prot_H-paniculata_contig16886.3853.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16886.3853.1
Unique Nameprot_H-paniculata_contig16886.3853.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
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BLAST of mRNA_H-paniculata_contig16886.3853.1 vs. uniprot
Match: D8LEH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH6_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.330e-16
Identity = 49/78 (62.82%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:   21 YFRDSRLETTLGLIRSGQMFCEERHITADFVRRADVPRSNEQTTE----SGLVRHALLITDAALYMLEVEMLPRPKPP 94
            +FRD RLE TL LIRSGQ FC+ERHI  DFVRRA          E      L RHALL+TDAALY+LEVEMLP P PP
Sbjct:  272 FFRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTTVGLGKAELQPMDDLTRHALLLTDAALYLLEVEMLP-PVPP 348
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BLAST of mRNA_H-paniculata_contig16886.3853.1 vs. uniprot
Match: A0A6H5JCY2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY2_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 3.070e-9
Identity = 41/78 (52.56%), Postives = 45/78 (57.69%), Query Frame = 0 
Query:   21 YFRDSRLETTLGLIRSGQMFCEERHITADFVRRADVPRSNEQTTESGLV---------RHALLITDAALYMLEVEMLP 89
            +FRD RLE TL        FC+ERHI  DFVRRA        T  SG           RHALL+TDAALY+LEVEMLP
Sbjct:  561 FFRDPRLEATLA-------FCQERHIVVDFVRRA-----KPTTVASGKAELQPMDDHTRHALLLTDAALYLLEVEMLP 626
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16886.3853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH6_ECTSI1.330e-1662.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCY2_9PHAE3.070e-952.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16886contigH-paniculata_contig16886:251..4244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16886.3853.1mRNA_H-paniculata_contig16886.3853.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16886 251..4244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16886.3853.1 ID=prot_H-paniculata_contig16886.3853.1|Name=mRNA_H-paniculata_contig16886.3853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
GGPPRRSTSTSSRGSSVGSRYFRDSRLETTLGLIRSGQMFCEERHITADF
VRRADVPRSNEQTTESGLVRHALLITDAALYMLEVEMLPRPKPPGVATPP
PPPPPPPPSPPPPPPTSQTYSTAPAAGMGDGEARRADSLERLSSHMIDLG
IGHEAAQAVAPAAPWTPTGGLSTGSGQADRPPKSGSGG
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