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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2526 |
| Cds size | 2307 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16895.3858.1 >prot_H-paniculata_contig16895.3858.1 ID=prot_H-paniculata_contig16895.3858.1|Name=mRNA_H-paniculata_contig16895.3858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=769bp
MTTVVDTSSGTQNGSTDVPPASGSQTLLETGRQLAPALAPPSTPVTGTSK
DERVTSPEALKSTTEHPAPVEPYLADVAAPSHDLTVTPAAISCEGFESKM
GNKTVGKKAGVVIDEVDEGVAVVHAVPQLQSAAADAPAEAFVVVKPDVAD
AIPNGVTESPVSTASIIDADEKKDGDSAAERKPIAETGISTPAEKTDGPA
VDCTPEQRDICHSTVDVPAYPPAFSTENVEPASEKADTLVEPACKEDIAS
SSTVVEVVAEPAIVATVSADDDADPPIAAADAPAAVGGTEPVASDAYCTH
INTPVEEEPTLELAPVEDSVFEPSPASEAEIAPEATRARTLSDAAAATMN
VAAAVLEAAKELAAEPIIDSAIQFAPGPVDGVAAENTLIDSTTSEVSTPA
TLLAPAGKESAPGLPPAEKAVHCRGPAEPTPESAIEVTTVAKSVIALETS
RSKDTSKPMAERATVETAAPALVVEETAAPAPVVEEAAEPEAVEEAAARQ
LAIEEASASEPVVLEAVAPEPVDEVAAPEPAEEVAAPEPVDDVAAPEPVV
EEVAAPEPVVEETAAPEPIVEETAAPEPAVEETAAPEPVVEKTTTRELVV
EDMAAPEPVVEVTAAPEPAVEEAAAPEPAVEEAAAPEPVGEETAAPEPAV
EEAAAPEPAVDGTAAPEPVVEAAAPEPVVEEAAAPEPVVEEVAAPEPAVE
ETGAPEPVAEETATPEPVVEETATPEPVAEEAATPEPVAEEAATPEPVAE
EAATPEPVAEEAATPEPVT back to topmRNA from alignment at H-paniculata_contig16895:114..4603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig16895.3858.1 ID=mRNA_H-paniculata_contig16895.3858.1|Name=mRNA_H-paniculata_contig16895.3858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4490bp|location=Sequence derived from alignment at H-paniculata_contig16895:114..4603- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCACCTCATCACCACAAACTCAACAGCAGCCTAGAGGAGCAGGTGAGATG
TTTTACTCCTCAAGGAGGTATGTAGCTGTTGGGTATGCTTCTGGTTTGGG
GATCGTATTGGGTTGACGAGGTCTTGGCTGACGCGATCCTAGATTCGAAC
AAGAACATGTCTGGTTTGTCCTTCCATCCACAGCGGCTGTAATAGAACAA
GAAAGCACAACACCCAGGCGGTATAATAAAAAAATATAAGCTCTCGTAAC
GATGTCATGCATACCAGCTGGTTTAGAATAAGACTCCTTGAGAAGGGCTG
TCTCACGGAGTAGTGAGAGGTGGAACGTGCATGTCAGTGATGGTGCATAT
GCGAATACGTGATATTTTTGGTTCTGATCCAACCTGAACGGCAAGCAAGG
CGGTTGACAATTGTTCTGCTTCGGAGATGGAAAAGCCGTGATCCCATGGC
TGCTGCTACTTGATAGTTACCAGGTGTATGTCTTGGCTATCTCGAATCTG
CAGACATGATTATCATACAGCTGTGTTAGACGTCACCTGTGCAACGGTTC
ATGCAGTCCTATCCCGATTGTAGTCCCCGATCATTCAGCCCCGTTCTGGC
TAGGAGTATTAAACTAACTGTTTGCACGGTGCGTATCGAAGTCAATGCCT
TCCCCGTGTACTCGTGTAAGCTAGTGGTTTTCCTGAACAACCAAGTCGTG
GGGAAGTGAACAACCAAGTGGTGGGGAAGATTTGTTCCGGGTCACCGGAT
TGGTCCCACGCACGCTCCGCTCTTGTCCGCCATAGCTTTCGTGGTGTATA
TATTCTCTCAAAGTGACTGTATGGTCCAACTGCGTGTTCCGCCTCAACTA
TCCGCTGTATCATATTCGTTACACTCGCAGGCGAAACACCGAGGTCTAGG
AAGCTTCCCTGGAGAGCCCCACCAATTCAACTTCATTCATCGAAGCACCT
AGCTGCTCATCTGTCCTTTGAGCATACCATCCGACAGTAGTTGACCACTT
CGCCGTTTCCCCTCATCGTGCCCTACTTGTTACTCTTTGTAACTCCAACG
TGACTATGACGACAGTTGTGGACACTTCCAGCGGAACCCAGAACGGCAGC
ACGGACGTACCGCCCGCAAGTGGTTCTCAGACCTTGCTAGAAACTGGCCG
TCAACTAGCACCCGCTCTAGCACCCCCTTCAACACCCGTCACAGGAACTA
GTAAAGACGAACGTGTGACATCGCCCGAGGCTCTGAAATCGACCACAGAG
CACCCCGCCCCTGTTGAACCGTATCTCGCGGACGTGGCTGCACCGTCGCA
CGATCTAACCGTCACACCCGCCGCGATCTCTTGTGAGGGTTTCGAATCAA
AAATGGGGAACAAGACTGTGGGAAAGAAGGCGGGAGTAGTGATCGACGAG
GTCGACGAGGGTGTAGCTGTGGTGCATGCTGTTCCGCAATTGCAGTCCGC
CGCCGCGGATGCTCCCGCTGAAGCGTTCGTGGTCGTGAAGCCAGATGTGG
CGGATGCCATACCTAACGGAGTGACGGAAAGTCCCGTCTCTACGGCATCT
ATTATCGATGCTGACGAGAAAAAAGGTGAGCGATAGGGTTCAGGAGGGCT
AGGTGAAAAGTGATGCATGAAACCGAGTCTCACGTGTAGAAGTTTGGTTA
TCTTTCTGAAGAAGCGATATAAATGTATGGAACGTATGGTCGCGTGTCGC
ATGGTTGGAAGAGGGAATATCCTGCCATGCTGTGAGACTTGTTTTATCTG
TCTCGTCCGGCGTCACCTTGATATTTCGACAAACAAAATTCCACATGAAC
CTTAACATGAAATGTACCTGGTCTTTCCCTTCAATGCCCTTCATGATCGT
ACTGGGCAGTGTGGAAGACAGCTGTTGTGCTGCAAGCCTTTTAAGTACTT
TGGTCCGTCTGAAACTTTGTGTCGTGATCATAATTTGATTCTACCGGTTT
ATTTGTCGTTAATGAGAGTGCCCATTTCGATGACGTGGTAAGCATCAGTC
CACATTGAAGGAAATTTTGGATTTTACTATTTTTATCTCCCGCAAGCTGT
GTAATGTACCGTAGATGGCTGTCGCAACGGTACGGAACAGCATGAAGTAT
CCCAACCTGGATCACCCCATGTAGAACGACGTGTTGAAGTTCAATTCGTT
CATATACCTAACATGCCCTTCTTTCACCTCATGTCTGAAATTCACGATAC
GAATGTATTGCGAAATCGTGAGAGTTCGTCGGACGGTCGAAGTTGCGAGA
AAATTTGTCGTTGACCATCTTGTACGGCTTGGGTTCAGGTTTTCAGATGA
TCGGCTCCCCGATCGAGTTGGGGCGTGGCCGGTTCATGAGGATGCCATTC
GCGACGAGTCTAAAATTTGAAAACGCCAAAACTCTCGTCTCCGCATCTGT
AGAAACAGACGGGTTCTGGTATGGTCTGAAACATGCCTCTGTAAGCCATC
ACGTTCCTCTCTAAACATCGCTTCGTCGATAATGTCAGTCTCGAATTATC
TAGGGACTCAACTATTTGGAAGTGGGAACCTATAGGAGAGTGAAGGATAC
GTCGGGACTTGGACCAAGCTTGTTGCCGGCATGAACAATTTTGCCCGTTT
TGACTGTTGATCGCTGTCCTATGTATTACCCAACAGTCCCTCAACACCTC
GCTCACCACCGTCATGTACTATCTGTTCTACTCTAATTTCGACGTACCTA
CAGACGGTGATTCTGCGGCGGAAAGGAAACCTATTGCCGAAACTGGAATC
TCGACACCCGCAGAGAAGACGGACGGCCCTGCAGTTGATTGCACGCCGGA
GCAGCGCGATATCTGCCATTCCACCGTGGACGTCCCTGCATATCCACCTG
CGTTCAGTACGGAAAATGTCGAGCCAGCGTCCGAGAAAGCGGATACGCTC
GTGGAACCCGCGTGCAAAGAGGATATTGCGTCCTCTTCAACAGTGGTCGA
GGTCGTGGCCGAGCCCGCAATCGTAGCAACCGTTAGCGCAGACGACGACG
CGGATCCGCCCATTGCGGCTGCAGATGCTCCCGCTGCGGTGGGCGGTACA
GAACCCGTCGCAAGTGACGCGTACTGCACACACATCAACACTCCGGTAGA
GGAAGAGCCCACTCTTGAACTGGCGCCCGTAGAGGATTCAGTTTTCGAAC
CCTCTCCTGCTTCCGAGGCAGAGATTGCCCCCGAGGCCACCCGCGCCAGG
ACCTTGTCGGACGCAGCGGCGGCGACGATGAATGTAGCGGCCGCGGTACT
GGAGGCGGCGAAGGAGCTTGCAGCTGAACCGATAATCGACTCGGCCATTC
AGTTCGCCCCTGGGCCTGTAGATGGAGTTGCGGCTGAAAATACGCTAATC
GACTCCACCACAAGTGAGGTGTCTACGCCGGCAACGTTGTTGGCTCCAGC
GGGGAAGGAGTCGGCGCCTGGATTACCGCCTGCCGAAAAGGCAGTGCATT
GCCGCGGACCTGCTGAACCGACACCTGAGTCTGCGATCGAAGTTACGACG
GTCGCAAAGTCAGTTATCGCGTTAGAAACATCTCGGAGTAAAGACACCAG
CAAACCAATGGCGGAACGAGCGACGGTGGAAACCGCTGCGCCTGCACTCG
TGGTGGAGGAAACCGCTGCGCCTGCACCCGTAGTGGAGGAAGCCGCTGAA
CCGGAAGCGGTCGAGGAAGCCGCAGCTCGGCAACTGGCAATCGAGGAAGC
CTCTGCGTCGGAACCGGTGGTATTGGAAGCCGTCGCGCCAGAACCGGTAG
ATGAAGTTGCTGCGCCGGAACCGGCAGAGGAAGTTGCTGCGCCGGAACCG
GTCGATGACGTCGCTGCGCCGGAACCCGTAGTGGAGGAAGTCGCTGCACC
GGAACCCGTAGTGGAGGAAACCGCCGCGCCGGAACCCATAGTGGAGGAAA
CCGCCGCGCCGGAACCCGCAGTGGAGGAAACCGCCGCGCCGGAACCAGTT
GTGGAGAAAACGACGACTCGGGAGCTGGTGGTGGAGGATATGGCTGCGCC
GGAACCCGTCGTAGAGGTAACCGCTGCGCCGGAACCTGCGGTGGAGGAAG
CCGCTGCGCCAGAACCTGCGGTGGAGGAAGCCGCTGCGCCTGAACCCGTG
GGGGAGGAAACCGCTGCGCCAGAACCTGCGGTGGAGGAAGCCGCTGCGCC
GGAACCTGCGGTGGACGGAACCGCTGCGCCAGAACCCGTGGTGGAAGCCG
CTGCGCCAGAACCCGTGGTGGAGGAAGCCGCTGCGCCTGAACCCGTGGTG
GAGGAAGTCGCTGCTCCGGAACCTGCGGTGGAGGAAACCGGTGCGCCGGA
ACCGGTGGCGGAGGAAACCGCTACGCCGGAACCCGTGGTAGAGGAAACCG
CTACGCCGGAACCCGTGGCGGAGGAAGCCGCTACGCCGGAACCCGTGGCG
GAGGAAGCCGCTACGCCGGAACCCGTGGCGGAGGAAGCCGCTACGCCGGA
ACCCGTGGCGGAGGAAGCCGCTACGCCGGAACCCGTGACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig16895:114..4603- >mRNA_H-paniculata_contig16895.3858.1 ID=mRNA_H-paniculata_contig16895.3858.1|Name=mRNA_H-paniculata_contig16895.3858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4614bp|location=Sequence derived from alignment at H-paniculata_contig16895:114..4603- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGACAGTTGTGGACACTTCCAGCGGAACCCAGAACGGCAGCACGGA
CGTACCGCCCGCAAGTGGTTCTCAGACCTTGCTAGAAACTGGCCGTCAAC
TAGCACCCGCTCTAGCACCCCCTTCAACACCCGTCACAGGAACTAGTAAA
GACGAACGTGTGACATCGCCCGAGGCTCTGAAATCGACCACAGAGCACCC
CGCCCCTGTTGAACCGTATCTCGCGGACGTGGCTGCACCGTCGCACGATC
TAACCGTCACACCCGCCGCGATCTCTTGTGAGGGTTTCGAATCAAAAATG
GGGAACAAGACTGTGGGAAAGAAGGCGGGAGTAGTGATCGACGAGGTCGA
CGAGGGTGTAGCTGTGGTGCATGCTGTTCCGCAATTGCAGTCCGCCGCCG
CGGATGCTCCCGCTGAAGCGTTCGTGGTCGTGAAGCCAGATGTGGCGGAT
GCCATACCTAACGGAGTGACGGAAAGTCCCGTCTCTACGGCATCTATTAT
CGATGCTGACGAGAAAAAAGATGACGACAGTTGTGGACACTTCCAGCGGA
ACCCAGAACGGCAGCACGGACGTACCGCCCGCAAGTGGTTCTCAGACCTT
GCTAGAAACTGGCCGTCAACTAGCACCCGCTCTAGCACCCCCTTCAACAC
CCGTCACAGGAACTAGTAAAGACGAACGTGTGACATCGCCCGAGGCTCTG
AAATCGACCACAGAGCACCCCGCCCCTGTTGAACCGTATCTCGCGGACGT
GGCTGCACCGTCGCACGATCTAACCGTCACACCCGCCGCGATCTCTTGTG
AGGGTTTCGAATCAAAAATGGGGAACAAGACTGTGGGAAAGAAGGCGGGA
GTAGTGATCGACGAGGTCGACGAGGGTGTAGCTGTGGTGCATGCTGTTCC
GCAATTGCAGTCCGCCGCCGCGGATGCTCCCGCTGAAGCGTTCGTGGTCG
TGAAGCCAGATGTGGCGGATGCCATACCTAACGGAGTGACGGAAAGTCCC
GTCTCTACGGCATCTATTATCGATGCTGACGAGAAAAAAGACGGTGATTC
TGCGGCGGAAAGGAAACCTATTGCCGAAACTGGAATCTCGACACCCGCAG
AGAAGACGGACGGCCCTGCAGTTGATTGCACGCCGGAGCAGCGCGATATC
TGCCATTCCACCGTGGACGTCCCTGCATATCCACCTGCGTTCAGTACGGA
AAATGTCGAGCCAGCGTCCGAGAAAGCGGATACGCTCGTGGAACCCGCGT
GCAAAGAGGATATTGCGTCCTCTTCAACAGTGGTCGAGGTCGTGGCCGAG
CCCGCAATCGTAGCAACCGTTAGCGCAGACGACGACGCGGATCCGCCCAT
TGCGGCTGCAGATGCTCCCGCTGCGGTGGGCGGTACAGAACCCGTCGCAA
GTGACGCGTACTGCACACACATCAACACTCCGGTAGAGGAAGAGCCCACT
CTTGAACTGGCGCCCGTAGAGGATTCAGTTTTCGAACCCTCTCCTGCTTC
CGAGGCAGAGATTGCCCCCGAGGCCACCCGCGCCAGGACCTTGTCGGACG
CAGCGGCGGCGACGATGAATGTAGCGGCCGCGGTACTGGAGGCGGCGAAG
GAGCTTGCAGCTGAACCGATAATCGACTCGGCCATTCAGTTCGCCCCTGG
GCCTGTAGATGGAGTTGCGGCTGAAAATACGCTAATCGACTCCACCACAA
GTGAGGTGTCTACGCCGGCAACGTTGTTGGCTCCAGCGGGGAAGGAGTCG
GCGCCTGGATTACCGCCTGCCGAAAAGGCAGTGCATTGCCGCGGACCTGC
TGAACCGACACCTGAGTCTGCGATCGAAGTTACGACGGTCGCAAAGTCAG
TTATCGCGTTAGAAACATCTCGGAGTAAAGACACCAGCAAACCAATGGCG
GAACGAGCGACGGTGGAAACCGCTGCGCCTGCACTCGTGGTGGAGGAAAC
CGCTGCGCCTGCACCCGTAGTGGAGGAAGCCGCTGAACCGGAAGCGGTCG
AGGAAGCCGCAGCTCGGCAACTGGCAATCGAGGAAGCCTCTGCGTCGGAA
CCGGTGGTATTGGAAGCCGTCGCGCCAGAACCGGTAGATGAAGTTGCTGC
GCCGGAACCGGCAGAGGAAGTTGCTGCGCCGGAACCGGTCGATGACGTCG
CTGCGCCGGAACCCGTAGTGGAGGAAGTCGCTGCACCGGAACCCGTAGTG
GAGGAAACCGCCGCGCCGGAACCCATAGTGGAGGAAACCGCCGCGCCGGA
ACCCGCAGTGGAGGAAACCGCCGCGCCGGAACCAGTTGTGGAGAAAACGA
CGACTCGGGAGCTGGTGGTGGAGGATATGGCTGCGCCGGAACCCGTCGTA
GAGGTAACCGCTGCGCCGGAACCTGCGGTGGAGGAAGCCGCTGCGCCAGA
ACCTGCGGTGGAGGAAGCCGCTGCGCCTGAACCCGTGGGGGAGGAAACCG
CTGCGCCAGAACCTGCGGTGGAGGAAGCCGCTGCGCCGGAACCTGCGGTG
GACGGAACCGCTGCGCCAGAACCCGTGGTGGAAGCCGCTGCGCCAGAACC
CGTGGTGGAGGAAGCCGCTGCGCCTGAACCCGTGGTGGAGGAAGTCGCTG
CTCCGGAACCTGCGGTGGAGGAAACCGGTGCGCCGGAACCGGTGGCGGAG
GAAACCGCTACGCCGGAACCCGTGGTAGAGGAAACCGCTACGCCGGAACC
CGTGGCGGAGGAAGCCGCTACGCCGGAACCCGTGGCGGAGGAAGCCGCTA
CGCCGGAACCCGTGGCGGAGGAAGCCGCTACGCCGGAACCCGTGGCGGAG
GAAGCCGCTACGCCGGAACCCGTGACGACGGTGATTCTGCGGCGGAAAGG
AAACCTATTGCCGAAACTGGAATCTCGACACCCGCAGAGAAGACGGACGG
CCCTGCAGTTGATTGCACGCCGGAGCAGCGCGATATCTGCCATTCCACCG
TGGACGTCCCTGCATATCCACCTGCGTTCAGTACGGAAAATGTCGAGCCA
GCGTCCGAGAAAGCGGATACGCTCGTGGAACCCGCGTGCAAAGAGGATAT
TGCGTCCTCTTCAACAGTGGTCGAGGTCGTGGCCGAGCCCGCAATCGTAG
CAACCGTTAGCGCAGACGACGACGCGGATCCGCCCATTGCGGCTGCAGAT
GCTCCCGCTGCGGTGGGCGGTACAGAACCCGTCGCAAGTGACGCGTACTG
CACACACATCAACACTCCGGTAGAGGAAGAGCCCACTCTTGAACTGGCGC
CCGTAGAGGATTCAGTTTTCGAACCCTCTCCTGCTTCCGAGGCAGAGATT
GCCCCCGAGGCCACCCGCGCCAGGACCTTGTCGGACGCAGCGGCGGCGAC
GATGAATGTAGCGGCCGCGGTACTGGAGGCGGCGAAGGAGCTTGCAGCTG
AACCGATAATCGACTCGGCCATTCAGTTCGCCCCTGGGCCTGTAGATGGA
GTTGCGGCTGAAAATACGCTAATCGACTCCACCACAAGTGAGGTGTCTAC
GCCGGCAACGTTGTTGGCTCCAGCGGGGAAGGAGTCGGCGCCTGGATTAC
CGCCTGCCGAAAAGGCAGTGCATTGCCGCGGACCTGCTGAACCGACACCT
GAGTCTGCGATCGAAGTTACGACGGTCGCAAAGTCAGTTATCGCGTTAGA
AACATCTCGGAGTAAAGACACCAGCAAACCAATGGCGGAACGAGCGACGG
TGGAAACCGCTGCGCCTGCACTCGTGGTGGAGGAAACCGCTGCGCCTGCA
CCCGTAGTGGAGGAAGCCGCTGAACCGGAAGCGGTCGAGGAAGCCGCAGC
TCGGCAACTGGCAATCGAGGAAGCCTCTGCGTCGGAACCGGTGGTATTGG
AAGCCGTCGCGCCAGAACCGGTAGATGAAGTTGCTGCGCCGGAACCGGCA
GAGGAAGTTGCTGCGCCGGAACCGGTCGATGACGTCGCTGCGCCGGAACC
CGTAGTGGAGGAAGTCGCTGCACCGGAACCCGTAGTGGAGGAAACCGCCG
CGCCGGAACCCATAGTGGAGGAAACCGCCGCGCCGGAACCCGCAGTGGAG
GAAACCGCCGCGCCGGAACCAGTTGTGGAGAAAACGACGACTCGGGAGCT
GGTGGTGGAGGATATGGCTGCGCCGGAACCCGTCGTAGAGGTAACCGCTG
CGCCGGAACCTGCGGTGGAGGAAGCCGCTGCGCCAGAACCTGCGGTGGAG
GAAGCCGCTGCGCCTGAACCCGTGGGGGAGGAAACCGCTGCGCCAGAACC
TGCGGTGGAGGAAGCCGCTGCGCCGGAACCTGCGGTGGACGGAACCGCTG
CGCCAGAACCCGTGGTGGAAGCCGCTGCGCCAGAACCCGTGGTGGAGGAA
GCCGCTGCGCCTGAACCCGTGGTGGAGGAAGTCGCTGCTCCGGAACCTGC
GGTGGAGGAAACCGGTGCGCCGGAACCGGTGGCGGAGGAAACCGCTACGC
CGGAACCCGTGGTAGAGGAAACCGCTACGCCGGAACCCGTGGCGGAGGAA
GCCGCTACGCCGGAACCCGTGGCGGAGGAAGCCGCTACGCCGGAACCCGT
GGCGGAGGAAGCCGCTACGCCGGAACCCGTGGCGGAGGAAGCCGCTACGC
CGGAACCCGTGACG back to top
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