mRNA_H-paniculata_contig16898.3860.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16898.3860.1
Unique NamemRNA_H-paniculata_contig16898.3860.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A6H5KXU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXU2_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 3.640e-126
Identity = 192/240 (80.00%), Postives = 217/240 (90.42%), Query Frame = 1
Query:  259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDDF 978
            ++EFVVSE+L ++RLCEI DGGHFF+HDAEG DL  IE KLKELK+KVG SGA ME RR TLCAALFDDG GPAWYRAKV+G+TP+G RV YVDHGN ATV +S LRPLD SYFAF+PQARECVMA MRVPSLEEEFGRDAA+ LN + WGKELLGRA+GRD++GR+MMALYESED+ES+NE+LVAQGVARVASNADK+A SQPAK++VARLRE+QE AHKSRANMWRYGDCQSDDEDDF
Sbjct:  702 DKEFVVSEELNKYRLCEIVDGGHFFVHDAEGGDLALIEAKLKELKNKVGTSGATMEPRRGTLCAALFDDGNGPAWYRAKVLGSTPVGMRVLYVDHGNTATVKSSSLRPLDSSYFAFRPQARECVMAFMRVPSLEEEFGRDAAMGLNALGWGKELLGRALGRDADGRLMMALYESEDSESLNETLVAQGVARVASNADKLAASQPAKEMVARLRESQEHAHKSRANMWRYGDCQSDDEDDF 941          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A835YK22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK22_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.390e-63
Identity = 134/252 (53.17%), Postives = 165/252 (65.48%), Query Frame = 1
Query:  259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFD--DGKGPAWYRAKVIGATPLGTRV--RYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSE-GRMMMALYESEDTESINESLVAQGVARVASNADK-MATSQP--------AKDLVARLREAQEIAHKSRANMWRYGDCQSDDED 972
             +E  +S +L   RL +I DGG F L       L ++E K+  LK +VG  GA ME RR T CAALFD  DG G  W+RA++  A   GT V  RY+DHGNCATV A KLRPLD +YF   P A+ECV+A  RVPSL EE+G DAA  L EMAWGKEL  R +GRD+  G+ M+ALYE E  +SI E +V +G+AR+A  A+K +A +Q         A +LVARL+EAQE AHK R  MWRYGDC SDDE+
Sbjct:  774 EEEAPLSVELVAARLSDIEDGGAFHLQMGPPALLKQVEAKMAALKAQVGTGGAPMEHRRGTTCAALFDAGDGAGECWFRARIEAAARGGTAVTVRYIDHGNCATVPAGKLRPLDRTYFDLPPLAKECVLAYTRVPSLTEEWGGDAAGLLQEMAWGKELKARMLGRDATTGKPMVALYE-EGEQSIQEIMVGEGLARLAKRAEKAVAAAQQSGAPAAXAAAELVARLKEAQEAAHKGRVAMWRYGDCTSDDEN 1024          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A7S3UV14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV14_HETAK)

HSP 1 Score: 181 bits (459), Expect = 2.690e-50
Identity = 102/242 (42.15%), Postives = 151/242 (62.40%), Query Frame = 1
Query:  280 EDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKG--PAWYRAKV--IGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSE-GRMMMALYESEDTESINESLVAQGVARVASNADKMATSQP----AKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDDF 978
            E++T  R+ +I+DGG+ +LH A  + L ++   L  L  + G  GA    +R  L AALFDDG G  PAW+RA+V  + +     +V Y+DHGN A V  S+ RPL P   A  P AR+  +A ++ P++ E+FGRDA + L+E+AWG+EL+ RA GR  E G++ + L++ E   S+NE L++ GV R+  N  +MA  Q     + +    L+ +QE+A KSRANMWRYGD +SDDE+ +
Sbjct:   17 EEMTTVRVADIADGGNLYLHVAGDDGLARVGAGLARLAAEHGTGGAPCALKRGALVAALFDDGAGGGPAWFRARVAALDSKAKTAQVVYIDHGNRAAVPFSRTRPLPPELAAAPPAARDARLAGVKAPAVHEDFGRDAGMLLSELAWGRELICRAYGRCPETGQLRVVLHDGEVPASVNEGLISAGVCRI--NKKEMAQIQKQFPTSSEFFDALKASQEMAKKSRANMWRYGDVESDDEEPY 256          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A7S1C8D4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8D4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.690e-44
Identity = 96/231 (41.56%), Postives = 138/231 (59.74%), Query Frame = 1
Query:  301 LCEISDGGHFFLHDAEGNDLDK--IETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-----RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDC-QSDDE 969
            +C++ DGGHFF+H AE +D  +  ++ ++K L ++VG +GA  E ++  L AALFDDG GPAWYRA+V   T          V YVD+GN   V  ++LRPLD    A  P ARECV A +RVP+L  E+G +AA   +E  +G+ +L +   RD     ++ L++ E   S +E L+++G+ARV+    +       K LVA+L +AQE A     NM+RYGD   SDDE
Sbjct:  151 VCDVIDGGHFFVH-AEADDSKRAAVDARMKALTEEVGTAGAPCEPKKGALLAALFDDGSGPAWYRARVNAVTGDAAAGQTYEVTYVDYGNKDAVPIARLRPLDADLAAIPPLARECVTAFLRVPALGAEYGNEAAGCFHETVFGRRVLSKTHYRDESNNAVVTLFDEESDLSASEVLLSEGLARVSKRDTRRLRRGDDKALVAKLLKAQEEAKAGHRNMFRYGDPGDSDDE 380          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: H3GJC3_PHYRM (Uncharacterized protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GJC3_PHYRM)

HSP 1 Score: 172 bits (437), Expect = 6.310e-43
Identity = 101/238 (42.44%), Postives = 138/238 (57.98%), Query Frame = 1
Query:  259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
             Q     + + R +L EI +G HF++ +    +   +E K+K      G+SG   E RRN +CAALFDDG G AW RAKV    P G+ RVR++D+GN  TV A++LRPLD     F PQA+E   A ++  S  EEFG DAA+ L E+AWGK L  R  G +  GRM ++LY   D +S+ E+LV  G+ R    + +       K +V  L  AQE A K R ++W+YGD +SDDE
Sbjct:  686 KQAKTKDDVIPRVKLSEIVNGPHFYIQNVGDRNCAAVEEKMKAFTRTHGLSGKTFEVRRNAVCAALFDDGNGLAWNRAKVEYVHPDGSARVRFLDYGNETTVTANRLRPLDADVLQFPPQAKEASFAWIKPLSATEEFGADAAMRLGEVAWGKTLSCRIHGTEDHGRMQVSLY-LPDGKSVAENLVEAGLLRTDRKSLRSVLPYQ-KPVVDGLLNAQETAKKQRRSLWQYGDIESDDE 921          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A484E3N6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3N6_BRELC)

HSP 1 Score: 173 bits (438), Expect = 7.120e-43
Identity = 103/233 (44.21%), Postives = 136/233 (58.37%), Query Frame = 1
Query:  280 EDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDD 975
            E + R +L EI +G HF+  +    +   +E K+K      G+SG   E RRN +CAALFDDG G  W RAKV      G+ RVR++D+GN ATV A+ LRPLD     + PQA+E V A ++  +  EEFG DAAI L E+AWGK L  R  G D  GRM ++LY   D +S+  +LV  G+ R    A +   S   K LV  +  AQE+A K R  +W+YGD +SDDE D
Sbjct: 1570 EIIPRVKLSEIVNGTHFYFQNVGDRNCAAVEEKMKIFTRTHGLSGKTFEVRRNAVCAALFDDGNGSTWNRAKVEHVASDGSARVRFLDYGNQATVTANCLRPLDADALQYPPQAKEAVFAWIKPLAATEEFGSDAAIRLGEVAWGKILSCRIHGNDDHGRMQVSLY-LPDGKSVAGNLVEAGLLRTDRKALRSVLSFQ-KPLVEGILTAQEVAKKQRRCLWQYGDIESDDEQD 1800          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A3F2RSG8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSG8_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.380e-42
Identity = 98/230 (42.61%), Postives = 136/230 (59.13%), Query Frame = 1
Query:  286 LTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQP-AKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
            + R +L EI +G HF++ +    +   +E K+K      G++G   E RRN +CAALFDDG GPAW RAKV    P G+ RVR++D+GN  TV  ++LRPLD     F PQA+E   A ++  +  EEFG DAA+ + E+AWGK L  R    D  GR+ ++LY   D +S++ESLV  G+ R    A +    QP  K +V  L  AQ+ A   R  +W+YGD +SDDE
Sbjct:  648 IPRVKLSEIVNGAHFYIQNVADRNCAAVEEKMKAFTHTNGLAGKTFEVRRNAVCAALFDDGSGPAWNRAKVEYVHPDGSARVRFLDYGNETTVTPNRLRPLDADVLQFPPQAKEAAFAFIKPLAATEEFGSDAAMRIGEVAWGKTLSCRVHSTDDHGRLQVSLY-LPDGKSVSESLVEAGLLRTDRKALRFV--QPYQKPVVDGLVNAQDTAKAQRRCLWQYGDIESDDE 874          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A3M6VTR0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTR0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 7.310e-42
Identity = 105/258 (40.70%), Postives = 142/258 (55.04%), Query Frame = 1
Query:  199 FWISYIPGSHALFCFCIGK*NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
            +W SY   + A       +  Q     + + R +L EI  G HF++ +    +   +E K+K      G+SG A E RRNT+CAALFDD  GP W RAKV    P G+ RVR++D+GN  TV A+ LRPLD     F PQA+E   A ++  +  EEFG DAA+ L E+AWGK L  R    +  G M ++LY     +S++ESLV  G+ R    A +   S   K +V  L  AQE A K R  +W+YGD +SDDE
Sbjct:  679 YWASYDAQAVAK----AAQTKQVKTKDDVIPRVKLSEIISGTHFYIQNVGDRNCAAVEEKMKAFTRMHGLSGKAFEVRRNTVCAALFDDANGPTWNRAKVEYVHPDGSARVRFLDYGNETTVMANGLRPLDADVLQFPPQAKEATFAWIKPLAATEEFGADAAMRLGEVAWGKTLSCRIHSTEDHGCMQVSLY-LPGGKSVSESLVEAGLLRTDRKALRDVLSYQ-KPVVDGLLNAQESAKKQRLCLWQYGDIESDDE 930          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A1W0A2V7_9STRA (Nuclease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2V7_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.850e-40
Identity = 87/224 (38.84%), Postives = 134/224 (59.82%), Query Frame = 1
Query:  298 RLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
            RL EI++   F++ +     +  IE K+++   +VG+ G A E ++  LCAALFDDG+GP W RA+V      G +V+++D+GN   +  ++LRPLDPS      QA+ECV+  ++      EF  DAA  LN++AWGK +     G DS GR+ ++L  +   +++ ES++ QGVARV   A + A     K +V +L  AQE A + R  MW+YGD +SD++
Sbjct:  666 RLSEITNATTFYIQNVSDRSVATIEEKMRDFTQQVGLDGKAFEIKKGVLCAALFDDGQGPVWNRARVEAKPTSGVQVKFIDYGNTEILPPTRLRPLDPSLVHHPAQAKECVLGFIKPFDTNAEFAGDAAHMLNDLAWGKNMTALVHGHDSNGRLSVSLLVNN--KNVTESILEQGVARVDRKAIRYAEPYQ-KAIVDKLVTAQESARRRRLCMWQYGDVESDED 886          
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A2P4YKI6_9STRA (Nuclease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKI6_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.190e-40
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 1
Query:  403 GVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADK--MATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
            G++G A E RRN +CAALFDDG GPAW RAKV    P G+ RVR++D+GN  TV A++LRPLD     F PQA+E V A ++  +   EFG DAA+ + E+AWGK L  R  G D   RM ++LY   D +S+ E+L+  G+ R    A +  +   QP  D    L  AQE A K R  +W+YGD +SDDE
Sbjct:    9 GLAGKAFEVRRNAVCAALFDDGNGPAWNRAKVEYVHPDGSARVRFLDYGNDTTVTANRLRPLDADVLQFPPQAKEAVFAWIKPLAATAEFGTDAAMRIGEVAWGKTLSCRIHGTDDNNRMQVSLY-LPDGKSVAETLMEAGLLRTDRKALRHVLPYQQPVVD---GLINAQETAKKQRRCLWQYGDIESDDE 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXU2_9PHAE3.640e-12680.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YK22_9STRA4.390e-6353.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UV14_HETAK2.690e-5042.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1C8D4_9STRA5.690e-4441.56Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
H3GJC3_PHYRM6.310e-4342.44Uncharacterized protein n=19 Tax=Peronosporaceae T... [more]
A0A484E3N6_BRELC7.120e-4344.21Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3F2RSG8_9STRA1.380e-4242.61Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]
A0A3M6VTR0_9STRA7.310e-4240.70Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A1W0A2V7_9STRA1.850e-4038.84Nuclease n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
A0A2P4YKI6_9STRA2.190e-4046.88Nuclease n=1 Tax=Phytophthora palmivora var. palmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16898contigH-paniculata_contig16898:2673..5690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.7
Seed ortholog evalue9.1e-85
Seed eggNOG ortholog2880.D8LGL1
KEGG koko:K15979
KEGG Pathwayko05169,ko05203,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000932,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005829,GO:0005886,GO:0005911,GO:0006082,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006629,GO:0006720,GO:0006721,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009266,GO:0009408,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009685,GO:0009686,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010371,GO:0010372,GO:0010467,GO:0010468,GO:0010494,GO:0010565,GO:0010605,GO:0010629,GO:0010817,GO:0012505,GO:0016020,GO:0016053,GO:0016070,GO:0016071,GO:0016101,GO:0016102,GO:0016114,GO:0016787,GO:0016788,GO:0019216,GO:0019222,GO:0019439,GO:0019747,GO:0019752,GO:0030054,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0032350,GO:0032352,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034605,GO:0034641,GO:0034655,GO:0035770,GO:0036464,GO:0042221,GO:0042445,GO:0042446,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0043455,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045828,GO:0045834,GO:0046394,GO:0046483,GO:0046686,GO:0046700,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055044,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0090305,GO:0090351,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:1990904
EggNOG free text desc.gamete generation
EggNOG OGsCOG1525@1,KOG2039@2759
Ec32 ortholog descriptionTudor-SN RISC component
Ec32 orthologEc-10_002610.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size1418
Cds size561
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929337.1131911-UTR-H-paniculata_contig16898:2672..31091622929337.1131911-UTR-H-paniculata_contig16898:2672..3109Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 2673..3109 -
1691480820.5062141-UTR-H-paniculata_contig16898:2672..31091691480820.5062141-UTR-H-paniculata_contig16898:2672..3109Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 2673..3109 -
1622929337.1922922-UTR-H-paniculata_contig16898:4661..46821622929337.1922922-UTR-H-paniculata_contig16898:4661..4682Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 4662..4682 -
1691480820.5634797-UTR-H-paniculata_contig16898:4661..46821691480820.5634797-UTR-H-paniculata_contig16898:4661..4682Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 4662..4682 -
1622929337.2076132-UTR-H-paniculata_contig16898:5291..56901622929337.2076132-UTR-H-paniculata_contig16898:5291..5690Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 5292..5690 -
1691480820.5712125-UTR-H-paniculata_contig16898:5291..56901691480820.5712125-UTR-H-paniculata_contig16898:5291..5690Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16898 5292..5690 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929337.125833-CDS-H-paniculata_contig16898:3109..32231622929337.125833-CDS-H-paniculata_contig16898:3109..3223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 3110..3223 -
1691480820.5199609-CDS-H-paniculata_contig16898:3109..32231691480820.5199609-CDS-H-paniculata_contig16898:3109..3223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 3110..3223 -
1622929337.1395445-CDS-H-paniculata_contig16898:3507..36151622929337.1395445-CDS-H-paniculata_contig16898:3507..3615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 3508..3615 -
1691480820.5297463-CDS-H-paniculata_contig16898:3507..36151691480820.5297463-CDS-H-paniculata_contig16898:3507..3615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 3508..3615 -
1622929337.1533902-CDS-H-paniculata_contig16898:4021..41601622929337.1533902-CDS-H-paniculata_contig16898:4021..4160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 4022..4160 -
1691480820.5396202-CDS-H-paniculata_contig16898:4021..41601691480820.5396202-CDS-H-paniculata_contig16898:4021..4160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 4022..4160 -
1622929337.167917-CDS-H-paniculata_contig16898:4461..46611622929337.167917-CDS-H-paniculata_contig16898:4461..4661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 4462..4661 -
1691480820.5531807-CDS-H-paniculata_contig16898:4461..46611691480820.5531807-CDS-H-paniculata_contig16898:4461..4661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16898 4462..4661 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16898.3860.1prot_H-paniculata_contig16898.3860.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16898 3110..4661 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16898.3860.1

>prot_H-paniculata_contig16898.3860.1 ID=prot_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAAS
KLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKEL
LGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQP
AKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDDF*
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mRNA from alignment at H-paniculata_contig16898:2673..5690-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16898.3860.1 ID=mRNA_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3018bp|location=Sequence derived from alignment at H-paniculata_contig16898:2673..5690- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGACGTAATCCGCTTTCGCGCAGCCTTGCACCGCTTAGCATGATTCAGC AATAATACTTTTCCCGATAACCAAAAGCTATTTTATCCTCAATAAAAAGA TCGATCCTCAATTAGGATCGGCTATTTTTTGTAGCGATGCTGTTCTCGTG TTGCGGCGTAGATAACCTCGAGAAAATATTTTGTGGATTCTCTCCTTTTT TTGGATCTCCTACATCCCTGGCTCCCACGCGCTTTTCTGTTTTTGTATTG GAAAATAGAACCAGGAGTTTGTTGTGTCCGAGGACCTGACTCGATGGAGA CTGTGCGAGATCTCCGATGGAGGGCACTTTTTCCTGCATGACGCGGAGGG TAACGATCTGGACAAGATTGAGACCAAGCTCAAGGAACTGAAGGACAAGG TATATGAGTATGTGTATATTTATGTGTACATGCTAATGATGGATATCTGT CCTCGACAGACAGACTTTGAGTGATTATTTACCTCTTGTAAGGTGTTTTC CTCAAGAGGCCACCACGTATATATATATATGTATATATATTCCTTTAGTT AACGTATGTTTGTTTTTCAATTCATGATTTTTTTTTTATTATGTAAACTA TCATCATCGGATGTATTTTTTAAACATAAGTTTTGGTCCGTGTATGCTTA TCCATGAGATTAATGATGTGTCCCATGTGTATGTGGAAAACAGTGTACCC AAGCTTTTTCCAACAGGGAATATATGAGGATACTGTACTCTCTCTACGAA TTTAGTCCAAAGGTCGGGTTTGGGGACGTTGGCAGCATGTATTCTCTAAT ACTCGAGTGTCTTATGCCTAAAAAAGCGGCAACTTTTTCTGTCTCACGTA AATCAGATGACTTGATAGTCGTGTTTCCCCTCCCTCCTCGGCTTTGAGAT GTCTGAGGATTCGACAGACGTAGACGGGAATTAACTCCGGAAGGATAAAT AAAATAAAACGCCTCGACTTCTTTTTCTGGTATTTTTGGTTCTTTTTGTC AAACACAGGTCGGGGTATCAGGCGCCGCCATGGAGGCCCGTCGTAACACC CTGTGTGCCGCCCTGTTTGATGACGGGAAGGGGCCGGCCTGGTACAGGGC GAAGGTCATCGGTGCCACGCCTCTAGGCACGCGTGTTCGCTACGTAGACC ACGGTAACTGCGCCACGGTGGCAGCCTCTAAGCTGCGGCCGCTCGACCCG TCCTACTTTGCCTTCAAGCCTCAGGCCAGGTAAGGATGAACGGTATGAAA ATACGAAAGAGCTATCGCGAGCGCAGCGAGATGCTGCTCCGTCTCTCTCC GTACATGGGTCGATACCAGCCAGTAGCATGCATTGCATGGGCGTAGCCAT GATGACTCCACCGCACGTCGTTCGTATTAAGGGCTATTTCGTGTTTTACG TCCGGTATAGATGCAACTGCGTATCGCCCTACCCACCACACCCCCGTTGG TGATGGATGTAACTTTGCTGAGAAGTGAGTCTAGTTTTATGATACTCTTT CCCTCTCACCCTCGGTTGGTTGTATTTCAGGGAATGTGTGATGGCCTTGA TGCGAGTACCGTCGCTCGAAGAAGAGTTTGGTCGTGATGCTGCCATCAGC CTTAACGAAATGGCCTGGGGGAAGGAGCTGCTGGGTCGCGCCGTGGGCAG GGACTCAGAAGGTCGCATGGTGAGTCAGCTCAACAGACGAAGACAAACAG TGATGGTGCTCCCTTTCTGATTCTCGTGTCACTTGCCGTTTGGTTTTGCT TGTTGGTGTGTTTTTTTACGACTGACTATGTCAGGGTGAATCCAATATCA TTACTCCATTGCATTGATGCAGCTGACAGCAATATGCTATCGTACATATC TGTCGGCAAAATTGGATCATGGCCATTAAAGGGGGGCGTACTTTGGTAAT TGCATACTGTAGATGTTGGATCATTGACCACGCATTCTCGGGAGAGGAGG GAGGAGAGGGAGATGGGGGGAGTCAAATTGAAACCTTTCTGGGCAAACTT GAAGATGACCGGCTGTCCCTCCTTTTCGTAATCGTGTTTCCTTTGTTGTA CTGTGTGCCCGAAACACGTGTGCAGATGATGGCCCTGTACGAGTCGGAGG ACACGGAGAGCATCAATGAGTCCCTGGTAGCGCAGGGTGTGGCGCGTGTC GCTAGTAACGCCGATAAGATGGCCACTAGTCAGGTGTGAGGCATTTGTTT TATTTTTTTTTTGTTGTATGTAGGGTAATATCATTTTTACAGTGCGTTTT TGTTGTGTTTCCTTGTTATTTACCCTTTTATCGCGTCGGCCAGCTGTTCC AGTTGTAGTTTCATGATGTTGCGAAATAGATTAACCGTGGTCCATTCCGA TATAAAATAGATGATGATCCGTTTCCCCCCCCCCCGCCCTCCCATTCTGC TGCCGCTGTTCTGTTGCACACTCGATTGCTCTGTACACACAAACCTCCAA ATCAACCAATTGCACAGCCTGCTAAGGACCTCGTTGCTAGGCTGAGGGAG GCTCAGGAGATCGCCCACAAGAGCAGGGCAAACATGTGGCGCTACGGTGA CTGCCAGTCCGATGACGAGGATGACTTCTAGAGTAGTAATTAATTAATGG CAGCGAGATTCGTAATGTCAAGCGTTTTCTCTAGCCTTCTTTTTTCGTCT GCCCCGTAGGAATTGTGTGTTGTTTCGGTTTCATGCCGTGGGATAATTTG GATGATTTGTCTGAGAGCACGTTGCACAGATGGAGATTTATGAACGTTTT CACGTATCCCAACGTAGTAATCGTGTAGAGGATCGTTGGGAAAACAAATG CGAAATGACGAGTGGGGAAATTGGCTGGGGGGGTTATGGGGGGAGGCATA ACGCTAGCTTGTTCTGACCTACGATGTCTCTGGATCGTGACGTGCATGGC GGAAACGAAACAAAACAAGACAGGACATGTGTTGTTTATTCTTCCCCATC TGATTATTTACCTTCTGCAGCAAAACTGAGTTTTCTCCGTGTGAACAGTA CGCGCCTTGATGAGAGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig16898:2673..5690-

>mRNA_H-paniculata_contig16898.3860.1 ID=mRNA_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig16898:2673..5690- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCCCGTCGTAACACCCTGTGTGCCGCCCTGTTTGATGACGGGAA
GGGGCCGGCCTGGTACAGGGCGAAGGTCATCGGTGCCACGCCTCTAGGCA
CGCGTGTTCGCTACGTAGACCACGGTAACTGCGCCACGGTGGCAGCCTCT
AAGCTGCGGCCGCTCGACCCGTCCTACTTTGCCTTCAAGCCTCAGGCCAG
ATGGAGGCCCGTCGTAACACCCTGTGTGCCGCCCTGTTTGATGACGGGAA
GGGGCCGGCCTGGTACAGGGCGAAGGTCATCGGTGCCACGCCTCTAGGCA
CGCGTGTTCGCTACGTAGACCACGGTAACTGCGCCACGGTGGCAGCCTCT
AAGCTGCGGCCGCTCGACCCGTCCTACTTTGCCTTCAAGCCTCAGGCCAG
GGAATGTGTGATGGCCTTGATGCGAGTACCGTCGCTCGAAGAAGAGTTTG
GTCGTGATGCTGCCATCAGCCTTAACGAAATGGCCTGGGGGAAGGAGCTG
CTGGGTCGCGCCGTGGGCAGGGACTCAGAAGGTCGCATGGGAATGTGTGA
TGGCCTTGATGCGAGTACCGTCGCTCGAAGAAGAGTTTGGTCGTGATGCT
GCCATCAGCCTTAACGAAATGGCCTGGGGGAAGGAGCTGCTGGGTCGCGC
CGTGGGCAGGGACTCAGAAGGTCGCATGATGATGGCCCTGTACGAGTCGG
AGGACACGGAGAGCATCAATGAGTCCCTGGTAGCGCAGGGTGTGGCGCGT
GTCGCTAGTAACGCCGATAAGATGGCCACTAGTCAGATGATGGCCCTGTA
CGAGTCGGAGGACACGGAGAGCATCAATGAGTCCCTGGTAGCGCAGGGTG
TGGCGCGTGTCGCTAGTAACGCCGATAAGATGGCCACTAGTCAGCCTGCT
AAGGACCTCGTTGCTAGGCTGAGGGAGGCTCAGGAGATCGCCCACAAGAG
CAGGGCAAACATGTGGCGCTACGGTGACTGCCAGTCCGATGACGAGGATG
ACTTCTAGCCTGCTAAGGACCTCGTTGCTAGGCTGAGGGAGGCTCAGGAG
ATCGCCCACAAGAGCAGGGCAAACATGTGGCGCTACGGTGACTGCCAGTC
CGATGACGAGGATGACTTCTAG
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