mRNA_H-paniculata_contig16871.3847.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A6H5JCZ7_9PHAE (Amidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ7_9PHAE) HSP 1 Score: 353 bits (906), Expect = 2.400e-118 Identity = 167/234 (71.37%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L+VG FTTD WFEP +I+RAVHEAA+GLRAAGHEVVPFEPP+SGW IA+LYYGQ+GAEGNMK FVD++QGE+ML +Y LR+++G N +RP L+WVL +LGD RRASI+ +TRN GLS RQY+ LVADT+DLRSKWE+A + A LDAVIFPP+ALPALPHGA+K LT A TYMFVANLLHWPAGVVPVTL+R +E DYD+ +LP+NQRD T+ A++AM+GS GLPVGVQV
Sbjct: 177 LKVGFFTTDHWFEPSAAISRAVHEAAEGLRAAGHEVVPFEPPVSGWQIAKLYYGQMGAEGNMKRFVDSIQGERMLPSYAALRQLAGFPNCLRPALSWVLRNVLGDERRASIVGITRNKGLSVRQYYELVADTYDLRSKWEDAVTDAGLDAVIFPPVALPALPHGAAKDLTLAFTYMFVANLLHWPAGVVPVTLVRPDEQDYDVKRLPVNQRDGTARLAREAMRGSAGLPVGVQV 410
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: D7FZ96_ECTSI (Amidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ96_ECTSI) HSP 1 Score: 355 bits (912), Expect = 5.110e-117 Identity = 167/234 (71.37%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L+VG FTTD WFEPC +I+RAVHEAA+GLRAAGHEVVPFEPP+SGW IA+LYYGQ+GAEGNMK FVD++QGE+ML +Y LR+++G N +RP L+WVL +LGD RRASI+ +TRN GLS RQY+ LVADT+DLRSKWE+A + A LDAVIFPP+ALPALPHGA+K LT A TYMFVANLLHWPAGVVPVTL+R +E DYD+ +LP+NQRD T+ A++ M+GS GLPVGVQV
Sbjct: 349 LKVGFFTTDHWFEPCAAISRAVHEAAEGLRAAGHEVVPFEPPVSGWQIAKLYYGQMGAEGNMKRFVDSIQGERMLPSYAALRQLAGFPNCLRPALSWVLRNVLGDERRASIVGITRNKGLSVRQYYELVADTYDLRSKWEDAVTDAGLDAVIFPPVALPALPHGAAKDLTLAFTYMFVANLLHWPAGVVPVTLVRPDEQDYDVKRLPVNQRDGTARLARETMRGSAGLPVGVQV 582
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A836CNU8_9STRA (Amidase signature domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU8_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.390e-74 Identity = 127/236 (53.81%), Postives = 166/236 (70.34%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPP--MSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQ-LPLNQRDPTSAAAKKAMKGSTGLPVGVQ 699
L++G +DQWF PC +I R + EAA L+ AGHEVV F P SGWD+ R YYGQ+G+EGNM FV ALQGE++L Y L+ MS + N VRP LA +L+ +LG R AS+L+VTR+GGL+ +QY+ LV D + LR+ + +A A LDA++ P A+ ALPHGAS LTP L+YMF+ANLLHWPAGVVPVT +R E Y D LP +QR +A A++AM+GS GLP+ +Q
Sbjct: 260 LRIGVLHSDQWFRPCTAIERGIREAAATLQDAGHEVVQFSVPDEASGWDVCRQYYGQLGSEGNMAGFVAALQGERLLGCYKRLKTMSDMPNIVRPLLARILD-LLGHRRHASLLKVTRSGGLNVKQYWGLVGDHYALRNAYMQAMQDARLDALLLPAAAVAALPHGASTDLTPVLSYMFLANLLHWPAGVVPVTAVREHEQCYHDDAALPSDQRCILAAKARQAMEGSAGLPIDLQ 494
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: W7TYS1_9STRA (Amidase protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYS1_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.150e-47 Identity = 95/237 (40.08%), Postives = 139/237 (58.65%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAG-HEVVPFE--PPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
+++G F +D +FEPC++ RAV EA L + G +E+V GW+ RLYY + AEG ++S++DAL+GE M+ Y +R + +F+RP L L + G+ RR +++ R GL+TR Y+ + + + W +LD + P +ALPA PHG S L + +Y NLLH+PAGV+PVT +R++EA Y I LP QRD + AA AM+GS LPV VQV
Sbjct: 349 IRLGWFLSDDFFEPCRAGKRAVREAKQALESTGKYELVEMRLSTATDGWEAVRLYYNIMTAEGGLRSYIDALEGEAMIPMYRNIRLAACFPDFLRPLLHTALY-LTGEKRRRFLVKNMRRDGLATRTYWQYCEELQNYQEAWTRMMQTQKLDGFLCPSVALPAFPHGWSSHLESSCSYNLFLNLLHYPAGVIPVTQVRADEAVYPISDLPRMQRDSIARAAAIAMQGSEALPVSVQV 584
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A7S3LKN9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKN9_9STRA) HSP 1 Score: 154 bits (388), Expect = 8.420e-43 Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 124 PMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
P++GWDI LY AEGNM+ F++ L+GE + Y L++ + L NF+RP +A + D RR +++ R+GG+S +Y+ +AD LR W + A + A++ P + LPAL G SK LT A +Y +ANLL WP G VPVT IR EE Y +++P NQRD + A+ M S GLP+G+ V
Sbjct: 20 PVNGWDIYNLYVQLGSAEGNMRGFIEGLEGEDLSAMYTSLKQAADLPNFLRPLIAAFI-----DERRGGLVKTVRSGGISVYEYWQRLADLSVLRKSWAKMVEANDYVAILHPSLPLPALFCGTSKDLTAACSYTLLANLLLWPEGTVPVTTIRKEEQCYPFEEIPANQRDEFARNAQMTMAESEGLPMGISV 207
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A4D9D795_9STRA (Amidase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D795_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.780e-40 Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 1
Query: 133 GWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
GW+ RLYY + AEG ++S++DAL+GE M+ Y +R + +F+RP L L + G+ RR +++ R GL+TR Y+ + + + W +LD + P +ALPA PHG S L + +Y NLLH+PAGV+PVT +R++EA Y LP QRD + AA AM+GS LPV VQV
Sbjct: 9 GWEAVRLYYNIMTAEGGLRSYIDALEGEAMIPMYRNIRLAACFPDFLRPLLHTALY-LTGEKRRRFLVKNMRRDGLATRTYWQYCEELQNYQEAWTRMLQTQKLDGFLCPSVALPAFPHGWSSHLESSCSYNLFLNLLHYPAGVIPVTQVRADEAVYPPSDLPRMQRDSIARAAAIAMQGSEALPVSVQV 197
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A7S1AMR6_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AMR6_NOCSC) HSP 1 Score: 149 bits (376), Expect = 4.590e-38 Identity = 91/236 (38.56%), Postives = 130/236 (55.08%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEAD--YDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L+ G F D +FEP + +RAV E D LR AGH VVPF PP + Y+G + A+G++++FV+ L GE + + Y L+ ++ + +R L L + LG R A IL V G + +Y L L+ + +A AA +DA++ P +ALPALPHG SK L+PA +Y NLL PAG VPVT+++ + +D Y D S A+ A S G P+GVQV
Sbjct: 343 LRYGFFKDDGFFEPHPACSRAVTETCDALRRAGHTVVPFVPPNM-IETVLTYFGIMSADGSLRNFVEGLNGETLFRDYRNLKILASMPQLLRRTLV-ALSRRLGQQRVADILNV--GGAKTAYEYQELTHKVAALQIAFLKAMDAANIDAIVCPGLALPALPHGTSKDLSPACSYTLAYNLLKLPAGSVPVTVVKKDVSDQTYHGSAWHYGGTDKLSQRAQTASVNSAGCPIGVQV 574
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A815EGT5_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815EGT5_ADIRI) HSP 1 Score: 150 bits (378), Expect = 8.140e-38 Identity = 91/234 (38.89%), Postives = 133/234 (56.84%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADYDIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L +G +T D WF P + RAV+EAAD LR GH+VVP+ P + + RLY G VGA+G + F+++LQ E Y L + L NF+RP LA++L ++ G+ R A L + G S QYF LV D ++W + +D ++ P ALPA G S L + +Y F+ N+LH PAGVVP+T++R +E Y+ + + D + AK + S GLP+GVQ+
Sbjct: 929 LTIGYYTNDNWFSPAPACIRAVNEAADALRKLGHKVVPYTP-IDIPEAVRLYVGLVGADG-ARHFLESLQNEPPNPFYSLLIFANKLPNFLRPLLAFIL-RLFGEQRSAHTLLAS--GPKSAYQYFDLVIDLRQYINRWLDEMKKNHIDLLLTPVNALPAYRRGQSSTLFSSCSYTFLFNVLHLPAGVVPMTVVRDDEQYYE--DIRHSNNDMMVSIAKDVCRESAGLPIGVQL 1155
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A817YPF0_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A817YPF0_9BILA) HSP 1 Score: 145 bits (367), Expect = 7.720e-37 Identity = 89/235 (37.87%), Postives = 131/235 (55.74%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADY-DIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L +G +T D WF P + RAV+EAA+ LR GH V+P+ P + + R+Y G +GA+G+ + F+++L+ E + Y L + + NF+RP L L ++ G+ R A IL+ G + +YF L+ D KW + +D ++ P LPA HG S L + TY F+ N+LH PAGVVPVTL+R +E Y DI L D + AK + S GLP+GVQ+
Sbjct: 336 LTIGFYTNDNWFSPAPACIRAVNEAAEVLRKLGHRVIPYTP-IDVPEAVRIYVGIIGADGS-RHFLESLENEPINPLYEPLFQAAKFPNFLRP-LVCRLMRLFGEKRNAHILQSV--GSKTAYEYFDLIIDMKKYIKKWLDDLRQNNIDLLLTPVNGLPAYLHGQSSHLFHSCTYTFLFNILHLPAGVVPVTLVRDDEQYYEDIGHL---NNDWVVSMAKDTCRQSAGLPIGVQL 562
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Match: A0A821KJH3_9BILA (Hypothetical protein n=4 Tax=Rotaria socialis TaxID=392032 RepID=A0A821KJH3_9BILA) HSP 1 Score: 143 bits (361), Expect = 5.350e-36 Identity = 86/235 (36.60%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 1 LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARLYYGQVGAEGNMKSFVDALQGEKMLKTYGELRRMSGLLNFVRPPLAWVLEKILGDPRRASILRVTRNGGLSTRQYFTLVADTFDLRSKWEEAFSAAELDAVIFPPMALPALPHGASKALTPALTYMFVANLLHWPAGVVPVTLIRSEEADY-DIDQLPLNQRDPTSAAAKKAMKGSTGLPVGVQV 702
L +G +T D WF + RAV+EAA+ LR GH V+P+ P + + RL+ G +GA+GN + +++L+ E + Y +L + + L NF+RP LA +L +I G+ R A ++ G + +YF L+ D KW + + +D ++ P LPA HG S L + +Y + N+LH+P GVVPVTL+R +E Y DI L D ++ AK + S GLP+GVQ+
Sbjct: 336 LTIGFYTNDTWFPAAPACIRAVNEAAEALRKVGHTVIPYTP-IDVPEALRLFLGIIGADGN-RHLLESLEKEPINSLYKQLFQAAKLPNFLRPLLARLL-RIFGERRNAHVILSV--GSKTAHEYFDLIIDMQKYVQKWLDDLKSNNIDLLLAPVNGLPAYRHGQSGHLFHSCSYTLLFNILHFPVGVVPVTLVRDDEQYYEDIGNL---NNDMVTSLAKDVCRQSAGLPIGVQL 562 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16871.3847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16871.3847.1 >prot_H-paniculata_contig16871.3847.1 ID=prot_H-paniculata_contig16871.3847.1|Name=mRNA_H-paniculata_contig16871.3847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp LQVGCFTTDQWFEPCKSITRAVHEAADGLRAAGHEVVPFEPPMSGWDIARback to top mRNA from alignment at H-paniculata_contig16871:965..5323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16871.3847.1 ID=mRNA_H-paniculata_contig16871.3847.1|Name=mRNA_H-paniculata_contig16871.3847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4359bp|location=Sequence derived from alignment at H-paniculata_contig16871:965..5323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16871:965..5323- >mRNA_H-paniculata_contig16871.3847.1 ID=mRNA_H-paniculata_contig16871.3847.1|Name=mRNA_H-paniculata_contig16871.3847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig16871:965..5323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |