mRNA_H-paniculata_contig1691.3872.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 3.170e-58 Identity = 95/222 (42.79%), Postives = 139/222 (62.61%), Query Frame = 1
Query: 46 RSLSAKLAEVGLVAGNSKLQRWLKEMGATRVKRRIAPSLSLTHRKNQVVFILDQAARNRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRPDPSRDFDGKIGIWRVCVIKQGQRKSAR-------------------RERG----QQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSHTGK 642
R +S +L ++GL G ++RW ++GA + RI PSLS +++++ FI D+ + +H+DE+WFYL R++++VR+F GE+ GP +V H++H+P +M I A +RPDP+ DFDGKIGIWR+CVI+ QR S + R R ++YEFD TIDA+WY++WY D L A+KEKMPWL + V+ QQDGA+ HTGK
Sbjct: 87 RQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGK 308
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.120e-19 Identity = 68/211 (32.23%), Postives = 99/211 (46.92%), Query Frame = 1
Query: 28 ESNPDPRSLSAKLAEVGLVAGNSKLQRWLKEMGATRVKRRIAPSLSLTHRKNQVVFILD--QAARNRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTK---VQHKTHIPNVMFICAVSRPD----PSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSH 633
E D RSLSA LA ++ LQR++K + P+LS +V FI TF + +H+DE WF++ + + RV + P E PT +HK+HIP +MF+CAV+RP FDG++G+W +R S RE G + + Y+ DS L A+K P G ++ Q+D ATSH
Sbjct: 138 EHRDDLRSLSAALA-----IPSTTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFISSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYLTPTE----PTPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLVLKSFPANKETYKRMLIDSVLPAIKLNWPSWSGRRIVLQRDNATSH 339
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 90.1 bits (222), Expect = 2.390e-17 Identity = 68/205 (33.17%), Postives = 98/205 (47.80%), Query Frame = 1
Query: 40 DPRSLSAKLAEVGLVAGNSKLQRWLKEMGATRVKRRIAPSLSLTHRKNQVVFILDQAARNRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRP----DPSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDV-TIDAKWYQEWYKDSFLSALKEKMP--WLEGEEVIAQQDGATSH 633
D R+LSA GN ++K+ R + P L+ ++K +V F L + F + TIHIDE WFYL + + GE T + K I VMF+CAV+RP D + FDGKIGIW V + QR S R RG ++ +++A YQ+ + L A++EK P W + + Q+D A H
Sbjct: 169 DLRTLSAASGIARTTLGN-----YVKKGQILRHSGAVKPFLTEKNKKARVEFALSLIKPDG-KFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPH 365
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.340e-16 Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 1
Query: 145 RIAPSLSLTHRKNQVVFI---LDQAARNRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRPD----PSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSH 633
R+ P L+ H+ +++ F+ L A + + T+HIDE WFY+T+ R ++ +E V K + K HI VMF+ AV+RP R +DG+IG+W + R S R+RG T+ Y+ + D + A++ K P + ++ QQD A H
Sbjct: 7 RLKPMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPH 175
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A6G0W8T3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8T3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.930e-16 Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 241 FQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRPDPSRD-FDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKM---PWLEGEEVIAQQDGATSH 633
F +H+DE WFY+TRD+ R ++ EE + P +Q KTHI VMF+ AV+RP RD +DGKIG W + QR S R G TI+ Y++ D SA+++K P + +I QQD A H
Sbjct: 2 FNRVHVDEKWFYITRDKLRFYVWHDEE-LPPRTLQSKTHIAKVMFLVAVARP---RDGWDGKIGCWPLVEHVVAQRSSKNRPSGTPILAPQTINRSLYRKILCDKVFSAIQDKWVPAPGFDDSTIIVQQDNARPH 132
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.320e-16 Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 217 NRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRP----DPSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPW-LEGEEVIAQQDGATSH 633
NR F S +QT+H+DE WF+LT + RV ++ EE V ++ K I VMF+ AV+RP + F GKIG+W QR S R +G + A+ Y+ D + A++ KMP ++G + QQD A+ H
Sbjct: 57 NRFIFDSMYQTVHVDEKWFFLTTAKKRVYVYADEE-VALRALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMPQRVQGSLIYLQQDNASPH 199
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A485L7X2_9STRA (Aste57867_17524 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7X2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.760e-16 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 148 IAPSLSLTHRKNQVVFILD--QAARNRITFRSSFQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRP--DPSRD--FDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSH 633
+ PSL+ +++ ++ + +D Q F + T+H+DE WF++TR + +V PGE ++ + K H+ VMF+ AV+RP D ++ FDGK+G W I QR+S RR+ G V + Y+ D+ + A++ K P E + V QQD A H
Sbjct: 134 VKPSLTDSNKVCRLKWAMDHVQDIDGAKFFDDMYDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARPRWDEAKQEWFDGKVGTWHFTEIVPAQRRSRRRDAGTLVMKTVPVTRDAYRAMLVDNVIPAIRSKWPADETKRVKIQQDNARPH 300
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A024U7I1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7I1_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.200e-15 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 241 FQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRPDPSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSHTGKD 645
++ +H+DE WF +D + + GEE V P + K IPNVMF+CAV+RP FDGKIG+W +R S R V +DA Y+++ + + +K P + V+ Q D AT H D
Sbjct: 2 WEVVHLDEKWFNADKDCHKEYLVEGEE-VQPRACKSKRFIPNVMFLCAVARPQKDVGFDGKIGLWPFVSQSPARRSSHNRPASSMVTTLVYVDATTYRDYALNKVVPEIKASFP-SASKRVVLQHDNATPHRSVD 134
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: A0A485LIJ5_9STRA (Aste57867_21562 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIJ5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.830e-15 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 241 FQTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKVQHKTHIPNVMFICAVSRP----DPSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSH 633
+ T+H+DE WF+++ + V PGE+ PT + K H+ +MF+ AV+RP + + FDGKIG W +R+S RR+ G V++D Y+ D + A+++K P + + + QQD A H
Sbjct: 2 YDTVHVDEKWFFMSWIKKTVYGAPGEKIKQPT-CKFKQHLLKIMFLSAVARPRLDNETNELFDGKIGTWHFTETVLAKRRSCRRDAGTPIMKSVSVDRTTYKAMLIDKVIPAIRDKWPRGDMKNIKIQQDNARPH 135
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Match: W4H1M3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1M3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.900e-15 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 244 QTIHIDEAWFYLTRDRDRVRMFPGEERVGPTKV-QHKTHIPNVMFICAVSRP----DPSRDFDGKIGIWRVCVIKQGQRKSARRERGQQYEFDVTIDAKWYQEWYKDSFLSALKEKMPWLEGEEVIAQQDGATSH 633
Q +H+DE WFY+T++R + + PGE+ P +V + K +I VMF+CAV+RP +DGKIGIW + Q QR S R G +T+ + Y+ + D L A+ K P + + Q D A +H
Sbjct: 167 QYVHLDEKWFYITKERRKFYLVPGEKE--PKRVCKSKRYITKVMFLCAVARPRYVHGAEMWWDGKIGIWPIVESVQAQRASVNRPAGTLETKSITVTKEVYRTFLLDKVLPAIVAKWPRGDDRAIKLQHDNARAH 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1691.3872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1691.3872.1 >prot_H-paniculata_contig1691.3872.1 ID=prot_H-paniculata_contig1691.3872.1|Name=mRNA_H-paniculata_contig1691.3872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp RYDSKGQRRESNPDPRSLSAKLAEVGLVAGNSKLQRWLKEMGATRVKRRIback to top mRNA from alignment at H-paniculata_contig1691:8395..9045- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1691.3872.1 ID=mRNA_H-paniculata_contig1691.3872.1|Name=mRNA_H-paniculata_contig1691.3872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=651bp|location=Sequence derived from alignment at H-paniculata_contig1691:8395..9045- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1691:8395..9045- >mRNA_H-paniculata_contig1691.3872.1 ID=mRNA_H-paniculata_contig1691.3872.1|Name=mRNA_H-paniculata_contig1691.3872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig1691:8395..9045- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |