mRNA_H-paniculata_contig16866.3843.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A6H5KVK1_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVK1_9PHAE) HSP 1 Score: 169 bits (429), Expect = 4.390e-46 Identity = 102/209 (48.80%), Postives = 128/209 (61.24%), Query Frame = 2
Query: 140 QAAREFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVLGGE*VFHRKTGGDRHHRGARAFFKRDYIVNGDRPSASEGTR*SLDKCIVSRQDLSDSILTVGCSFQDTVYQSRLKSIHSSVIFDTYLRALR 766
+ AR FF + LQA+L++T L AFL + R RGRPVVC+TAGGTA PLEANTVR+IDNFSTGRR A+SAEQFI RGYGVIYL R+GC+APFARR QELVS H+DL FMD+LVLG R G A A +D IV+ + + D+ + ++ +++D V + L SI S V + YL LR
Sbjct: 10 ETARSFFDGNSKPQTLQAKLKQTGDALEAFLDDQRGRGRPVVCITAGGTAVPLEANTVRTIDNFSTGRRGAISAEQFIARGYGVIYLGREGCSAPFARRFQELVSNHVDLKFMDKLVLGDT---RRVELGTE----AAASMAKDGIVSDSGETVT---------------DVDERLVETLVAYKDAVESNSLLSI-SFVSVEEYLWCLR 195
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A835ZD54_9STRA (DNA/pantothenate metabolism flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD54_9STRA) HSP 1 Score: 127 bits (320), Expect = 6.750e-30 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 2
Query: 218 LGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVL 493
L +F+ E + GRP+VCV+AGGT PLEANTVRSIDNFSTG R ALSAEQF+ GY VIYL R+GCAAP+AR I + +SPH+DL MDRL L
Sbjct: 48 LASFVGEQISVGRPIVCVSAGGTTVPLEANTVRSIDNFSTGMRGALSAEQFLALGYAVIYLHRKGCAAPYARVIADKLSPHVDLQLMDRLRL 139
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A7S2XZH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH3_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.170e-24 Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 2
Query: 110 SMTEDEIEDLQAAREFF-AKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVL-----GGE*VFHR 517
+MTE E++ + A +FF K D E LL F+ GR VVCV++GG+ PLE NTVR +DNFSTG R A+SAE+F++ GY V+YL RQGCAAPFAR IQE V ++DL FM + + GG + HR
Sbjct: 4 TMTE-EVKGAENANDFFRCKPDGIDE-------QINLLEDFVNYQIENGRTVVCVSSGGSTVPLEQNTVRFLDNFSTGMRGAISAERFLELGYAVVYLHRQGCAAPFARVIQEEVGGNLDLKFMANVEVKAMASGGGGLAHR 137
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A485KP62_9STRA (Aste57867_9937 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KP62_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.530e-20 Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 2
Query: 218 LGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVL 493
L F+ + GR VV VT+GGT PLE NTVR IDNFSTG R A SAE FIK GY VI+L R GC PFAR Q+ ++P + L F+D L +
Sbjct: 32 LKEFIDHQTSIGRCVVVVTSGGTTIPLERNTVRFIDNFSTGSRGAASAEYFIKLGYAVIFLHRPGCVMPFARHFQKSMAPDVGLTFLDHLSI 123
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A1V9ZNI2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNI2_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.120e-20 Identity = 56/127 (44.09%), Postives = 73/127 (57.48%), Query Frame = 2
Query: 107 YSMTEDEIEDLQAAREFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRL 487
Y D ++ L A R + S L+ LGAF+ ++ GR V VT+GGT PLE NTVR IDNFSTG R A SAE F+K GY VI+L R GC PFAR Q+ +S ++D F++ +
Sbjct: 40 YCAVVDAMDKLNAQRSRSDEYFGSTTAPEALKEVEESLGAFVEHQKSVGRCVAVVTSGGTTIPLERNTVRFIDNFSTGSRGAASAEYFVKLGYAVIFLHRPGCVMPFARHFQKSMSNNMDWTFLNHV 166
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A7S0DHP1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DHP1_9EUKA) HSP 1 Score: 98.2 bits (243), Expect = 1.180e-19 Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 2
Query: 152 EFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQE-LVSPHIDLNFMDRLVL 493
EFFAK D E ++++ + F+ + ++ GR +VCVT GGT PLE NTVR IDNFSTGRRAA+S E F+++GYGV+YL R+G F+R +Q+ L + + D +F+ L
Sbjct: 40 EFFAKND-PPESYDKIEKE---MEEFVRKNKSSGRRIVCVTGGGTTVPLERNTVRFIDNFSTGRRAAISVEYFLQKGYGVLYLRRRGSVDAFSRHLQDDLKTKNFDSSFLKAFTL 150
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A7S3PI47_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI47_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.250e-19 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 2
Query: 218 LGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVLGGE*VFHRKTGGDRHHRGARAFFKRDY 574
L F + + G +VCVT+GGT P E NTVR +DNFS+G R A E F+++GY V++LSR G A PFAR+ Q+L+SP DL F+ L + + + G ++ + A ++Y
Sbjct: 35 LQKFTQKQESNGVKIVCVTSGGTTVPFEKNTVRFLDNFSSGNRGASCTEHFLRQGYAVVFLSRIGSATPFARKFQKLLSPSYDLKFLQYLKVQDDGHLAIEFGTEKSKEQSAAQILKEY 153
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A1V9Z5M9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5M9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.930e-19 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 2
Query: 191 ARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRL 487
A L+ T+ L +F+ GR V VT+GGT PLE NTVR IDNFSTG R A SAE +K GY VI+L R GC PFAR Q+ +S ++DL F++ +
Sbjct: 24 ASLEETATSLASFVAHQTTIGRCVAVVTSGGTTIPLEKNTVRFIDNFSTGSRGAASAEYLVKLGYAVIFLHRPGCVMPFARHFQKSMSHNMDLAFLNHV 122
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: K3X666_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X666_GLOUD) HSP 1 Score: 97.8 bits (242), Expect = 2.530e-19 Identity = 57/127 (44.88%), Postives = 72/127 (56.69%), Query Frame = 2
Query: 113 MTEDEIEDLQAAREFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVL 493
M ED D A +F K L+ R ++ L AFL R G+ V VT+GGT PLE NTVR +DNFSTG R A S E F++ GY VIYL+R APFAR +Q S H+DL +D + +
Sbjct: 1 MAED---DRARAAAYFHATTAPKSLKQRREQ----LEAFLDHHRVVGKCVAVVTSGGTTVPLEQNTVRFLDNFSTGARGAASTEYFLRLGYAVIYLNRPTTIAPFARHVQRATSSHVDLKLLDYIEV 120
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Match: A0A7S2TF56_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TF56_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 2.560e-19 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 2
Query: 146 AREFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVVCVTAGGTATPLEANTVRSIDNFSTGRRAALSAEQFIKRGYGVIYLSRQGCAAPFARRIQELVSPHIDLNFMDRLVL 493
A E+F AD K+L + + F+ + GR VVCVT GGT PLE NTVR IDNFSTG RAA+S E F+K+GY V+YL R+G +AR +Q+ S ++D F++ L L
Sbjct: 50 ADEYFKSADPPKDLSS----VRAKMDEFVRSNVSAGRKVVCVTGGGTTVPLEKNTVRFIDNFSTGTRAAISVEYFLKKGYCVLYLRRRGSTDAYARHLQKH-SKYLDSRFVEALQL 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16866.3843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16866.3843.1 >prot_H-paniculata_contig16866.3843.1 ID=prot_H-paniculata_contig16866.3843.1|Name=mRNA_H-paniculata_contig16866.3843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp MTEDEIEDLQAAREFFAKADNSKELQARLQRTSGLLGAFLLEMRARGRPVback to top mRNA from alignment at H-paniculata_contig16866:490..4454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16866.3843.1 ID=mRNA_H-paniculata_contig16866.3843.1|Name=mRNA_H-paniculata_contig16866.3843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3965bp|location=Sequence derived from alignment at H-paniculata_contig16866:490..4454- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16866:490..4454- >mRNA_H-paniculata_contig16866.3843.1 ID=mRNA_H-paniculata_contig16866.3843.1|Name=mRNA_H-paniculata_contig16866.3843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig16866:490..4454- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |