mRNA_H-paniculata_contig169.3866.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: A0A836CD75_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD75_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.400e-29 Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPA--GIKFSSQIAVVKTPQRG----------VESVFTLSVSELLDPGFRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQQAILP 351
+FPGGHI+ GEGP++AALRET EEVG +G V ++G CQ VPA G + + + V+ G V FT+ ++ LLDP R ++ LG RG P F A P R+WGLTA I DGVL+ A++P
Sbjct: 69 AFPGGHIKAGEGPVDAALRETVEEVGEGIGAVHIVGHCQTVPAVTGTRVTPVVGWVERDVDGCRRLELCPDEVAHAFTVPLAHLLDPANRGMERLGARGDMPVFMADPHRIWGLTAFITDGVLRNAVVP 197
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: A0A482SM29_9ARCH (CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SM29_9ARCH) HSP 1 Score: 95.5 bits (236), Expect = 4.430e-22 Identity = 55/134 (41.04%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPA--GIKFSSQIAVVKTPQRG----------VESVFTLSVSELLDPGFRVVDDL---GLRGKHPAFTAGPS--RVWGLTAIIADGVLQQAILP 351
SFPGGHI+P E IEAA+RETREE+G +G ++VLG Q VPA G + +A V+T + V+ +FT +++EL +P +R + +L G++ K P + G S R+WGLTA+I D +L ++P
Sbjct: 74 SFPGGHIDPNETAIEAAIRETREELGDGIGIIQVLGVAQTVPAITGTLVTPVLAYVETDVQDLQHLTPSPSEVDVIFTRTLAELTNPSYRTIQELERQGVKYKMPVY-GGQSEHRIWGLTAMILDPILHNVVMP 206
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: A0A0G4EFA4_VITBC (Nudix hydrolase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFA4_VITBC) HSP 1 Score: 97.8 bits (242), Expect = 2.290e-21 Identity = 53/132 (40.15%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPA----------GI--KFSSQIAVVKTPQRGVESVFTLSVSELLDPGFRVVDDLGLRGKH---PAFTAGPSRVWGLTAIIADGVLQQAILP 351
SFPGGHIE GE PI+AALRET EE+G +G + ++GTC+ V A G+ + ++ ++ V VFTLS+ +L DP + ++ L G PA+ G +VWGLTA I +GVL++ ++P
Sbjct: 332 SFPGGHIERGETPIDAALRETHEELGSRIGDITIIGTCEQVVAVTGTIVHPVIGLLRRDVGELLWIEKSDDEVADVFTLSIEQLTDPSLQTLEQLPRGGSTYTVPAYLGGVHKVWGLTAFILEGVLRRVVVP 463
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: A0A7S3NPN8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPN8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.140e-15 Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGH-VEVLGTCQAV--PAGIKFSSQIAV---------VKTPQRGVESVFTLSVSELLDPGFRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQQAILP 351
SFPGGH+E E P++AA RE EE+G +++ C + P+G+ + +A+ +K + V SVF L ++ LLD R RG+ P F GP VWGLTA I DGVL + P
Sbjct: 103 SFPGGHLEAEENPVQAAFREAEEELGYEFRRDFQLVDECSDIMAPSGVVVTPVVAIRSRELNLENLKLSEE-VASVFALPITHLLDDNHREWRTYEGRGRMPVFFGGPEEVWGLTAYILDGVLDAVVAP 230
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: L8TL87_9MICC (NUDIX hydrolase n=3 Tax=Micrococcaceae TaxID=1268 RepID=L8TL87_9MICC) HSP 1 Score: 77.4 bits (189), Expect = 5.430e-15 Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPAGIKFSSQIAVV-------KTPQRGVE-----SVFTLSVSELLDPGFRVVDDLGLRGK---HPAFTAGPSRVWGLTAIIADGVLQQA--ILPW 354
+FPGG I+ GE P+EAALRE EE G G VEVLGT Q + G+ S+ + +P R V+ VF + V +LLDP RV+ + G+ P FT VWG T I+ G+ Q +PW
Sbjct: 83 AFPGGSIDAGESPVEAALREAEEETGLDAGGVEVLGTLQQL--GLAHSNFLVTPVLGWWHSPSPVRVVDYAESAQVFRVPVRDLLDPDHRVMATVHRAGRTFDSPGFTVNGVLVWGFTGIVLSGLFDQLGWSVPW 215
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: UPI00185271E1 (CoA pyrophosphatase n=1 Tax=Catenulispora sp. TaxID=1962977 RepID=UPI00185271E1) HSP 1 Score: 77.4 bits (189), Expect = 6.490e-15 Identity = 51/124 (41.13%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTC--QAV-PAGIKFSSQIAVVKTPQ-------RGVESVFTLSVSELLDPG--FRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQ 336
+FPGG ++PGEGP+ ALRE EE V+V G Q V P+ + + +TP R V SV ++VS+L+DP R+V GL G PAF AGP +WG TA + DGVL+
Sbjct: 79 AFPGGKVDPGEGPVTTALREANEETDVDPAGVQVFGILPDQYVGPSDFLVTPVLGWWRTPSPVRVRDTREVASVARIAVSDLVDPANRMRLVHPSGLSG--PAFEAGPLLIWGFTAALLDGVLK 200
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: UPI001D0F0F76 (CoA pyrophosphatase n=1 Tax=unclassified Cellulomonas TaxID=2620175 RepID=UPI001D0F0F76) HSP 1 Score: 76.3 bits (186), Expect = 1.810e-14 Identity = 50/134 (37.31%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 1 SFPGGHIEPGE-GPIEAALRETREEVGPSLGHVEVLGTCQAVPAGIK----------FSSQIAVVKTPQRGVESVFTLSVSELLDPGFR---VVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQQA--ILPW 354
SFPGG ++P + GPIEAALRE REE G V+VLG +P + +S AV VF + V++LL PG R V G+ + PAF AG VWG TA++ D + +PW
Sbjct: 94 SFPGGRLDPADRGPIEAALREAREETGLDPEGVDVLGVLPPLPVAVSNHLVTPVVGWWSHPSAVAAVDHAETADVFRVPVADLLSPGNRRTATVTRGGVTYRSPAFLAGDHLVWGFTALVLDAMFDTLGWDVPW 227
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: C7Q3R6_CATAD (NUDIX hydrolase n=2 Tax=Catenulispora TaxID=414878 RepID=C7Q3R6_CATAD) HSP 1 Score: 76.3 bits (186), Expect = 1.860e-14 Identity = 51/133 (38.35%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPAGIKFSSQIAVV------KTPQ-------RGVESVFTLSVSELLDPGFRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQQA--ILPW 354
+FPGG ++PGEGP+ ALRE EE V+V G +P F S V ++P R V SV ++VSEL+DP R+ PAF AGP +WG TA + DGVL+ LPW
Sbjct: 82 AFPGGAVDPGEGPVATALREANEETDLDPAGVQVFGI---LPDQYVFPSDFLVTPVLGWWRSPSPVRVRDVREVASVHRIAVSELVDPANRLRVGSPSGTSSPAFEAGPLLIWGFTAALLDGVLKAGGWELPW 211
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: UPI0018917475 (CoA pyrophosphatase n=2 Tax=Catenulispora TaxID=414878 RepID=UPI0018917475) HSP 1 Score: 74.7 bits (182), Expect = 6.510e-14 Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPAGIKFSSQIAVV------KTPQ-------RGVESVFTLSVSELLDPGFRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQ 336
+FPGG ++PGEGP+ ALRE EE V+V G +P F S V +TP R V SV ++V +L+DP R++ PAF AGP +WG TA + DGVL+
Sbjct: 76 AFPGGAVDPGEGPVATALREANEETDLDPAGVQVFGI---LPDQYVFPSDFLVTPVLGWWRTPSPVRVRDAREVASVCRIAVRDLVDPANRMLVGSPSGNSSPAFDAGPLLIWGFTAALLDGVLR 197
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Match: A0A7R9U5Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y6_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 7.230e-14 Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 1 SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPA--GIKFSSQIAVVKTP---------QRGVESVFTLSVSELLDPGFRVVDDLGLRGKHPAFTAGPSRVWGLTAIIADGVLQQAI 345
SFPGGH+E E ALRET EE+G S H+ LG C+ +PA G + I ++K + VE+VFTL + LL + RG P F VWGLTA+I G ++ +
Sbjct: 88 SFPGGHVEADESYERCALRETYEELGISPEHITTLGFCETIPAVTGTMVTPVIGLLKPDLTDVPLTLSEDEVETVFTLPIRALLSDALLEMRKYENRGTLPVFHGADHEVWGLTAMILHGFVENCL 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig169.3866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig169.3866.1 >prot_H-paniculata_contig169.3866.1 ID=prot_H-paniculata_contig169.3866.1|Name=mRNA_H-paniculata_contig169.3866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp SFPGGHIEPGEGPIEAALRETREEVGPSLGHVEVLGTCQAVPAGIKFSSQback to top mRNA from alignment at H-paniculata_contig169:44583..45452- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig169.3866.1 ID=mRNA_H-paniculata_contig169.3866.1|Name=mRNA_H-paniculata_contig169.3866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=870bp|location=Sequence derived from alignment at H-paniculata_contig169:44583..45452- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig169:44583..45452- >mRNA_H-paniculata_contig169.3866.1 ID=mRNA_H-paniculata_contig169.3866.1|Name=mRNA_H-paniculata_contig169.3866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig169:44583..45452- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |