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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Model size | 1155 |
| Cds size | 414 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig169.3862.1 >prot_H-paniculata_contig169.3862.1 ID=prot_H-paniculata_contig169.3862.1|Name=mRNA_H-paniculata_contig169.3862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MEAGSISQRVENLTKEFEAAKARAAEECQRRAEAAKEALLTEVMAHKVGA
MTAEIEVTYAEELKRMQDEIVCEDTRLRAAWTDTSNSTSCGGAEERLQMD
LSDLSAEEAVIRSEVEAAELRVQRLKDTTSGERALSS* back to topmRNA from alignment at H-paniculata_contig169:14138..19173- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig169.3862.1 ID=mRNA_H-paniculata_contig169.3862.1|Name=mRNA_H-paniculata_contig169.3862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5036bp|location=Sequence derived from alignment at H-paniculata_contig169:14138..19173- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGAAAGACGGAGCACAAGGAGCTGTCTTCGTCCATTGCAGGTCTCAGGC
AAGTGTATTCTCGCGATGGAATGACCTCCGTGATTTCGATTCGATCCGAT
TCCATTGGGCGGGTGATTGCTTTTTTGTATCGGAACAGCTCTCCAGTTGA
ACAGCACGCCCAATGTCCGCCACTCGCATTGTTATTTTGGCTTCCTAATG
ACTCTATTTCTTTCTATATATCTGGGAGGTATTATAGGTCTTACATCTCG
TTCTTCTCTAGTAGAAGAGGAGCCATCTGTTTGACTGTTTTTTTGGCTCA
ATCGGGTTACACTCTGGTTTACTTTACTCCGACCTAGTTTAATGACTCTT
GATGGCCAGATCTGCCGGGACAGACGCCGCTGCTCGCAAGTCTTCTTTGG
ACGGTGATACAAAGTCCGCAAGACTGGAAGCGGAGGCGGCTATCACCGAG
ATCAAGGGCAAGATTGCCACCTTCAAGAAGGTGCAAGCGACCATTTATTC
CGCAGTACAGGTAGCATCCTTACCCAGAAGCAAAAACAAACGTATGAAAG
CAGCATTGATTTTGGAGGATGGTGGGATTTGTGGATATTTACTGGCAGGT
AAAGCGCAGGAGCTGAAGACGGTATGAAACAACTTAAAAAGTATATACAT
TGGGCGCGTTATAGGTCCCCGCGTATTTTAATTGAAGATACGCGTACTGT
AGAGCGAGACACAATGCAGATAGGAAATAAAACGCCGGAGAAGCCGCGGC
TAGCTAGCAACTCATACCAATCGGTGAGATTGGTCAACCTATCATTAAAC
ACGGTACACACTTCACGTCGAATGTCCGACTAGGCACGTTTTTTGGCAAG
TGTAACAGTTCTCCAGAAGAGGATATTTGAGGGCATAACATCGCTGTCGC
ATCGTTTTCTCTCTACAATACATGACTCCTTCTCGCGTCTACGACGGCGT
TTTGCAAACAGGCGCGTGCGTGTCAGTAACCTGCAATCATTCGAACGCGA
ATCACGAAGCACACATCATGTTGCGATGTTGTGACGTGACAAATGATGGC
ATTCGATGGGGTATATTTCACGTCACACATTCGATCAGACAGAGCGCGTT
ATCCCCGGCCCCTTACCTCTTTTGTTGGTTTATTGCAATACTGGATTACT
CAATACTAGTCTACGAAGGACGGTGAGAGCATCGTCGCTGCGAGGAACGA
GGCCGCCGCATGTGTGCTTGCCGCACAAACTGCGCTTACAAATGCGAAAA
AGGAGCTGGCATCTGTGCAAGGTACTTTGTTGAGCTGTTGCCTCGTTGTG
CTGCACGCACTCTCCCTGTATAGCGGCAATGCCCTGCAAACGGTCAGCCA
TGGTCGCTGGTGCAGAACACACCGCGAGCGCTCTCAACTACGTAATCACA
TATCGATATGTTGTGAATACATTCACACACTTGAAATGTTTTTGTGTTCG
TCAGTCATCAACCAGGAATTTTCGGCCACTCAGATTTCTACTTTGAAAAG
ATTGACTAATAGGAAAACTGCGGGCACGAAATCCTTTTCTCTCTTACCTT
TGTTTTCCCTTTCAATAACCAGAGTTGTTGCAGGCGACATTGGTTGCCCT
CGACAAGCAACATCTGGTGGAACAAGAGCTTCGGAACACGGCTGGCGAAC
GAGACTCAGCGCATGCGGAACAAATTACTCGGTGTGAGAATGCGATAGTA
GAGCAACGCATGGAGGCGGGAAGCATTTCTCAAAGGGTGGAGGCGAGTCA
GTGTGGACTCGCCCAATTTTCGATAAGTAGTATTGACACTACATATGACC
TTCAACGTTCACTCCTCGCCCTGGCGGTGGCAATTTACTCTCGACCTGGA
CTCCACGTCTCAAGGAAGAAGCATAAGGCATGGGGCACGAGAATGACATG
AGAAGGGTCCAACCGTAGAGGAGCGCCATTAGCATCGAGATACCGTGCTT
GCCTTCTTGCCACTAGGAGAACAATCAATCATTCTCAGGATTGATAGTGA
AGTTGATGATGATTCCTCACCGGGAGAAAGCCCACTTTTCAACATTTGCC
CTTGCCTGTAACTTGGTGACTGACTACACTGTAGAATCTGACGAAAGAGT
TCGAGGCGGCCAAGGCGAGAGCAGCGGAAGAGTGTCAGAGGCGTGCTGAG
GCAGCAAAGGAGGCGCTCTTGACTGAGGTCATGGCACACAAGTAAGGTCG
ACACTGCTATAGTTTTAGCAGTATACACGTTTCGATACTGCAACCTGCTA
GACACTGCCGTGCCTAAGAGGGCCGACCGGATGCTGTAGATACATGCGAG
CCTCCAATTCTGCAGGACAGGCATTGATCGATCGGGAAGTGATATCCTCT
TGCAATTTTTCGCGCAGACGATACAGCACCCGGCTTATTGCTGCATGAAA
AAAAAAAGCGTTTGTCCCAACTTACGGTATGATATGTCCCAAGGTTAGCG
ATTCAATATTTTTATGGAGAACCAGGCCGTAGCTTGGGACATGCTAACAA
TCGTTTCGAAGTACTTTGTCTTGTGGCTCTGCAGTTGCCGGCAATGTAAC
ATTGTTTTCGTTCATCCTCATGCTCTAGGGTTGGAGCAATGACGGCGGAG
ATCGAAGTAACATACGCTGAAGAGCTCAAGCGTATGCAAGACGAGGTATG
AAATGAGATGGCAAGTGTAGGATTGTAAATGCACTTCTAATAGGCCCATA
TACTAATCTCAATGTAAAGAGCGTAATCGGCCGCGCAGCATTAGTTATAC
GAGTAACTGTGAGTCATTTGTTTGCCGTGGCTGGATCCTCACCACCTGGC
GTGCGCTTGGTATTGCAAGCAGATTGTGTGCGAGGACACTCGACTTCGCG
CCGCTTGGACAGACACGAGCAACAGCACATCGTGCGGTGGGGCAGAAGAA
CGCCTACAGATGGACCTCAGCGACCTAAGTGCCGAGGAGGCCGTGATTCG
ATCTGAGGTCGAGGCTGCGGAGTTGAGAGTTCAAAGGTACGCTTGCGCTT
GTTGCACAAGAAGTATGCTGTATATATCAACCAGAAATCCGTCAAATTAA
TTCCTTCACTGCTGGATAGCCCCGTAAAAGCATCGTCGTGGTGTTGGATG
GCCGACTACTGCGTCGATTGTCCAATTTGAAAAGTGATGCAATGTTGAAA
GAAGATACGGCGGGCCTATCGTGTAGGGGAACTTACCAACAAGTTGTACA
CCTGGAAATGATAGAAATTAGTGCACTACCCCCCGAATTCGTGGGTCAAA
GAGGAGATGAATCGCATTTGCAGTGGCAGGTACCCAGACCTTCTGTTCAA
AGGGAACAACCTGCTTAGAGAAATCGACGGCACGGTTTCAACTAATAATT
GAAGTACCGACCAGCCTCGATACATGAAGCTACAATGCCGAAATTATCGC
GCACCCTTTCTTCCATTCGCCCCCCCGATGATCGCATATCACATGACAAA
GGTCATTATTAACGAGCACATTTTGGGCGGACATGATGAAATCTGGAATA
CTTAGAATTAGTGGTGAAACGTGGAAAGATCTGAAGTTCTCCGACTTTAA
AATTCCCAAGGGGTCGATTTTGTCGATATTGCCCAAAATTTCCGTTCAAC
CCCATTTTCACTTTTGAGTTATGAGGTTTTTGGCTCCTCTCACGTCCCAC
CCCAAATTCCGAGATTCCCGGGTTTCGTATTTTCCGCCCAAAATGTGCTC
GCTAGTGATGACCCTAAGACGCGAATGAATTGTGCTTGCTTCACCTTGAC
ACGTCCGAAGTACATATGGTTGATTACCTCCTTTTCTTGTGCCCTCTCTT
GGAAACAAGCCCCGGAGTTGATTTAGCGATTTCTCGATGTACAATGCGGG
AAAACGGAGGTCGTTATCTCTGCCAAAGTACCCAATATATTCAAGGATAT
GCTCGGAGTATAATGTATGTAATCATGTATATGTGAGTACTTGTCCTGAT
TGATCTCCAGCCTCAGACGATAAGATTCGGCTCGTTTACACATGCAAGGA
ACTTTTAACTGTTATTTCGTACGTGCGAACATCTGCTCAACAGGCTGAAA
GACACAACATCTGGTGAGCGTGCACTCTCCAGTTGATCGTTATCGAGCAT
AGGCCACGCAGTTCATCAAGATGTGGTGAGCCGCTGTGTGGGTCTATATT
AGAACATGGCCCATTTGCCCTTATGTACAGTATAGGTCTCACTGAAAAGA
TTTTCACCGGAGCACAATTCACCTTCGTGTCAGATGACGTGTTCACCAGC
TCACATAGGAATGGCCCGCGACGTCGCTTATGTTTGTCTTTGCTGGCCGG
TGTTACGCCTTTGCTCTATAGGCCACATTTGGCAACGTAGAGAGTGCGAT
TGGCCATCGGAAATCGCTCTGATAGGACGGATACTCCGGCCTCCCGAGGA
TGCCCGGTCGAAGGTCCAACAACTATGGCATGCAATACATGGGTACCCCC
CCCCCCCCCCTTCCCCTATAGTCCGCCATATACATGAGGGGTAAGCGCCT
CCTTACGACTCAACCGAATGCAGGCAGCGAGAAATGTGCCTTGAAAACAG
AAACATGGGTCTGGCAATTATGGAGCATTCGACCTTTGCACCTCCGCCTT
GCCTAGAATTTTTGGGTGATGTAGGTATGTCCTGTGCAAAATATTGTCGA
ATGAAATACGATCACGTGGCCGTGAAAAAGAGACAGACTATAATGTGTTG
CTGTGTGTCACTCAATCCATGTGTCTTCGTCTCCTCTTTGAAAATGTGCC
AGAATGGGTCCATCCACTTCAGCGAAAGCATCTTATTATTCATGAAAAGG
ACAGAGAAGAGGCTCGACACCATCTCAACGAGGGGTTGAATCCGCAGCCT
ATTTCTCTCAGGGGGGTAGCTCAAGATGTGAACGAACTGCTGAATGTCAA
ATGGAGAACATGTCCAATGCCATGCGACAGCAACACAAGGAATAGCATTG
GAGTCGACAGGAGAAGCAGTTGAATAAGTGATTCGGAATCTTTATTCAGT
TTGTCGCATAACTTGTTCGAAAAATTTACTCATGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig169:14138..19173- >mRNA_H-paniculata_contig169.3862.1 ID=mRNA_H-paniculata_contig169.3862.1|Name=mRNA_H-paniculata_contig169.3862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig169:14138..19173- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCGGGAAGCATTTCTCAAAGGGTGGAGATGGAGGCGGGAAGCAT
TTCTCAAAGGGTGGAGAATCTGACGAAAGAGTTCGAGGCGGCCAAGGCGA
GAGCAGCGGAAGAGTGTCAGAGGCGTGCTGAGGCAGCAAAGGAGGCGCTC
TTGACTGAGGTCATGGCACACAAAATCTGACGAAAGAGTTCGAGGCGGCC
AAGGCGAGAGCAGCGGAAGAGTGTCAGAGGCGTGCTGAGGCAGCAAAGGA
GGCGCTCTTGACTGAGGTCATGGCACACAAGGTTGGAGCAATGACGGCGG
AGATCGAAGTAACATACGCTGAAGAGCTCAAGCGTATGCAAGACGAGGGT
TGGAGCAATGACGGCGGAGATCGAAGTAACATACGCTGAAGAGCTCAAGC
GTATGCAAGACGAGATTGTGTGCGAGGACACTCGACTTCGCGCCGCTTGG
ACAGACACGAGCAACAGCACATCGTGCGGTGGGGCAGAAGAACGCCTACA
GATGGACCTCAGCGACCTAAGTGCCGAGGAGGCCGTGATTCGATCTGAGG
TCGAGGCTGCGGAGTTGAGAGTTCAAAGATTGTGTGCGAGGACACTCGAC
TTCGCGCCGCTTGGACAGACACGAGCAACAGCACATCGTGCGGTGGGGCA
GAAGAACGCCTACAGATGGACCTCAGCGACCTAAGTGCCGAGGAGGCCGT
GATTCGATCTGAGGTCGAGGCTGCGGAGTTGAGAGTTCAAAGGCTGAAAG
ACACAACATCTGGTGAGCGTGCACTCTCCAGTTGAGCTGAAAGACACAAC
ATCTGGTGAGCGTGCACTCTCCAGTTGA back to top
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