mRNA_H-paniculata_contig16898.3860.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A6H5KXU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXU2_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 3.640e-126 Identity = 192/240 (80.00%), Postives = 217/240 (90.42%), Query Frame = 1
Query: 259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDDF 978
++EFVVSE+L ++RLCEI DGGHFF+HDAEG DL IE KLKELK+KVG SGA ME RR TLCAALFDDG GPAWYRAKV+G+TP+G RV YVDHGN ATV +S LRPLD SYFAF+PQARECVMA MRVPSLEEEFGRDAA+ LN + WGKELLGRA+GRD++GR+MMALYESED+ES+NE+LVAQGVARVASNADK+A SQPAK++VARLRE+QE AHKSRANMWRYGDCQSDDEDDF
Sbjct: 702 DKEFVVSEELNKYRLCEIVDGGHFFVHDAEGGDLALIEAKLKELKNKVGTSGATMEPRRGTLCAALFDDGNGPAWYRAKVLGSTPVGMRVLYVDHGNTATVKSSSLRPLDSSYFAFRPQARECVMAFMRVPSLEEEFGRDAAMGLNALGWGKELLGRALGRDADGRLMMALYESEDSESLNETLVAQGVARVASNADKLAASQPAKEMVARLRESQEHAHKSRANMWRYGDCQSDDEDDF 941
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A835YK22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK22_9STRA) HSP 1 Score: 231 bits (588), Expect = 4.390e-63 Identity = 134/252 (53.17%), Postives = 165/252 (65.48%), Query Frame = 1
Query: 259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFD--DGKGPAWYRAKVIGATPLGTRV--RYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSE-GRMMMALYESEDTESINESLVAQGVARVASNADK-MATSQP--------AKDLVARLREAQEIAHKSRANMWRYGDCQSDDED 972
+E +S +L RL +I DGG F L L ++E K+ LK +VG GA ME RR T CAALFD DG G W+RA++ A GT V RY+DHGNCATV A KLRPLD +YF P A+ECV+A RVPSL EE+G DAA L EMAWGKEL R +GRD+ G+ M+ALYE E +SI E +V +G+AR+A A+K +A +Q A +LVARL+EAQE AHK R MWRYGDC SDDE+
Sbjct: 774 EEEAPLSVELVAARLSDIEDGGAFHLQMGPPALLKQVEAKMAALKAQVGTGGAPMEHRRGTTCAALFDAGDGAGECWFRARIEAAARGGTAVTVRYIDHGNCATVPAGKLRPLDRTYFDLPPLAKECVLAYTRVPSLTEEWGGDAAGLLQEMAWGKELKARMLGRDATTGKPMVALYE-EGEQSIQEIMVGEGLARLAKRAEKAVAAAQQSGAPAAXAAAELVARLKEAQEAAHKGRVAMWRYGDCTSDDEN 1024
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A7S3UV14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV14_HETAK) HSP 1 Score: 181 bits (459), Expect = 2.690e-50 Identity = 102/242 (42.15%), Postives = 151/242 (62.40%), Query Frame = 1
Query: 280 EDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKG--PAWYRAKV--IGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSE-GRMMMALYESEDTESINESLVAQGVARVASNADKMATSQP----AKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDDF 978
E++T R+ +I+DGG+ +LH A + L ++ L L + G GA +R L AALFDDG G PAW+RA+V + + +V Y+DHGN A V S+ RPL P A P AR+ +A ++ P++ E+FGRDA + L+E+AWG+EL+ RA GR E G++ + L++ E S+NE L++ GV R+ N +MA Q + + L+ +QE+A KSRANMWRYGD +SDDE+ +
Sbjct: 17 EEMTTVRVADIADGGNLYLHVAGDDGLARVGAGLARLAAEHGTGGAPCALKRGALVAALFDDGAGGGPAWFRARVAALDSKAKTAQVVYIDHGNRAAVPFSRTRPLPPELAAAPPAARDARLAGVKAPAVHEDFGRDAGMLLSELAWGRELICRAYGRCPETGQLRVVLHDGEVPASVNEGLISAGVCRI--NKKEMAQIQKQFPTSSEFFDALKASQEMAKKSRANMWRYGDVESDDEEPY 256
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A7S1C8D4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8D4_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.690e-44 Identity = 96/231 (41.56%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 301 LCEISDGGHFFLHDAEGNDLDK--IETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-----RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDC-QSDDE 969
+C++ DGGHFF+H AE +D + ++ ++K L ++VG +GA E ++ L AALFDDG GPAWYRA+V T V YVD+GN V ++LRPLD A P ARECV A +RVP+L E+G +AA +E +G+ +L + RD ++ L++ E S +E L+++G+ARV+ + K LVA+L +AQE A NM+RYGD SDDE
Sbjct: 151 VCDVIDGGHFFVH-AEADDSKRAAVDARMKALTEEVGTAGAPCEPKKGALLAALFDDGSGPAWYRARVNAVTGDAAAGQTYEVTYVDYGNKDAVPIARLRPLDADLAAIPPLARECVTAFLRVPALGAEYGNEAAGCFHETVFGRRVLSKTHYRDESNNAVVTLFDEESDLSASEVLLSEGLARVSKRDTRRLRRGDDKALVAKLLKAQEEAKAGHRNMFRYGDPGDSDDE 380
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: H3GJC3_PHYRM (Uncharacterized protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GJC3_PHYRM) HSP 1 Score: 172 bits (437), Expect = 6.310e-43 Identity = 101/238 (42.44%), Postives = 138/238 (57.98%), Query Frame = 1
Query: 259 NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
Q + + R +L EI +G HF++ + + +E K+K G+SG E RRN +CAALFDDG G AW RAKV P G+ RVR++D+GN TV A++LRPLD F PQA+E A ++ S EEFG DAA+ L E+AWGK L R G + GRM ++LY D +S+ E+LV G+ R + + K +V L AQE A K R ++W+YGD +SDDE
Sbjct: 686 KQAKTKDDVIPRVKLSEIVNGPHFYIQNVGDRNCAAVEEKMKAFTRTHGLSGKTFEVRRNAVCAALFDDGNGLAWNRAKVEYVHPDGSARVRFLDYGNETTVTANRLRPLDADVLQFPPQAKEASFAWIKPLSATEEFGADAAMRLGEVAWGKTLSCRIHGTEDHGRMQVSLY-LPDGKSVAENLVEAGLLRTDRKSLRSVLPYQ-KPVVDGLLNAQETAKKQRRSLWQYGDIESDDE 921
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A484E3N6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3N6_BRELC) HSP 1 Score: 173 bits (438), Expect = 7.120e-43 Identity = 103/233 (44.21%), Postives = 136/233 (58.37%), Query Frame = 1
Query: 280 EDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDEDD 975
E + R +L EI +G HF+ + + +E K+K G+SG E RRN +CAALFDDG G W RAKV G+ RVR++D+GN ATV A+ LRPLD + PQA+E V A ++ + EEFG DAAI L E+AWGK L R G D GRM ++LY D +S+ +LV G+ R A + S K LV + AQE+A K R +W+YGD +SDDE D
Sbjct: 1570 EIIPRVKLSEIVNGTHFYFQNVGDRNCAAVEEKMKIFTRTHGLSGKTFEVRRNAVCAALFDDGNGSTWNRAKVEHVASDGSARVRFLDYGNQATVTANCLRPLDADALQYPPQAKEAVFAWIKPLAATEEFGSDAAIRLGEVAWGKILSCRIHGNDDHGRMQVSLY-LPDGKSVAGNLVEAGLLRTDRKALRSVLSFQ-KPLVEGILTAQEVAKKQRRCLWQYGDIESDDEQD 1800
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A3F2RSG8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSG8_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.380e-42 Identity = 98/230 (42.61%), Postives = 136/230 (59.13%), Query Frame = 1
Query: 286 LTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQP-AKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
+ R +L EI +G HF++ + + +E K+K G++G E RRN +CAALFDDG GPAW RAKV P G+ RVR++D+GN TV ++LRPLD F PQA+E A ++ + EEFG DAA+ + E+AWGK L R D GR+ ++LY D +S++ESLV G+ R A + QP K +V L AQ+ A R +W+YGD +SDDE
Sbjct: 648 IPRVKLSEIVNGAHFYIQNVADRNCAAVEEKMKAFTHTNGLAGKTFEVRRNAVCAALFDDGSGPAWNRAKVEYVHPDGSARVRFLDYGNETTVTPNRLRPLDADVLQFPPQAKEAAFAFIKPLAATEEFGSDAAMRIGEVAWGKTLSCRVHSTDDHGRLQVSLY-LPDGKSVSESLVEAGLLRTDRKALRFV--QPYQKPVVDGLVNAQDTAKAQRRCLWQYGDIESDDE 874
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A3M6VTR0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTR0_9STRA) HSP 1 Score: 169 bits (429), Expect = 7.310e-42 Identity = 105/258 (40.70%), Postives = 142/258 (55.04%), Query Frame = 1
Query: 199 FWISYIPGSHALFCFCIGK*NQEFVVSEDLTRWRLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
+W SY + A + Q + + R +L EI G HF++ + + +E K+K G+SG A E RRNT+CAALFDD GP W RAKV P G+ RVR++D+GN TV A+ LRPLD F PQA+E A ++ + EEFG DAA+ L E+AWGK L R + G M ++LY +S++ESLV G+ R A + S K +V L AQE A K R +W+YGD +SDDE
Sbjct: 679 YWASYDAQAVAK----AAQTKQVKTKDDVIPRVKLSEIISGTHFYIQNVGDRNCAAVEEKMKAFTRMHGLSGKAFEVRRNTVCAALFDDANGPTWNRAKVEYVHPDGSARVRFLDYGNETTVMANGLRPLDADVLQFPPQAKEATFAWIKPLAATEEFGADAAMRLGEVAWGKTLSCRIHSTEDHGCMQVSLY-LPGGKSVSESLVEAGLLRTDRKALRDVLSYQ-KPVVDGLLNAQESAKKQRLCLWQYGDIESDDE 930
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A1W0A2V7_9STRA (Nuclease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2V7_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.850e-40 Identity = 87/224 (38.84%), Postives = 134/224 (59.82%), Query Frame = 1
Query: 298 RLCEISDGGHFFLHDAEGNDLDKIETKLKELKDKVGVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADKMATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
RL EI++ F++ + + IE K+++ +VG+ G A E ++ LCAALFDDG+GP W RA+V G +V+++D+GN + ++LRPLDPS QA+ECV+ ++ EF DAA LN++AWGK + G DS GR+ ++L + +++ ES++ QGVARV A + A K +V +L AQE A + R MW+YGD +SD++
Sbjct: 666 RLSEITNATTFYIQNVSDRSVATIEEKMRDFTQQVGLDGKAFEIKKGVLCAALFDDGQGPVWNRARVEAKPTSGVQVKFIDYGNTEILPPTRLRPLDPSLVHHPAQAKECVLGFIKPFDTNAEFAGDAAHMLNDLAWGKNMTALVHGHDSNGRLSVSLLVNN--KNVTESILEQGVARVDRKAIRYAEPYQ-KAIVDKLVTAQESARRRRLCMWQYGDVESDED 886
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Match: A0A2P4YKI6_9STRA (Nuclease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKI6_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.190e-40 Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 1
Query: 403 GVSGAAMEARRNTLCAALFDDGKGPAWYRAKVIGATPLGT-RVRYVDHGNCATVAASKLRPLDPSYFAFKPQARECVMALMRVPSLEEEFGRDAAISLNEMAWGKELLGRAVGRDSEGRMMMALYESEDTESINESLVAQGVARVASNADK--MATSQPAKDLVARLREAQEIAHKSRANMWRYGDCQSDDE 969
G++G A E RRN +CAALFDDG GPAW RAKV P G+ RVR++D+GN TV A++LRPLD F PQA+E V A ++ + EFG DAA+ + E+AWGK L R G D RM ++LY D +S+ E+L+ G+ R A + + QP D L AQE A K R +W+YGD +SDDE
Sbjct: 9 GLAGKAFEVRRNAVCAALFDDGNGPAWNRAKVEYVHPDGSARVRFLDYGNDTTVTANRLRPLDADVLQFPPQAKEAVFAWIKPLAATAEFGTDAAMRIGEVAWGKTLSCRIHGTDDNNRMQVSLY-LPDGKSVAETLMEAGLLRTDRKALRHVLPYQQPVVD---GLINAQETAKKQRRCLWQYGDIESDDE 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16898.3860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16898.3860.1 >prot_H-paniculata_contig16898.3860.1 ID=prot_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp MEARRNTLCAALFDDGKGPAWYRAKVIGATPLGTRVRYVDHGNCATVAASback to top mRNA from alignment at H-paniculata_contig16898:2673..5690- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16898.3860.1 ID=mRNA_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3018bp|location=Sequence derived from alignment at H-paniculata_contig16898:2673..5690- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16898:2673..5690- >mRNA_H-paniculata_contig16898.3860.1 ID=mRNA_H-paniculata_contig16898.3860.1|Name=mRNA_H-paniculata_contig16898.3860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig16898:2673..5690- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |