPDKINRSYANIGRRTQLVKQDEGTGGVISEVLATRLPSILEPVDN---WIDRMNTQLEPEGIYLIGRHEMKGKGGTFNAEIDVTHRRVEYMLPLDFLYCSNIENMSRDEFFDTLPDFTETSEYVSKVGRDYPTLATVKYLFGLKRKMQSLTTQIIPMDADEHDSSAKKMEREQQSKRPKSQQKSKNGNKPKTNLLKRRRFHNFTPSCMAHEYVAYRRMDRVYHRATIRFDGERRPFLVLSLTGDLFLHGQVCRVIGVFLALARGLVDQDMVE-CLFDEKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVKAV-LSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWL---TGGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQASLVVSRKSAAEVSELIP----SLNLVDP----TVPAVFEKVLRCLREADASGLWPSTTPKRQMVM-------------------------------------------ISSLTDPNATDEDFLPNSLADAHGKAKNNKGQRSSAYIFAEGEGGASGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGV 697
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS) HSP 1 Score: 252 bits (644), Expect = 9.790e-69 Identity = 184/503 (36.58%), Postives = 243/503 (48.31%), Query Frame = 1
Query: 766 KRRRRRPLWHNFSAEALPHSPSAARRLYRYY------------------------SHSTVIIRDVDYVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLA--EVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQA-VQESAARWWASQPT----LGVD--WLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKKLSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHG-----GSFTVGSFPP-PCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEAL 2157
KR RR +HNFS L H A RRL R Y + ST I+++ ++ S++GD F+ Q R ++GL +A RG+ID+E I D +E VP P P C L E Y TW+ +L + +SP R +GW++E S + ++ V++ AA W + T L + WL+DVL P ATK R L R A +++ + + L + P++Y +VL LR AD SG WP +TP R V+ + K L + A G GSF+VG+ P C P+GN LFPEL +AAFELE L P R PS+TIA+NR+AQFRPH D+G GAGQS SLIVGLGDYV G+L+VEG + DIRY P+EFNGW QRHWT PF+GERFSLVWFTPKGC+ +
Sbjct: 344 KRLLRRKRFHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDSEIIECMFD---EEYANLVPAPPAPSCGLVAGESTYMTWEGRLKTI-LSPRRCDRYD---KGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENYWLDDVLNPWATKTRVILDD-YRRWKTAKEESSAIDGTLAESLLPPVSSIDTMVPELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVAMHVA-------------------------------------------------KKKNDLRSDAYTFQEGEGGASGSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGV 789
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC) HSP 1 Score: 241 bits (615), Expect = 9.920e-65 Identity = 169/493 (34.28%), Postives = 235/493 (47.67%), Query Frame = 1
Query: 763 GKRRRRRPLWHNFSAEALPHSPSAARRLYRYYSHSTV-----------IIRDVD----YVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARWWASQPTLGVD----------WLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKKLSVSEE--QFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHGGSFTVGSFP-PPCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEAL 2157
G+ RR +HNF+ L H A RRL R Y +T+ + ++ + ++ +S+SGD F+ QV +VGL +A ++G+ID E C+ + P AP + E Y + + G C + ++ +GW+D+ T ++++Q V+ AA W + LG D W +VL P A + + +L + + G + ++ +A P ++ +VLR LR+AD SG WP++TP R V+ + +E A+ GSF+VG+ P C P+GN LFPEL RAAFELE L P+R PS+TIA+NR+AQFRPH DSG GAGQS SLIVGLG Y G+LVVEGE+ DIRY LEFNGW QRHWT PF GERFSLVWFTPKGCE +
Sbjct: 336 GQNVLRRKRYHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVID-EDFCDCVFDEAYPHLVSTPAAPTTGMYAGEAYYMSME----GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMA---LGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVLHATTGGAETRALEPPIASIETAIPSLFEKVLRYLRDADKSGFWPSTTPKRQLVM-----------------------------VSTVVEGKSESCDNPFESGAMPASLSVAHMKARSNKIDKSSAYIYVEGEGGAS---GSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGV 788
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A7S2LQZ1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQZ1_9STRA) HSP 1 Score: 233 bits (595), Expect = 4.230e-64 Identity = 173/485 (35.67%), Postives = 232/485 (47.84%), Query Frame = 1
Query: 766 KRRRRRPLWHNFSAEALPHSPSAARRLYRYYSHSTVIIRDVD--------------YVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARWWA-------SQPTLGVDWLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKKLSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHGGSFTVGSFPPPCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEAL 2157
KR RR +HNFS L H A RRL R Y T+ + +V S++GD F+ +Q R ++GL +A RG ID + + D E+ H+ APL P G +T+ T G + M A + A +G++DE + + ++V + A+ W Q DWL VL P A K R EL N R +A A+++ P +SV ++ P VY + L+LLREAD +G WP ++ R V+ S K+ E + GSF+VG P P+GN FP+L +AAFELE L PDR PS+TIA+NR+AQFRPH D G GAGQS SLIV +G++V G+L+VEGE+ DIRY +EFNGW QRHWT PFKGER+SLVWFTPKGCE +
Sbjct: 94 KRFLRRKRFHNFSPNVLAHDFLAYRRLDRIYHRGTIRLDSTTQDGSESVLHTGSRPFVVFSLTGDLFLYQQARRVIGLLIAILRGCIDIDILDLVFD----ENYAHLVSAPLAPSLGLMQGEATYMTYEGRLNMVLNARRTRAFS-KGFNDEDVVTSVEQWEESVLKDIAKGWYLDGTGANGQLNAERDWLETVLYPWAKKARDELD--NYRRWKAGELASSLPP----VVSVG-----TSVPDVYVKCLQLLREADANGAWPDTSAQRQLVM-----------------------------------LSTPNDESLTTSLTAARMAAKTNNSESRSCAYSFKEGEGGAS--------GSFSVGIMPDRSSQPKGNLQFPQLVKAAFELERALFPDREPSSTIAINRNAQFRPHTDKGAGAGQSTSLIVAMGNFVGGELMVEGEKKDIRYNGIEFNGWKQRHWTLPFKGERYSLVWFTPKGCEGM 519
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.440e-63 Identity = 177/512 (34.57%), Postives = 236/512 (46.09%), Query Frame = 1
Query: 772 RRRRPLWHNFSAEALPHSPSAARRLYRYYSHSTVIIRDVD----------------------------YVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHV---PLAPLPPCWLAEVGYSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEATRSVGFAFRQAVQESAARWWASQP----------TLGVDWLNDVLRPGATKLRAELAAANNRAARAAADAANVHPRGRKKLS-------VSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHGGSFTVGSFP-PPCPP-PRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCEAL 2157
RRRR +HNF+ + H + RRL R + +T+ D ++ +S+S D F+ QV +VGL VA ARGLID + + D E+ H+ P APL + + Y +W+ K V +SP R GW+D AT A++ V++ A + W ++ L +W +L P A K R L + R P +S +S P+V+ VL LL+EAD SG WP++TP R V+ S + E+ + A GSF+VGS P CP P+ N+LFP+L +AAFELE L PDR PS+TIA+NR+AQFRPH DSG+GAGQS SLIVG+G Y G+LVVEGE+ DIRY +EFNGWTQRHWT PF GER+SLVWFTPKGCE +
Sbjct: 64 RRRR--YHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLIDKDFVECVFD----ENYLHLVPTPPAPLIGMYSKDAFYMSWEGKAKSV-LSPRQTDRYPG---GWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHL-----QDYRQWKSLQGKTPLSDSSISQMVSNNIISNSSLDPTVPKVFQRVLSLLQEADKSGSWPSTTPKRQLVM------------------------VSNHVDSGKDGDKDTSNPFQSYQQPKSLSVAHMKAKSNRDIRSSAYEFEEGQGGAS-----GSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGI 531
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A7S2NHH0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2NHH0_9DINO) HSP 1 Score: 207 bits (526), Expect = 3.500e-58 Identity = 96/126 (76.19%), Postives = 104/126 (82.54%), Query Frame = 1
Query: 1774 GGSFTVGSFPPPCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCE 2151
GGSF+VGS PPP P GN LFPEL AFELE LLLP RPPS+TIA+N+HAQF PH+DSG GAGQ VSLIVGLGDY G+LVVEG +DIRY P+EFNGWTQRHWT PF GERFSLVWFTP GCE
Sbjct: 77 GGSFSVGSMPPPLQAPAGNRLFPELAARAFELEGLLLPGRPPSSTIAINKHAQFLPHVDSGAGAGQGVSLIVGLGDYAGGELVVEGSALDIRYTPVEFNGWTQRHWTLPFSGERFSLVWFTPLGCE 202
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A7S1BDW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDW6_9STRA) HSP 1 Score: 201 bits (511), Expect = 9.010e-57 Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 1
Query: 1777 GSFTVGSFPP-PCPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFSLVWFTPKGCE 2151
GSF+VG P C PP+GNTLFPELT+AAFELE +L P+RPPS+TIA+NR+AQFRPHIDSG GAGQS SLIVG+G Y G+LVVEG+ DIRY PLEF+GWTQRHWT PF GERFSLVWFTPKGCE
Sbjct: 31 GSFSVGIMPGIGCEPPKGNTLFPELTKAAFELEQVLCPNRPPSSTIAINRNAQFRPHIDSGAGAGQSTSLIVGIGAYSGGELVVEGKREDIRYRPLEFDGWTQRHWTLPFTGERFSLVWFTPKGCE 156
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Match: A0A7S4QKS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKS2_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.250e-56 Identity = 162/487 (33.26%), Postives = 230/487 (47.23%), Query Frame = 1
Query: 778 RRPLWHNFSAEALPHSPSAARRLYRYYSHSTVIIRDVD---------------------YVCVSISGDAFVDRQVRGMVGLAVAAARGLIDAEQIAACIDPTRQEDMFHVPLAPLPPCWLAEVG--YSTWQTKLGGVCMSPAAAKRLAHPLEGWSDEAT-RSVGFAFRQAVQESAARWW-------ASQPTLGVDWLNDVLRPGATKLRAELAAANN--RAARAAADAANVHPRGRKKLSVSEEQFLSATPQVYTEVLRLLREADVSGLWPASTPARDSVIQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDHEQLEAPAQAAPHG-----GSFTVGSFPPP-CPPPRGNTLFPELTRAAFELEALLLPDRPPSTTIAVNRHAQFRPHIDSGTGAGQSVSLIVGLGDYVEGQLVVEGEEVDIRYCPLEFNGWTQRHWTRPFKGERFS 2121
+R +HNF++ + H A RRL R++ +TV + ++ ++++GD F++ Q R ++ L +A RG ID E I C+ ++ VP+ PLP + G Y +W+ K+ + +SP A G++DE T RSV +E A+ W + W +VL+P A K + +L A R +D+ + L+ S E ++ P ++ +VL+ LREAD SGLWP +TP R V+ K ++++ + A A G GSF++G+ P P+GNTLFPEL +AAFELE L P+R PS+TIAVNR+AQFRPH DSG GAGQS SLIVGLG Y G+L+VEGE+ DIRY +EFNGW QRHWT PF GERFS
Sbjct: 64 KRKRFHNFTSTVMAHEFLAYRRLDRFFHRATVRFDENGAADKEEELPEGSNNAFHSKRPFLALTLTGDLFLNGQARRVIALFLAICRGCID-EDILDCVFDEEYTNL--VPIVPLPSFGMYAEGSTYMSWEGKIKAI-LSPRKADLYDR---GFNDEDTIRSVEHFQHDVFREVASAWCRKGEDNVTGRLVSEQKWTEEVLQPWAVKAKEQLQDYRKWKEAKRLVSDSNTETEMVAETLAPSLESVDTSVPHLFQKVLKYLREADSSGLWPTTTPKRQLVM--------------------------------VSTKEEDATGTQNDNNGSDTIVSPKINTSLSAAHMRAKSNKEIRSSAYAFVEGQGGASGSFSIGAMPKKQSEQPKGNTLFPELMKAAFELEIALCPEREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYTGGELMVEGEKKDIRYKAIEFNGWKQRHWTLPFHGERFS 511 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1693.3880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1693.3880.1 >prot_H-paniculata_contig1693.3880.1 ID=prot_H-paniculata_contig1693.3880.1|Name=mRNA_H-paniculata_contig1693.3880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=749bp MLLFGYRCCSIATVGGTAAEAKRGRGEDGGGNAVVVLSGINDASASAASVback to top mRNA from alignment at H-paniculata_contig1693:1775..4631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1693.3880.1 ID=mRNA_H-paniculata_contig1693.3880.1|Name=mRNA_H-paniculata_contig1693.3880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2857bp|location=Sequence derived from alignment at H-paniculata_contig1693:1775..4631- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1693:1775..4631- >mRNA_H-paniculata_contig1693.3880.1 ID=mRNA_H-paniculata_contig1693.3880.1|Name=mRNA_H-paniculata_contig1693.3880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4494bp|location=Sequence derived from alignment at H-paniculata_contig1693:1775..4631- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |