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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 428 |
| Cds size | 423 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16901.3869.1 >prot_H-paniculata_contig16901.3869.1 ID=prot_H-paniculata_contig16901.3869.1|Name=mRNA_H-paniculata_contig16901.3869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MEAYVKSLIMENLVVPRKAAPQAGRTCLSRLECGPCESCDFPSEESVVKE
CMRFSESTEKLDLDGELYVDHFCSLYDTPDHSFDWEEAAILRNSALAVDP
GSLPAQGDVFVQKKKFGKWSKSFAQLEDGVLTISPYDSSGT back to topmRNA from alignment at H-paniculata_contig16901:3410..5435- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig16901.3869.1 ID=mRNA_H-paniculata_contig16901.3869.1|Name=mRNA_H-paniculata_contig16901.3869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2026bp|location=Sequence derived from alignment at H-paniculata_contig16901:3410..5435- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACGATGGAGGCGTACGTGAAGTCTCTTATTATGGAAAACCTCGTCGTG
CCCGTGAGTATAGCGACACTAGTGTTGGAGCACTCGTTGAAATGGAGATC
GTATGTTTGGAAACGGTGGTGATGATGTCGAGTGTTGAGATGTGGCATCT
TTCTGTGTGCTGTCGGCCTGCAACTGAAAAGGACGCATGTGTGTTTGTGT
CAGTGTCATATTGACTAAGAGCTACCGACTTTTTGTTTGCTGTCGCTGGG
ATATCTGGAGTTGCATGAATATCTCTCATGTTTTATCTTTGAGCTGAGAA
GGACGCAATAGGTGGGGAATATTGGAGTGAAAGTTGGGTTGTGTTCTCGT
GGCAGGACTTGTTTCTGCATTGTGTTCCGTCAATGAAGTCGGTTGATTCC
TTTCGTATTGCGTACCCAACCATGATGGTTATATTTCACTCCTTCCCTCC
CACAATAGTGGTAGCTCTAGAGCCAACTGGTTTGTCTCAGTATCGGCACA
CAACGATCGCATGTCATGTGGGTACATAGGTGCTCAACGCGTTTGACCAT
AGTCATAAGTAACCTACCACATTGCCTCATGCATACAGAGGAAGGCCGCC
CCGCAAGCTGGAAGGACCTGCCTCTCGCGTTTGGAATGCGGCCCATGCGA
GTCCTGGTATGTATTTAAATACCGTACCGTATGTGCACGATTAATATCTA
TATGCCGAGTGAATGGATGGTAGATGAGATAAGTGCAGTACAGTGGCCAC
CGATAAGTATACATGTCCGCGATATTAGTCAGGTGAGAAGCGTGGTCAGT
CAGTCACGCACGCGCCTACGCTTCTATAGCATGTACTGAACCCTCTACCT
CCCCTGTATGCCTGTGCTTTTCCATGTTTTGGCAGTGACTTTCCATCTGA
GGAGAGCGTGGTGAAGGAGTGTATGCGCTTCTCAGAGAGCACCGTGAGTA
ATGAGTAGTAGCACACCAGTAATGAGTAATGGGTAATGGTACAGATGTTC
AAATACACTACACCTCTATTAATAGTTGAATGTTTGCCTGGTCCAACTTG
TCGTACAGATAACTACTTGCTGAAGCAGCCCAGGCTATTGATGCGGCCGC
AGATCGGTGGATCGATCGCTCATGTTAATCGATTTTCGTGAGCGTTTGTG
AGTGATGATTCAATCGATACGTGTTCTACGGTGTTTGTTTGTGGTGTCCT
GAAATTGCCTTGCCCCTTGATCCTTGCTCCCCACGCAGGAGAAGCTAGAC
CTCGATGGCGAGCTGTACGTGGATCATTTTTGCAGTCTCTACGACACCCC
CGATCACTCGTTCGACTGGGAAGAAGCTGCAATCCTGCGGAACAGTGCTT
TGGCGGTCGACCCCGGAAGCCTTCCTGCCCAGGTACAAATGATATGATAG
CAAAAACACACAAACGAACAAAGAAACAAGCACATAGAACTGCCGGGTAG
TAGAGCTATGGAGACATCCGTCAGCAACAACTATAATACAGTATAGTACA
GCAACGTAGTGTGACCGTTGGGGCATGGATGCAACGCGTGGGGTGATACT
GCGCTGTGCTGATGATTGAGTGGCAATCTTTAGTATGCGGGCTAGTTACA
GTTAGGGTGGGATTCTTGTTGGTTATCGGTTCCATCATTTTGCTGTGCGG
GGCCAGTGACGGGCTCCAATTGTGTCTAAACGATGGAATTTTTTTTCACA
AAAACGGAAGGAAGGTCATAGGCGAAAATCGAGAATGCAGCTTTCGCATT
TCCGAATGAATTCAACCAATAGAAAAATATACGGGAAAGTGTGGACGTTG
TGGACAGACACGATGGACAAGGCATGCTTATGACTGCCGATCCTTGATCT
CGGTGAGAAAAAAATGTCATCCTTCGCCATCTCGTTCCCCTGCGTTTGCA
TTGATGCATGATGTCGTGCAGGGCGATGTCTTTGTGCAAAAGAAGAAATT
TGGCAAGTGGAGCAAAAGCTTCGCTCAGCTAGAAGACGGCGTCCTTACTA
TCAGCCCATACGACAGCAGCGGGACC back to topCoding sequence (CDS) from alignment at H-paniculata_contig16901:3410..5435- >mRNA_H-paniculata_contig16901.3869.1 ID=mRNA_H-paniculata_contig16901.3869.1|Name=mRNA_H-paniculata_contig16901.3869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at H-paniculata_contig16901:3410..5435- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCGTACGTGAAGTCTCTTATTATGGAAAACCTCGTCGTGCCCAT
GGAGGCGTACGTGAAGTCTCTTATTATGGAAAACCTCGTCGTGCCCAGGA
AGGCCGCCCCGCAAGCTGGAAGGACCTGCCTCTCGCGTTTGGAATGCGGC
CCATGCGAGTCCTGAGGAAGGCCGCCCCGCAAGCTGGAAGGACCTGCCTC
TCGCGTTTGGAATGCGGCCCATGCGAGTCCTGTGACTTTCCATCTGAGGA
GAGCGTGGTGAAGGAGTGTATGCGCTTCTCAGAGAGCACCTGACTTTCCA
TCTGAGGAGAGCGTGGTGAAGGAGTGTATGCGCTTCTCAGAGAGCACCGA
GAAGCTAGACCTCGATGGCGAGCTGTACGTGGATCATTTTTGCAGTCTCT
ACGACACCCCCGATCACTCGTTCGACTGGGAAGAAGCTGCAATCCTGCGG
AACAGTGCTTTGGCGGTCGACCCCGGAAGCCTTCCTGCCCAGGAGAAGCT
AGACCTCGATGGCGAGCTGTACGTGGATCATTTTTGCAGTCTCTACGACA
CCCCCGATCACTCGTTCGACTGGGAAGAAGCTGCAATCCTGCGGAACAGT
GCTTTGGCGGTCGACCCCGGAAGCCTTCCTGCCCAGGGCGATGTCTTTGT
GCAAAAGAAGAAATTTGGCAAGTGGAGCAAAAGCTTCGCTCAGCTAGAAG
ACGGCGTCCTTACTATCAGCCCATACGACAGCAGCGGGACCGGCGATGTC
TTTGTGCAAAAGAAGAAATTTGGCAAGTGGAGCAAAAGCTTCGCTCAGCT
AGAAGACGGCGTCCTTACTATCAGCCCATACGACAGCAGCGGGACC back to top
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