prot_H-paniculata_contig16879.3849.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16879.3849.1
Unique Nameprot_H-paniculata_contig16879.3849.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length449
Homology
BLAST of mRNA_H-paniculata_contig16879.3849.1 vs. uniprot
Match: A0A6H5KR73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR73_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.780e-30
Identity = 131/423 (30.97%), Postives = 176/423 (41.61%), Query Frame = 0
Query:   40 TSTGADDANANAGDEVGIVRRVLATVAAPA---VWMLVSVPDWFSDAVFQVKSTDGSDKRGL----VLVHDPPASLEFACNLLAPWISTPLPTTEASSVSSSFM--WLRRIARMACRLDSPFPGRVVSRPCYSSAIPRQQKGQDPAAASSSSWVAFGMQKTLGLLGFGRGXXXXXXXXXXXXXXXXXXXTAKAGGSFPASILGSSYSTSGCWCEPGGEGPCTIRAPPGRDPCLFIDVAR-SKRWGHPKKRG---AEYVDASSGLHVSTYLVPLPTGLMDVMGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERVGTAVGRMWRAWSAAAVDVLFAGGGSDDGEGGIFLASVVVPVYLTRLVIGIALLWLARPLSESRVFHHVLGALLGGGVAAVA 449
            T+    DA ++AG + GI  R LA VA+P      ML  +P WFSDAVF+V    GS  + L    VLV + P  LE AC+L+AP +    P   A+SV+++ M  ++  + R  C  D+PFPG+VVSRPC      R        A   S WV+                                  +A AGG               C C   G GPCTIRA PGR+PCL ++V   +KR G     G   AE V+++S + + TY +P                                                                  S R  +A G+   A + A +D L A   +    G     S+ VPVY   L+ G+ALL +A+PLSESR FH++L ALLGG V A A
Sbjct:  258 TAGSTQDAASSAGSDAGIGWRALAVVASPVHHLFGMLGGMPGWFSDAVFEVNQKGGSAYKDLSQRLVLVENRPRLLELACSLVAPSLH---PQPPAASVTAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPC------RVATEAKATAQQPSGWVS--------------------------TMAPAWVSSAAAGGGDAXXXXXXXXXXXVCECA--GRGPCTIRASPGREPCLHVEVGDVNKRGGRSGGGGGFSAESVESTSAVRLRTYSLPTTAA-----------------------------------------------------------GAASPRASSAEGQESAA-ATAVLDALVALHAAAVRLG--MPPSIAVPVYAAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAA 581          
BLAST of mRNA_H-paniculata_contig16879.3849.1 vs. uniprot
Match: D8LRC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC3_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.860e-30
Identity = 132/420 (31.43%), Postives = 176/420 (41.90%), Query Frame = 0
Query:   46 DANANAGDEVGIVRRVLATVAAPA---VWMLVSVPDWFSDAVFQVKSTDGSD----KRGLVLVHDPPASLEFACNLLAPWISTPLPTTEASSVSSSFM--WLRRIARMACRLDSPFPGRVVSRPCYSSAIPRQQKGQDPAAASSSSWVAFGMQKTLGLLGFGRGXXXXXXXXXXXXXXXXXXXTAKAGGSFPASILGSSYSTSGCWCEPGGEGPCTIRAPPGRDPCLFIDVAR-SKRWGHPKKR------GAEYVDASSGLHVSTYLVPLPTGLMDVMGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERVGTAVGRMWRAWSAAAVDVLFAGGGSDDGEGGIFLASVVVPVYLTRLVIGIALLWLARPLSESRVFHHVLGALLGGGVAAVA 449
            DA ++AG + GI  + LA V AP      ML  +P WFSDAVF+V    GS      + LVLV + P  LE AC+L+AP +    P   A++ +++ M  ++  + R  C  D+PFPG+VVSRPC      R       +A   S WV+   Q  +                           ++ AGG    S +        C C   G GPCTIRA PGR+PCL ++V   SKR G            AE V+++S + + TY       L     G                                                       S R  +A GR   A +A + D L A   S    G     SV VPVY   L+ G+ALL +A+PLSESR FH++L ALLGG V A A
Sbjct:   73 DAASSAGSDAGIGWQALAVVTAPVSHLFGMLGGMPGWFSDAVFEVNQKGGSAYNDLSQRLVLVENRPRLLELACSLVAPPLHPQPPAAPATAAAAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPC------RVATEAKASAQQPSGWVSTMAQAWV---------------------------SSAAGGGDAISAIXXXXXXXVCECA--GRGPCTIRASPGREPCLHVEVGDVSKRGGRSXXXXXXXXFSAESVESTSAVRLRTY------SLATTAAGAA-----------------------------------------------------SPRASSADGRESAAATAVS-DALVALHASAVRLG--LPPSVAVPVYAAMLLTGVALLLVAQPLSESRAFHYLLSALLGGVVGAAA 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16879.3849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR73_9PHAE1.780e-3030.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRC3_ECTSI1.860e-3031.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 425..449
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..399
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 400..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16879contigH-paniculata_contig16879:1917..3734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16879.3849.1mRNA_H-paniculata_contig16879.3849.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16879 1917..3734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16879.3849.1 ID=prot_H-paniculata_contig16879.3849.1|Name=mRNA_H-paniculata_contig16879.3849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=449bp
MPFSLLQKEAAEDKTPAAALLATAERLHVEDPTERSASSTSTGADDANAN
AGDEVGIVRRVLATVAAPAVWMLVSVPDWFSDAVFQVKSTDGSDKRGLVL
VHDPPASLEFACNLLAPWISTPLPTTEASSVSSSFMWLRRIARMACRLDS
PFPGRVVSRPCYSSAIPRQQKGQDPAAASSSSWVAFGMQKTLGLLGFGRG
GGGGNSRGNDGSSSAAAAATAKAGGSFPASILGSSYSTSGCWCEPGGEGP
CTIRAPPGRDPCLFIDVARSKRWGHPKKRGAEYVDASSGLHVSTYLVPLP
TGLMDVMGGGGGGATDAADTAPASTSSADKTTSTVAATAGSAATAGSATE
GSKVKKSQSQGEEGSERVGTAVGRMWRAWSAAAVDVLFAGGGSDDGEGGI
FLASVVVPVYLTRLVIGIALLWLARPLSESRVFHHVLGALLGGGVAAVA
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