prot_H-paniculata_contig16913.3873.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16913.3873.1
Unique Nameprot_H-paniculata_contig16913.3873.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
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BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: F0XW64_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW64_AURAN)

HSP 1 Score: 146 bits (369), Expect = 1.600e-40
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0 
Query:    1 MTPIRHFLA-HGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNLIKLWDPRTGNSLSTLYGHKNTVV 100
            MTP++  L  H    +RGL F P+D+KF SC+DD TVRIWDWE ++EER L GHGWDVKT  WHP   LI SGSKDN +K+WDPR  + ++TLYGHK+TV+
Sbjct:  101 MTPMKEILGTHQGQAVRGLDFAPSDAKFCSCADDGTVRIWDWELFQEERILAGHGWDVKTCAWHPSYQLIASGSKDNQVKMWDPRKRSCVATLYGHKHTVM 201
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BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A6H5JUK6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK6_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.770e-39
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFK 66
            MT ++HF+AHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHP+K
Sbjct:    1 MTAVQHFIAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPYK 66
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BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A3S1BDQ9_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BDQ9_ELYCH)

HSP 1 Score: 140 bits (353), Expect = 1.350e-36
Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ F AH   PIRG+SF PTDSKFASCSDD TVR+WD+    EER L GHG DV+ V+WHP KSL+ SGSKDN   +KLWDPRTGNSL+TL+ HK+TV+
Sbjct:  227 MNNVKMFQAH-KEPIRGISFCPTDSKFASCSDDGTVRVWDFMRCHEERILRGHGADVRCVDWHPQKSLLASGSKDNQQPVKLWDPRTGNSLATLHAHKHTVM 327
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BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: G4T5A0_SERID (Polyadenylation factor subunit 2 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4T5A0_SERID)

HSP 1 Score: 135 bits (339), Expect = 2.900e-36
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 0 
Query:   15 IRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNLIKLWDPRTGNSLSTLYGHKNTV 99
            IRG+SF P D++F +CSDDST++IW +   +EER LTGHGWDV+ V+WHP K L+ SGSKDNLIK WDPRTG  L+TL+ HKNT+
Sbjct:   28 IRGISFSPNDARFVTCSDDSTLKIWAFNESREERTLTGHGWDVRCVQWHPSKGLLASGSKDNLIKFWDPRTGTCLTTLHQHKNTI 112
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BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A0P4VK08_9HEMI (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=2 Tax=Rhodnius TaxID=13248 RepID=A0A0P4VK08_9HEMI)

HSP 1 Score: 137 bits (344), Expect = 7.220e-36
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ FLAH    IRG+SF PTDSKFASCSDD TV+IWD+   +EER L GHG DVK + WHP K LI+SGSKDN   +KLWDP+TG SL+T++ HK+TV+
Sbjct:  159 MNNVKMFLAH-QEAIRGISFSPTDSKFASCSDDGTVKIWDFYRCQEERILRGHGADVKCIHWHPQKGLIISGSKDNQQPVKLWDPKTGTSLATIHAHKSTVM 259
[Close]
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A023F3M6_TRIIF (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=2 Tax=Triatoma infestans TaxID=30076 RepID=A0A023F3M6_TRIIF)

HSP 1 Score: 137 bits (344), Expect = 2.170e-35
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ FLAH    IRG+SF PTDSKFASCSDD TV+IWD+   +EER L GHG DVK + WHP K LI+SGSKDN   +KLWDP+TG SL+T++ HK+TV+
Sbjct:  204 MNNVKMFLAH-QEAIRGISFSPTDSKFASCSDDGTVKIWDFYRCQEERILRGHGADVKCIHWHPQKGLIISGSKDNQQPVKLWDPKTGTSLATIHAHKSTVM 304
[Close]
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A0A9XQF1_LYGHE (Pre-mRNA 3' end processing protein WDR33 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XQF1_LYGHE)

HSP 1 Score: 136 bits (343), Expect = 2.940e-35
Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ F+AH    IRG+SF P DSKFASCSDD T++IWD+   +EERAL GHG DVK V WHP K LI+SGSKDN   +KLWDP+TG SL+T++ HK+TV+
Sbjct:  207 MNNVKMFMAH-QEAIRGISFSPLDSKFASCSDDGTIKIWDFYRCQEERALRGHGADVKCVHWHPHKGLIISGSKDNQQPVKLWDPKTGTSLATIHAHKSTVM 307
[Close]
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A0A9XKI4_LYGHE (Pre-mRNA 3' end processing protein WDR33 n=4 Tax=Mirini TaxID=236659 RepID=A0A0A9XKI4_LYGHE)

HSP 1 Score: 136 bits (343), Expect = 2.990e-35
Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ F+AH    IRG+SF P DSKFASCSDD T++IWD+   +EERAL GHG DVK V WHP K LI+SGSKDN   +KLWDP+TG SL+T++ HK+TV+
Sbjct:  207 MNNVKMFMAH-QEAIRGISFSPLDSKFASCSDDGTIKIWDFYRCQEERALRGHGADVKCVHWHPHKGLIISGSKDNQQPVKLWDPKTGTSLATIHAHKSTVM 307
[Close]
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: A0A8I6RUI8_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RUI8_CIMLE)

HSP 1 Score: 136 bits (342), Expect = 3.960e-35
Identity = 61/102 (59.80%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  ++ F+AH    IRG+SF PTDSKFASCSDD T+++WD+   +EER L GHG DVK V WHP K LI+SGSKDN   +KLWDP+TG SL+T++ HK+TV+
Sbjct:  209 MNNVKMFMAH-QEAIRGISFSPTDSKFASCSDDGTIKVWDFYRCQEERTLRGHGADVKCVHWHPQKGLIISGSKDNQQPVKLWDPKTGTSLATIHAHKSTVM 309
[Close]
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Match: UPI0008F996B1 (pre-mRNA 3' end processing protein WDR33 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F996B1)

HSP 1 Score: 136 bits (342), Expect = 4.090e-35
Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 0 
Query:    1 MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPFKSLIVSGSKDNL--IKLWDPRTGNSLSTLYGHKNTVV 100
            M  I+ F AH    IRG+SF PTD KFASCSDD T+RIWD+    EER L GHG DVK ++WHP K LI+SGSKDN   IKLWDP+TG +L+TL+ HKNTV+
Sbjct:  217 MNNIKMFPAH-KEAIRGISFSPTDDKFASCSDDGTIRIWDFYQCHEERILRGHGADVKCIDWHPQKGLIISGSKDNQQPIKLWDPKTGQALATLHAHKNTVM 317
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16913.3873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0XW64_AURAN1.600e-4060.40Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5JUK6_9PHAE9.770e-3992.42CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A3S1BDQ9_ELYCH1.350e-3664.71Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
G4T5A0_SERID2.900e-3664.71Polyadenylation factor subunit 2 n=1 Tax=Serendipi... [more]
A0A0P4VK08_9HEMI7.220e-3661.76Putative polyadenylation factor i complex subunit ... [more]
A0A023F3M6_TRIIF2.170e-3561.76Putative polyadenylation factor i complex subunit ... [more]
A0A0A9XQF1_LYGHE2.940e-3560.78Pre-mRNA 3' end processing protein WDR33 (Fragment... [more]
A0A0A9XKI4_LYGHE2.990e-3560.78Pre-mRNA 3' end processing protein WDR33 n=4 Tax=M... [more]
A0A8I6RUI8_CIMLE3.960e-3559.80Uncharacterized protein n=1 Tax=Cimex lectularius ... [more]
UPI0008F996B14.090e-3562.75pre-mRNA 3' end processing protein WDR33 n=1 Tax=B... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 43..82
e-value: 2.5E-6
score: 37.0
coord: 1..40
e-value: 1.1E-4
score: 31.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 2..40
e-value: 3.5E-8
score: 34.0
coord: 47..82
e-value: 2.9E-7
score: 31.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..91
score: 15.688
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 8..40
score: 11.21
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..100
e-value: 3.7E-28
score: 100.2
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 6..99
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 8..100
score: 24.653
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16913contigH-paniculata_contig16913:1143..2262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16913.3873.1mRNA_H-paniculata_contig16913.3873.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16913 1143..2271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16913.3873.1 ID=prot_H-paniculata_contig16913.3873.1|Name=mRNA_H-paniculata_contig16913.3873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
MTPIRHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERAL
TGHGWDVKTVEWHPFKSLIVSGSKDNLIKLWDPRTGNSLSTLYGHKNTVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf