mRNA_H-paniculata_contig1689.3856.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A5B7BAX9_DAVIN (Putative lectin receptor kinase (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BAX9_DAVIN) HSP 1 Score: 148 bits (373), Expect = 3.910e-40 Identity = 63/145 (43.45%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+T AF+++C E G++ +F+ AYTP +NG+AER R++ MTR+ + + ++ WA+AV + Y R PT+ TP E W G P + HLR+FGC AY +R+KLDD+ +F+GY EES +Y++YNP
Sbjct: 6 LRSDRGGEYTSNAFQEYCREQGIRHQFTTAYTPQQNGIAERKNRTILNMTRTMLKEKGLSKQFWAEAVACSTYLPNRYPTKSVKHMTPQEAWSGYKPNVAHLRIFGCVAYAQVPEAKRKKLDDRGEKCIFIGYSEESKAYKLYNP 150
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6A3C4D2_HIBSY (FAD-binding Berberine family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C4D2_HIBSY) HSP 1 Score: 151 bits (382), Expect = 1.000e-39 Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+T K F +FC E+G+ + +A YTP +NGVAER R++ +M RS + + R WA+AVR AVY + R PT+ TP E W G P + HL++FGC AY Q R+KLDD+ +F+GYDE S +YR+YNP
Sbjct: 409 LRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNP 553
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY) HSP 1 Score: 151 bits (382), Expect = 1.010e-39 Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+T K F +FC E+G+ + +A YTP +NGVAER R++ +M RS + + R WA+AVR AVY + R PT+ TP E W G P + HL++FGC AY Q R+KLDD+ +F+GYDE S +YR+YNP
Sbjct: 351 LRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNP 495
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A2K3KQ52_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KQ52_TRIPR) HSP 1 Score: 142 bits (357), Expect = 1.150e-39 Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LR+D+G EF F++FC ENG+K++ +AAYTP +NG+AER R++ +M RS + + ++ + W +AV A+Y + R+P TP E W P + H +VFGC AY QR+KLDDK+ +FLG EES +YR+Y+P
Sbjct: 13 LRTDRGGEFNSNEFKEFCEENGIKRQLTAAYTPQQNGIAERKNRTIMDMVRSMLASKSIPKEFWPEAVNWAIYVLNRSPAAAIPDKTPEEAWSFNKPTVKHFKVFGCIAYTHVPDAQRKKLDDKSIKCIFLGISEESKAYRLYHP 157
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 150 bits (378), Expect = 3.510e-39 Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+T K F +FC E+G+ + + YTP +NGVAER R++ +M RS + + R WA+AVR AVY + R PT+ TP E W G P + HL++FGC AY Q R+KLDD+ +F+GYDE S +YR+YNP
Sbjct: 1377 LRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNP 1521
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 148 bits (373), Expect = 1.610e-38 Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+T K F +FC E+G+ + +A YTP +NGVAER R++ +M RS + + R WA+AVR AVY + R PT+ TP E W G P + H ++FGC AY R+KLDD+ +F+GYDE S +YR+YNP
Sbjct: 456 LRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNP 600
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A4Y2LAF7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LAF7_ARAVE) HSP 1 Score: 141 bits (356), Expect = 5.080e-38 Identity = 68/143 (47.55%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIY 429
LR+D G ++ GK F E G+ + + Y+P +NGV+ER R++ EM R + AN+ +R WA+A A Y R PT+P R TPY W P L H+RVFGC AY Q Q+RRKLDDKA G+FLGYD S YRIY
Sbjct: 73 LRNDNGGKYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMARCLLSDANLSQRFWAEAAMTATYLQNRLPTKPK-RKTPYVLWANRKPDLSHIRVFGCKAYACIQKQKRRKLDDKAVEGIFLGYDYRSKGYRIY 214
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 144 bits (364), Expect = 2.640e-37 Identity = 65/145 (44.83%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LRSD+G E+ AF+ +C ENG+K++ +AAYTP +NG+AER RS+ M R M+ ++ RR W +AV+ AV+ + R+P+ TP E+W P ++H+RVFGC AY + ++R KLD+K+ VF+G +ES +YR+YNP
Sbjct: 565 LRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNP 709
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A6D2I006_9BRAS (Integrase catalytic domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I006_9BRAS) HSP 1 Score: 144 bits (362), Expect = 4.320e-37 Identity = 66/145 (45.52%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
LR+D+G E+ KAF +FC ENG+K++ +AAYTP +NGVAER RSV MTR ++ ++ RR WA+AV+ AV+ + R+P+ TP EKW P +++L++FGC A+ + ++R KLD+K+ V G +ES +YR+YNP
Sbjct: 92 LRTDRGGEYCSKAFEEFCRENGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLLEMSVPRRFWAEAVQYAVHILNRSPSAALGDITPEEKWSQHKPSVEYLKIFGCVAFALVPYERRIKLDEKSVKCVLFGLSKESKAYRLYNP 236
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Match: A0A151R9Z3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9Z3_CAJCA) HSP 1 Score: 138 bits (347), Expect = 2.220e-36 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1 LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTRSKMITANMGRRCWAQAVRAAVYCIKRAPTRPHDRGTPYEKWQGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWMGVFLGYDEESPSYRIYNP 435
+RSD+G EFT F ++C E+G+K+ +A Y+P +NGVAER R++ +M RS + NM ++ WA+AV+ AVY R P TP E W G P + HLRVFG AY QQR KL+D++ +F+GYDE+S +Y++++P
Sbjct: 155 VRSDRGGEFTSVEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFIGYDEKSKAYKLFDP 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1689.3856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1689.3856.1 >prot_H-paniculata_contig1689.3856.1 ID=prot_H-paniculata_contig1689.3856.1|Name=mRNA_H-paniculata_contig1689.3856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp LRSDQGEEFTGKAFRQFCAENGVKQEFSAAYTPPKNGVAERSWRSVFEMTback to top mRNA from alignment at H-paniculata_contig1689:20553..20987- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1689.3856.1 ID=mRNA_H-paniculata_contig1689.3856.1|Name=mRNA_H-paniculata_contig1689.3856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=435bp|location=Sequence derived from alignment at H-paniculata_contig1689:20553..20987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1689:20553..20987- >mRNA_H-paniculata_contig1689.3856.1 ID=mRNA_H-paniculata_contig1689.3856.1|Name=mRNA_H-paniculata_contig1689.3856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at H-paniculata_contig1689:20553..20987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |