|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 706 |
| Cds size | 582 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig169.3863.1 >prot_H-paniculata_contig169.3863.1 ID=prot_H-paniculata_contig169.3863.1|Name=mRNA_H-paniculata_contig169.3863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MSEVSQLNEMNTVLIASKEDNDKKRHEAHQMAAKIAELEKQLEDGVAFTN
RYRATKTAATGGLRRRLQALDDLFLKLDHVAKQTSDMYISRIAAMAEGVQ
EQERAAAQGTRDVTAAFERLNVMISRHRECSEQEANIKTLSAAKTSTENE
IEELAARIKELDTLSKIEDEETAIADAARRATLAATQSRQAEKE back to topmRNA from alignment at H-paniculata_contig169:20481..22948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig169.3863.1 ID=mRNA_H-paniculata_contig169.3863.1|Name=mRNA_H-paniculata_contig169.3863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2468bp|location=Sequence derived from alignment at H-paniculata_contig169:20481..22948- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGTTGGCTTCCTCTTCTTGCTGTCCTCACTCACTCAGCCGAAATTGAGT
GTACACGACGGCTTTGGTGGAAGCGAGATTTCACTGTTGTTCTGGCGATA
GCTTTTCTGCTGACAAAGGTGAGTACTGATTGGCGTGTCAACTACCTTTT
TTGAAAATTTAAATTCAAACGCAGGTTCTGACTGCAGGGTGTGGAGTGTG
GAGCAAAGCAAAAGAGAGGCACCGGAGGATGGATGGACATGAAAGATCGT
CACGAAACAAAACCAAATATGCTTGCTGTGTAGCGATGGGCCTACGTGTG
TCGTCCGTCGCTCTTCTTGATCGAATCTTGCAAAACAGAACCATGTCAGA
GGTGTCGCAGCTGAACGAGATGAATACCGTGCTAATAGCCTCGAAAGAAG
ACAACGACAAGAAGAGACACGAGGCTCACCAAATGGCAGCCAAGATAGCG
GAGCTCGAGGTCAGTCATGTCTGTACAGGGCATACGAATGAGCTGCTACC
CTCTTATACCATCGTACACCATACATCATATCAAGGAGTATTGCTGCGGC
GCTCAACAATAACTTTGACCTTATTGTCCTATCGCCATACCACACACAGC
TTGCACAAACATAGAATGCATCAATTGAAGCTCTAGTGTACACAACTGTG
CATGATGTAAGGGCGATTGACTTGTGGGCTTCGGTGCGATGAGTTAGCTG
TCGCTGTCTTTCGGAGTAATTCACATCATGATCTCAGCGATGCATAGACA
GTACAAATGACATACTGACTTGATTCTACATGGACGATAGCAGTCAAGTC
CCCACCCCTATCTCGAAACGCAGAAACAACTTGAAGACGGTGTGGCTTTC
ACCAACCGCTACCGCGCTACGAAAACAGCTGCAACAGGAGGATTGAGGAG
AAGATTACAAGCTGTGAGTTAATGTGTATCCCCCAACTTTGTGGCTTCGA
CCGAGGCTCTCCACGCTTGTTTGACCAACAGAAAGACTTCTGATCAACCT
TCTACTTATGGTGCTCCGCGCTGTGAGCTACCGTCTACATTGCACTCCTA
CAACCTGGTACACACAGTAGAGATTACATTTTTTCATTATCTGTGCGCTG
CCCAGGGGGGCATGCTGAACAACGAAAACCGGATTTCGTTCGTAATTAGG
GTACTCATGCGCCTACTTTACAATTGAAGTCGAAAAGTAATATGTTGTTC
TGTGGATTATGACGTACAGTCAATAATTCTACCTTGTGTCCCCTCTGTTT
GACTATCCATCCGTCAACGTTCCGTGTAAGTTGGACGACCTGTTTCTGAA
GCTGGATCATGTGGCGAAGCAGACATCAGATATGTACATTTCTCGCATCG
CCGCTATGGCTGAAGGTACGCAATTTCCAACGTTCTGATTGTGGTGCCAT
CGCCAACACGCCACCTTCACCGTGGATCGAAGATTTTCTAAACTCTATTC
CTTGACCAGCATAGATTACGCTGCACTCCTGGATTCGTAATGATTGATGA
CAACAATTTCGCAGCTGATTCTACGATTGTTGACTTTGTGCTCGTAGATG
GTGATGACACCAGTCGTCCCAATGTATAATGAATGTACCTGTAAAGGTTG
GTGCTGTAGGTGGCACGTGCAGGACTTACTGGGGCTATATTCATTTCAAC
TCAAGCGTTATTTGCAGGGAAGTGTTGGGTGCCTGTCGTGCCCTTCCTCA
AGTGCTAGAGTGGGGCACTCAGCATTCTGTTCGGATTTGCCTACAACTGG
AGAGCTACCTAGCGAATCGATCAACTTGCCTTTTCGTTGGTCATGTTTAC
AGGCGTGCAAGAACAGGAGCGTGCTGCTGCCCAAGGGACCCGAGATGTGA
CCGCGGCTTTCGAGCGCTTGAACGTGATGATAAGTAGACACCGCGAGTGT
AGCGAGGTAGGGAACTTGTGTTGAGTACTATCTATCTCAAGCAAGTTCAC
ACCAAAGTTGCAGTAGCATTTGGTTCGTTGGCATTCGTGCTGGCAGATAA
TTCGACCGACACATGCTCTTTGTTTCCTGCGTTGTTATGAGCCATTCCGA
GACGCCGCTGCGGGCATGGAATTTGCACGTGTTGACCACTTATGTTGAGA
ACAATAATGCAGTTAACACACCGTGGATCCATATCGTGACTCGTTTCCAA
CGACAGCAAGAGGCCAATATCAAGACCTTGTCAGCGGCCAAGACCTCAAC
GGAGAATGAAATCGAAGAGCTTGCTGCCAGGATCAAGGAGCTTGACACGC
TAAGCAAGATCGAAGACGAGGAGACCGCCATCGCCGATGCTGCACGCAGG
GCAACACTAGCGGTATGTGTATGACAATTGAGGTACACGCTTTGGGCTTG
AGCATCCAATTCCGTGATTTGGCTCCTAATTTGTGGTGCGATGCATGACC
TCGATAGCCATTGTCGCCATTGTCCCCATGGCACCCAGGCGACGCAGTCG
CGACAGGCTGAGAAAGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig169:20481..22948- >mRNA_H-paniculata_contig169.3863.1 ID=mRNA_H-paniculata_contig169.3863.1|Name=mRNA_H-paniculata_contig169.3863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig169:20481..22948- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGAGGTGTCGCAGCTGAACGAGATGAATACCGTGCTAATAGCCTC
GAAAGAAGACAACGACAAGAAGAGACACGAGGCTCACCAAATGGCAGCCA
AGATAGCGGAGCTCGAGATGTCAGAGGTGTCGCAGCTGAACGAGATGAAT
ACCGTGCTAATAGCCTCGAAAGAAGACAACGACAAGAAGAGACACGAGGC
TCACCAAATGGCAGCCAAGATAGCGGAGCTCGAGAAACAACTTGAAGACG
GTGTGGCTTTCACCAACCGCTACCGCGCTACGAAAACAGCTGCAACAGGA
GGATTGAGGAGAAGATTACAAGCTAAACAACTTGAAGACGGTGTGGCTTT
CACCAACCGCTACCGCGCTACGAAAACAGCTGCAACAGGAGGATTGAGGA
GAAGATTACAAGCTTTGGACGACCTGTTTCTGAAGCTGGATCATGTGGCG
AAGCAGACATCAGATATGTACATTTCTCGCATCGCCGCTATGGCTGAAGT
TGGACGACCTGTTTCTGAAGCTGGATCATGTGGCGAAGCAGACATCAGAT
ATGTACATTTCTCGCATCGCCGCTATGGCTGAAGGCGTGCAAGAACAGGA
GCGTGCTGCTGCCCAAGGGACCCGAGATGTGACCGCGGCTTTCGAGCGCT
TGAACGTGATGATAAGTAGACACCGCGAGTGTAGCGAGGCGTGCAAGAAC
AGGAGCGTGCTGCTGCCCAAGGGACCCGAGATGTGACCGCGGCTTTCGAG
CGCTTGAACGTGATGATAAGTAGACACCGCGAGTGTAGCGAGCAAGAGGC
CAATATCAAGACCTTGTCAGCGGCCAAGACCTCAACGGAGAATGAAATCG
AAGAGCTTGCTGCCAGGATCAAGGAGCTTGACACGCTAAGCAAGATCGAA
GACGAGGAGACCGCCATCGCCGATGCTGCACGCAGGGCAACACTAGCGCA
AGAGGCCAATATCAAGACCTTGTCAGCGGCCAAGACCTCAACGGAGAATG
AAATCGAAGAGCTTGCTGCCAGGATCAAGGAGCTTGACACGCTAAGCAAG
ATCGAAGACGAGGAGACCGCCATCGCCGATGCTGCACGCAGGGCAACACT
AGCGGCGACGCAGTCGCGACAGGCTGAGAAAGAGGCGACGCAGTCGCGAC
AGGCTGAGAAAGAG back to top
|