mRNA_H-paniculata_contig1688.3851.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1688.3851.1
Unique NamemRNA_H-paniculata_contig1688.3851.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A6H5KAY1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAY1_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 6.080e-158
Identity = 248/320 (77.50%), Postives = 263/320 (82.19%), Query Frame = 2 
Query:   50 MDRTASSRRNNLSSQCICIARERAAVGRRWVSLVCLLVWVKSVDVVASAAWGRPNAPSGSSSSGGRISGSSKEGS-------------GGAFSFVSGNVPKVTMDETVDSEEQDIREEQRRGRWSFGHDHDPVVSAIKSMKDLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            M R   +RR +LS   +  A E A      V+++CLLV   + + +AS A            S GR  G+S  G              GG FSFVSG VPKVT+DETVDSEEQDIREEQRRGRWSFGHDHDPVVSAI+SMKDLFPNVRVS+DPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVV+KLALPEPELQFSTNGDTSKGVVIGMGDVN+GIEEFNLLLEY
Sbjct:    1 MARRMVARRRSLSGPRLSGAGEGA------VAILCLLVCFAAREALASGA------------SRGRAGGTSTAGXXXXXXXXXXXXXXGGGFSFVSGTVPKVTLDETVDSEEQDIREEQRRGRWSFGHDHDPVVSAIQSMKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVSKLALPEPELQFSTNGDTSKGVVIGMGDVNLGIEEFNLLLEY 302
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A835Z0G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G9_9STRA)

HSP 1 Score: 347 bits (891), Expect = 6.410e-114
Identity = 163/224 (72.77%), Postives = 202/224 (90.18%), Query Frame = 2 
Query:  302 NVPKVTMDET-VDSEEQDIREEQRRGRWSFGHDHDPVVSAIKSMKDLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            +VPKVT+DET V+S+++D R+ QR+GRW+F  D DPVVS IKS+KDLFP+V +S +PTT+LKLRK   PLKTV+TLGADYNT IG+WQFRS+WEDSIIGGRIS+AGRE+ML+KSWL+KVMDSEDVATRLKF+AA+NT+DWTAYAKFG RTERI+PLN+++GF L ++ PLDGN GHAKLEV+ +++LPEPEL+FST+GDTS GVV GMGD++IGI+E NLLLEY
Sbjct:   32 HVPKVTVDETAVESDDEDHRDAQRKGRWTFVDDADPVVSVIKSVKDLFPHVSLSCEPTTTLKLRKIFTPLKTVVTLGADYNTNIGIWQFRSSWEDSIIGGRISVAGRELMLSKSWLIKVMDSEDVATRLKFKAAVNTKDWTAYAKFGLRTERIAPLNVREGFTLCRRLPLDGNRGHAKLEVLARVSLPEPELRFSTDGDTSHGVVAGMGDIHIGIDELNLLLEY 255
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A4D9CS25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS25_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.810e-69
Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 2 
Query:  434 DLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            DL P  RV V+P T+LKLRKR YP KTV+ LGADYNTQIGVWQF+S+WED IIGGR+++ GRE+  +K+WL+ + D +D+ATRLKFRA I+T  W +YA+ GFRTERI PLN+KDG  L ++ PLDG  GHAKLEV   L LPEPE+++ST+    K +++G GD+ + I+E NL LEY
Sbjct:  115 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTD---KKRLIMGTGDILLSIDELNLCLEY 290
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A7S1BGQ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGQ1_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.540e-68
Identity = 107/184 (58.15%), Postives = 142/184 (77.17%), Query Frame = 2 
Query:  419 IKSMKDLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            I   +D FP ++V  DP T+LKLRKR  PLKTVLTLGAD+ TQ+GVWQF+S+WEDS+IGGR+++ GRE+ ++K+WLL V   ED+ TRL+ RAA++     AYA+FGFRTER+SP+N+ +GF L K FPLDG+NGHAK+EV    A PEPE+++ST+   S   ++GMGDV + IEE NL+LEY
Sbjct:   88 IDGHRDKFPGLKVRTDPRTTLKLRKRFRPLKTVLTLGADFETQLGVWQFKSSWEDSLIGGRLTLNGRELQMSKTWLLSVGAVEDLVTRLRLRAAVDLATGKAYARFGFRTERLSPINVVEGFTLKKMFPLDGSNGHAKMEVRANFAFPEPEIEYSTDNKKS---LVGMGDVEVAIEELNLVLEY 268
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: W7U3J5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3J5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.050e-67
Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 2 
Query:  434 DLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            DL P  RV V+P T+LKLRKR YP KTV+ LGADYNTQIGVWQF+S+WED IIGGR+++ GRE+  +K+WL+ + D +D+ATRLKFRA I+T  W +YA+ GFRTERI PLN+KDG  L ++ PLDG  GHAKLEV   L LPEPE+++ST+    K +++G GD+ + I+E NL LEY
Sbjct:  264 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEGHAKLEVRANLCLPEPEIEYSTD---KKRLIMGTGDILLSIDELNLCLEY 439
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: B7G885_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G885_PHATC)

HSP 1 Score: 228 bits (580), Expect = 3.590e-66
Identity = 103/177 (58.19%), Postives = 140/177 (79.10%), Query Frame = 2 
Query:  440 FPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            +P ++  V+PTT+LK+RK   PLKTV+ LGAD+NTQ+GVWQFRS+WED+IIGG++++AGRE+ L+KSW L V   ED+ TRL+FRAA++ + W AYA+ GFRTER+SP+N+ +GF L K+ PLDGN+GH KLEV    ALPEPE+++ST    S   +IGMGD+ + IEE NL+L+Y
Sbjct:  174 WPKIQCRVEPTTTLKIRKTFRPLKTVVQLGADFNTQLGVWQFRSSWEDAIIGGKLTLAGRELQLSKSWQLSVGAVEDLVTRLRFRAAVDLQTWKAYARVGFRTERLSPINVMEGFTLLKQLPLDGNHGHVKLEVKANFALPEPEIEYSTETQRS---LIGMGDIEVNIEELNLVLDY 347
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A7S1TRT3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRT3_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.920e-65
Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = 2 
Query:  422 KSMKDLFPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            +S  D FP VR   +P+T+LKLRKR YPLKT LTLGADYNTQ+G+WQF S+WED IIGGR+S  GRE+ L+K W+LK+ ++ D+  +L FRAA++T     YAKFG+R E++ P+N+++G    +K PLDG +GH KLEV  K ALPEP++++S+  D+   +++GMGDV + ++E NLL+EY
Sbjct:  131 RSWLDYFPRVRCHFEPSTTLKLRKRFYPLKTRLTLGADYNTQLGIWQFISSWEDQIIGGRLSFRGRELQLSKKWMLKIDEASDLIAKLTFRAALDTSTGATYAKFGWRFEKLEPINVREGIPWRQKLPLDGPDGHVKLEVRAKFALPEPDIEYSSTKDSEGSMIVGMGDVEVRVQELNLLMEY 313
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A7S1GJA6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJA6_CYCTE)

HSP 1 Score: 221 bits (563), Expect = 6.900e-65
Identity = 102/203 (50.25%), Postives = 150/203 (73.89%), Query Frame = 2 
Query:  383 SFGHDHDPVVSAIKSMKDL-------FPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            +F   + P  + ++S+++        FP ++  +DPTT+LK++K   PLKT++ LGA++NTQ+GVWQF+S+WED+IIGG++++AGRE+ LTKSW L +   ED+ TRL+FRAA++ +   AYA+ GFRTER+SP+N+ +GF L  + PLDG NGH KL V  KLALPEPE+++ST  + S   ++GMGD+ I +EE NLLL+Y
Sbjct:   55 AFNSKNQPQPTFVQSVQEWWSSNLPNFPKLQCRIDPTTTLKIQKTFRPLKTIVRLGAEFNTQLGVWQFKSSWEDAIIGGKLTLAGRELQLTKSWQLSMGPMEDLVTRLRFRAAVDLQTMKAYARVGFRTERLSPINMMEGFTLQHQIPLDGQNGHIKLGVKAKLALPEPEIEYSTENNRS---LVGMGDIEINVEELNLLLDY 254
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A7S2S8R8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8R8_9STRA)

HSP 1 Score: 218 bits (555), Expect = 5.460e-63
Identity = 98/177 (55.37%), Postives = 135/177 (76.27%), Query Frame = 2 
Query:  440 FPNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            FP ++  V+P T+LK+RK   PLKTV+ LGAD+NTQ+GVWQF+S+WEDS+IGG++++AGRE+ L+K+WLL V   ED+ TRL+FRAA++     AYA+ GFRTER+SP+N+ +GF L K+ PLDG  GH KLEV    A PEPE+++ST  + S    +GMGD+ + I+E NLLL+Y
Sbjct:  135 FPKLQCRVEPNTTLKVRKTFRPLKTVIRLGADFNTQLGVWQFKSSWEDSLIGGKLTLAGREIQLSKTWLLSVGAVEDLVTRLRFRAAVDLGTMKAYARLGFRTERLSPINVVEGFTLMKQLPLDGTQGHVKLEVKANFAFPEPEIEYSTENNRS---FVGMGDIEVNIDELNLLLDY 308
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BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Match: A0A1Z5JVG8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVG8_FISSO)

HSP 1 Score: 214 bits (545), Expect = 1.760e-61
Identity = 104/209 (49.76%), Postives = 144/209 (68.90%), Query Frame = 2 
Query:  377 RWSFGHDHDPVVSAIKSMKDLF-----------PNVRVSVDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEEFNLLLEY 970
            R+S  ++  P  S ++ + D +           P +   V+PTT+LKLRK   PL T++ LGA++NTQ+ VWQF+S WED+IIGG++++AGRE+ LTKSW L V   ED+ TRL+FRAA++   W AYA+ GFRTER+SP+NI +GF   K+ PLDG +GH KL+V    ALPEPE+++ST    S   +IGMGD+ + IEE NLLL+Y
Sbjct:  106 RYSSSYNRPPKRSLLQPLTDWWSANISPSVKSWPKIVCRVEPTTTLKLRKTFRPLGTIIRLGANFNTQLQVWQFKSDWEDAIIGGKLTLAGRELQLTKSWQLSVGAVEDLVTRLRFRAAVDLSTWKAYARVGFRTERLSPINIMEGFTFQKEVPLDGPSGHVKLQVKANFALPEPEIEYSTETQRS---LIGMGDIQVSIEELNLLLDY 311
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1688.3851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAY1_9PHAE6.080e-15877.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0G9_9STRA6.410e-11472.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CS25_9STRA2.810e-6959.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1BGQ1_9STRA1.540e-6858.15Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
W7U3J5_9STRA2.050e-6759.78Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
B7G885_PHATC3.590e-6658.19Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1TRT3_9STRA3.920e-6553.55Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1GJA6_CYCTE6.900e-6550.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2S8R8_9STRA5.460e-6355.37Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5JVG8_FISSO1.760e-6149.76Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1688contigH-paniculata_contig1688:5843..10042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.7
Seed ortholog evalue5.2e-130
Seed eggNOG ortholog2880.D7FKW6
Hectar predicted targeting categoryother localisation
EggNOG OGs2DZIP@1,2S72C@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001630.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1661
Cds size924
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1688.3851.1prot_H-paniculata_contig1688.3851.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1688 5892..9354 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929335.7859614-UTR-H-paniculata_contig1688:5842..58911622929335.7859614-UTR-H-paniculata_contig1688:5842..5891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1688 5843..5891 +
1691480819.8416545-UTR-H-paniculata_contig1688:5842..58911691480819.8416545-UTR-H-paniculata_contig1688:5842..5891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1688 5843..5891 +
1622929335.8424275-UTR-H-paniculata_contig1688:9354..100421622929335.8424275-UTR-H-paniculata_contig1688:9354..10042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1688 9355..10042 +
1691480819.8844755-UTR-H-paniculata_contig1688:9354..100421691480819.8844755-UTR-H-paniculata_contig1688:9354..10042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1688 9355..10042 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929335.8019497-CDS-H-paniculata_contig1688:5891..60661622929335.8019497-CDS-H-paniculata_contig1688:5891..6066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 5892..6066 +
1691480819.8534057-CDS-H-paniculata_contig1688:5891..60661691480819.8534057-CDS-H-paniculata_contig1688:5891..6066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 5892..6066 +
1622929335.8124619-CDS-H-paniculata_contig1688:6351..69481622929335.8124619-CDS-H-paniculata_contig1688:6351..6948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 6352..6948 +
1691480819.8629005-CDS-H-paniculata_contig1688:6351..69481691480819.8629005-CDS-H-paniculata_contig1688:6351..6948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 6352..6948 +
1622929335.8266335-CDS-H-paniculata_contig1688:9202..93541622929335.8266335-CDS-H-paniculata_contig1688:9202..9354Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 9203..9354 +
1691480819.8744395-CDS-H-paniculata_contig1688:9202..93541691480819.8744395-CDS-H-paniculata_contig1688:9202..9354Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1688 9203..9354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1688.3851.1

>prot_H-paniculata_contig1688.3851.1 ID=prot_H-paniculata_contig1688.3851.1|Name=mRNA_H-paniculata_contig1688.3851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MDRTASSRRNNLSSQCICIARERAAVGRRWVSLVCLLVWVKSVDVVASAA
WGRPNAPSGSSSSGGRISGSSKEGSGGAFSFVSGNVPKVTMDETVDSEEQ
DIREEQRRGRWSFGHDHDPVVSAIKSMKDLFPNVRVSVDPTTSLKLRKRI
YPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLL
KVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKK
FPLDGNNGHAKLEVVTKLALPEPELQFSTNGDTSKGVVIGMGDVNIGIEE
FNLLLEY*
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mRNA from alignment at H-paniculata_contig1688:5843..10042+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1688.3851.1 ID=mRNA_H-paniculata_contig1688.3851.1|Name=mRNA_H-paniculata_contig1688.3851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4200bp|location=Sequence derived from alignment at H-paniculata_contig1688:5843..10042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGGCTGTCTTCTTTGTGTGATAACTCGTGTGGCATTGTCTTGGTGTCA
TGGATAGAACTGCCTCTTCTAGAAGAAATAATTTAAGTTCTCAATGTATC
TGTATTGCCAGAGAAAGGGCAGCTGTTGGGCGGCGATGGGTATCCCTAGT
GTGCCTGCTGGTATGGGTAAAATCTGTTGACGTGGTAGCATCGGCAGCGT
GGGGGAGGCCAAACGCTCCATCAGGTCTGTGCCCATTGACAGTCTCACAT
AGGCAGCAAAGGGAAAACTTATGCTTCAGATCGACTGCTTAAGGAAGCTA
TTATTGTGCAGCTGTGTAGTTGTGCATGCCAATGATCTAATACTCTAGTT
TGCTTTCTTGTTCAACGTTAACTGGGTCTTTGTGTCGGGCGTTATTGTTG
GGGCCTTGCTCCACACTGTGTTACACCAGGACCAAAGACTTGGGGGACGT
TCTTGTAGCATTGATCGATCTCAGCCAAGTCTCCTGTATTCGCGAAATAA
TGTTTGAAGGTTCGTCATCTTCAGGAGGTCGCATATCGGGAAGCAGCAAA
GAAGGGTCCGGTGGAGCCTTTTCCTTCGTGAGCGGAAACGTTCCAAAAGT
AACCATGGATGAGACAGTGGACTCAGAGGAGCAAGACATACGGGAAGAGC
AACGCAGGGGGCGGTGGAGCTTTGGGCATGACCACGACCCGGTGGTTTCC
GCTATCAAAAGTATGAAAGACCTGTTCCCCAATGTACGCGTATCGGTGGA
CCCGACCACCTCCCTCAAGCTGCGAAAGCGCATCTACCCGCTAAAGACGG
TTCTTACGTTGGGAGCCGACTACAATACGCAAATCGGTGTGTGGCAATTC
CGGTCTACTTGGGAGGACTCCATCATAGGAGGTCGAATTAGCATTGCAGG
ACGTGAAGTAATGCTGACCAAGTCGTGGTTGTTGAAGGTGATGGACTCGG
AAGACGTTGCGACACGATTGAAGTTCCGAGCAGCGATCAACACACGAGAC
TGGACGGCATATGCTAAGTTCGGTTTCCGCACTGAGCGAATCTCGCCTCT
CAATATAAAGGACGGTTTCCAGTTGGCGAAGAAATTTCCACTCGACGGGA
ACAACGGTGAGCTTCTGCCACGGTTTTGCCGCAGTTAAATGGACGGGAAA
ATATATGGGGTTGCCACGGCGTCGGGTTTTACACACAGTTGGTGATGACG
GGAGGCTACTAGAAGATATTTGGGCTCTTGCGCCCAAGAGCTCCTTTTTT
TATTGTTGCCAATGTGCATTGAGGTTCACGTTTCCGTTGTGACGAAACCA
GGTTGGTCTTTATGGCTACTACCCATTGAACCTGTGCTCTCCTGGCAAGA
TCTCGGCTCTGTGCAAACCGCCGGAAAATATAGATTCGAGCCATTTGCTC
TTCCGCCATAGAGTCTGTGTTCCTCGCCCTTGCCGATTTTTCGGTGCTGG
TCCTTTTCGTTGCTAATGTTCGTCTGCCGTTCTAAAATTGCGGTGTCCTC
ACCCATACGTTGCCTGAGTCCCAAATACTCCATCGCAGTTTGAATTACAA
TCCCTACGAACTGGGTCCACGCATCAAACCCCCGAAAGTGTGTGTAAGAT
GGTTTGTCCACGAGTATTGCATCAATTTGACCGCACAAAGCACTAGAGAG
ATCCTCATAGTGCAGGATAGATACTGTTGACCTGGTTTGCAATACTCCAA
CTTGTGAGCTGCGTAGTAGTGCACAAAGCAACGGGCCTGCAAACGTGCAG
GATAAATAAACAACGATAAAAAATCTACGAATGTCCGAAAACTTGGAAAA
AAACTGACGTCGCGGCTGCATTCGTGATAGACGTATAGACTGATTTTCAC
ATTCGGGCATGTGGTGAAACTCCCAAGCGCGAATTTTCGTTCCTGAACTC
GCCATGACGCCGACTCTAATCCAAAAACAGTGTTTTCGCGCTTTCGCGCT
TTCGCGACTCATACTGAAGGCAGTGTAATAAGATATTCGACCGCGGTGGC
GAGTCCTGTTGATGTTTGTCGGCTTTTTCACGCTGATTTTTCGATATTTT
TTACGATACCTCACACGCGTGTTCCTTACTTGGTTACCCGTGTCGACGCC
TTTTTACCGAATGCAGTGAAGTTTTCCCTCGTCGGTTTTCCAGGGCCCTA
TGCCACTATACTGTCTACACGGCCTTGGGACCCCCGAAAACCGGTGAAAA
TATACGCGATAAGTGCAGGCGACAAGCCCTCGACTTGGAAATTTTACTGA
GGATCCCGTGTTCGAAATTTTGTTCCCAAAGTCGCGAAAACGCCGCCACT
CTATTTCAGAAACAAGCTTTTATTGTCGCTTGCAAGGCTTCTACTGAAGT
CAATATAGTAGCGCATTTTATGGCGGTTGCGAGTGCTCTTTATCATTTTG
CGATTTCTCATTCGGTTTCTTCAAGGCCTTGGACGAAAATTCGCGTACGT
GTTTCTTGCTTGGTAGCCGAGGTCATTCGTATTGGGCCTTTTCTTCTTTC
GGTTTTGTGGTCACTAGTTATCTGGGATCCGCAGGTCCGTTTGGCTGAAA
AAAACACTTCCTCCGACCGAAAAATACATTGGCGCTACACAAAACCGGTG
ACCAAAACCGAAAGAAAAAAACGAACAACACGGATGGCTTTGAGTACCAA
ACAAGGAACACGTGTGCGAAGTTTCGTCCAGAACCTCGAAAAAACTGACG
AGAAATCCTTAAACAAGCTATTCTGGAATCGTCTCGTGAAACACCCTGTA
ACCGTAACCCGATAGCTCGATCTTGGATTCTCACGGAGCCGGCAGCCATG
TAGTGCGGGGTCGTATTGTACTTTGTATTCTTGTCTCCTCGGCGCTACAG
CTGTTATTCTGCATTATCATACATTGTAATGTAAATAATATTCGATTTGT
TGTATGTCCCCGGCGTGTTGGAGGTATCCCGAGGAACTGTGTGTGATGTA
CTTTTTTGAAGCATATGGCGTAACCAGTAGGATATTGTAGTTAGTGTTGG
TTCGAGTTGAACGTGCAATCAGGCATGCCAGTGGCCGTCGTGTTACAGCT
TCCATAAACGTCACGTTGGATGTTACTGTCAGTGCCGTGGGATGTCGACT
TGTCGCTGGCGCCCTGGTCTGACAATGACTCGGCTGGCGCATGTACCTCC
ATTCTGTTTCTGCAAACGCCGCCACCCATATAAAAAACCATAGTTGTGAT
ATGGGCTCATTACCACCAAATGGTTCACTCACACTAACCACGAGAGGTTT
TGTCCTATCGTATGCGCTGTCAGTTTTAATGTGCGCAATTGACAACGGAT
ATGAACATGCCATGGATATATTCGTATGGTTGTTGTTCTGTTCTGCCGTC
CATTCCCTAGGTCATGCCAAACTGGAGGTAGTAACAAAGCTTGCTCTACC
GGAGCCGGAGCTCCAATTCAGTACAAATGGAGACACCAGCAAGGGAGTAG
TGATTGGCATGGGTGATGTAAATATTGGAATAGAGGAGTTCAACCTGTTG
CTTGAGTACTAGATGGGATAAACGGAGAGTTTTTTTAGCGTGTTTTCATC
TGATAGGCAGCTGATGACCGATCGGATACGTGGAACACTTCTGTGGCAGT
CAAAATACATTATGGCGAGAGATCTTATCTACTTCGTACTACGTATTTAA
CGGGAGTTTGAAGCGTGAGATGCGGCATTAGCTTTTGTTTTAGTCGATGC
ATGTGAAACCCAGCCATGCATTCGTTTCACCAACTGGAAGAGTATCACCG
TTTCCTCCCTTTCTTGGTTGGTGACCTAAACCAGCAAACTCTTCCATTTC
TTACACAATAATAATTGAAGGTATCATCATTGTGCAACGACGCATGCAAG
GGTATTTTATGTGTAGGTGGGGTGTTTCCCACAGTTCAGTCGAATAAGCG
GTATTCTCCTGTGTCATCTTCGGCTTGAAATTCTTGTTGCACCCTTTTGT
ACCAAGGTGGTATCTTTACCAAATCAGGAAGTTCGTCGCAAGCAACAAGA
AGAGTAGGTAACCCCCAACATTGTCGCGTGTGAGGTACTGGATGAAGGAA
GCGCACGCCAGAGATGGAGAAGAATTCAGAAATTTGCAGAAGGGGCCGTA
TGCCCGCTTGTTGCTGACAACACACACTGCACCTGAACGATGCATATCAT
CTATTGCACGCCAAACCGTTTGTTTTCTGTGTCCCACAAGTCTGGGGGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig1688:5843..10042+

>mRNA_H-paniculata_contig1688.3851.1 ID=mRNA_H-paniculata_contig1688.3851.1|Name=mRNA_H-paniculata_contig1688.3851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig1688:5843..10042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATAGAACTGCCTCTTCTAGAAGAAATAATTTAAGTTCTCAATGTAT
CTGTATTGCCAGAGAAAGGGCAGCTGTTGGGCGGCGATGGGTATCCCTAG
TGTGCCTGCTGGTATGGGTAAAATCTGTTGACGTGGTAGCATCGGCAGCG
TGGGGGAGGCCAAACGCTCCATCAGATGGATAGAACTGCCTCTTCTAGAA
GAAATAATTTAAGTTCTCAATGTATCTGTATTGCCAGAGAAAGGGCAGCT
GTTGGGCGGCGATGGGTATCCCTAGTGTGCCTGCTGGTATGGGTAAAATC
TGTTGACGTGGTAGCATCGGCAGCGTGGGGGAGGCCAAACGCTCCATCAG
GTTCGTCATCTTCAGGAGGTCGCATATCGGGAAGCAGCAAAGAAGGGTCC
GGTGGAGCCTTTTCCTTCGTGAGCGGAAACGTTCCAAAAGTAACCATGGA
TGAGACAGTGGACTCAGAGGAGCAAGACATACGGGAAGAGCAACGCAGGG
GGCGGTGGAGCTTTGGGCATGACCACGACCCGGTGGTTTCCGCTATCAAA
AGTATGAAAGACCTGTTCCCCAATGTACGCGTATCGGTGGACCCGACCAC
CTCCCTCAAGCTGCGAAAGCGCATCTACCCGCTAAAGACGGTTCTTACGT
TGGGAGCCGACTACAATACGCAAATCGGTGTGTGGCAATTCCGGTCTACT
TGGGAGGACTCCATCATAGGAGGTCGAATTAGCATTGCAGGACGTGAAGT
AATGCTGACCAAGTCGTGGTTGTTGAAGGTGATGGACTCGGAAGACGTTG
CGACACGATTGAAGTTCCGAGCAGCGATCAACACACGAGACTGGACGGCA
TATGCTAAGTTCGGTTTCCGCACTGAGCGAATCTCGCCTCTCAATATAAA
GGACGGTTTCCAGTTGGCGAAGAAATTTCCACTCGACGGGAACAACGGTT
CGTCATCTTCAGGAGGTCGCATATCGGGAAGCAGCAAAGAAGGGTCCGGT
GGAGCCTTTTCCTTCGTGAGCGGAAACGTTCCAAAAGTAACCATGGATGA
GACAGTGGACTCAGAGGAGCAAGACATACGGGAAGAGCAACGCAGGGGGC
GGTGGAGCTTTGGGCATGACCACGACCCGGTGGTTTCCGCTATCAAAAGT
ATGAAAGACCTGTTCCCCAATGTACGCGTATCGGTGGACCCGACCACCTC
CCTCAAGCTGCGAAAGCGCATCTACCCGCTAAAGACGGTTCTTACGTTGG
GAGCCGACTACAATACGCAAATCGGTGTGTGGCAATTCCGGTCTACTTGG
GAGGACTCCATCATAGGAGGTCGAATTAGCATTGCAGGACGTGAAGTAAT
GCTGACCAAGTCGTGGTTGTTGAAGGTGATGGACTCGGAAGACGTTGCGA
CACGATTGAAGTTCCGAGCAGCGATCAACACACGAGACTGGACGGCATAT
GCTAAGTTCGGTTTCCGCACTGAGCGAATCTCGCCTCTCAATATAAAGGA
CGGTTTCCAGTTGGCGAAGAAATTTCCACTCGACGGGAACAACGGTCATG
CCAAACTGGAGGTAGTAACAAAGCTTGCTCTACCGGAGCCGGAGCTCCAA
TTCAGTACAAATGGAGACACCAGCAAGGGAGTAGTGATTGGCATGGGTGA
TGTAAATATTGGAATAGAGGAGTTCAACCTGTTGCTTGAGTACTAGGTCA
TGCCAAACTGGAGGTAGTAACAAAGCTTGCTCTACCGGAGCCGGAGCTCC
AATTCAGTACAAATGGAGACACCAGCAAGGGAGTAGTGATTGGCATGGGT
GATGTAAATATTGGAATAGAGGAGTTCAACCTGTTGCTTGAGTACTAG
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