prot_H-paniculata_contig16857.3840.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16857.3840.1
Unique Nameprot_H-paniculata_contig16857.3840.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
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BLAST of mRNA_H-paniculata_contig16857.3840.1 vs. uniprot
Match: A0A6H5KYS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 6.910e-19
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 0 
Query:   16 VLPAPYIFDVVDSNFIALDRVSRTAYRLVCLAENSASALDGRSAANILRQSFPGITVILLLDDE 79
            +LP  Y+FDVV +NF AL+RVSR+ YRLVC+A+ S SALDGR  A ++R+SFP +TV+LLLDD+
Sbjct:    1 MLPGSYVFDVVTNNFGALERVSRSKYRLVCVAQESRSALDGRKVATVIRRSFPDLTVVLLLDDD 64
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BLAST of mRNA_H-paniculata_contig16857.3840.1 vs. uniprot
Match: D8LSI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI4_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.830e-18
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 0 
Query:   16 VLPAPYIFDVVDSNFIALDRVSRTAYRLVCLAENSASALDGRSAANILRQSFPGITVILLLDDE 79
            +LP  Y+FDVV +NF AL+RVSR+ YRLVC+A+ S SALDGR  A ++R+SFP +TV+LLLDD+
Sbjct:    1 MLPGSYVFDVVTNNFGALERVSRSKYRLVCVAQESRSALDGRRVAMVIRRSFPDLTVVLLLDDD 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16857.3840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYS1_9PHAE6.910e-1962.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI4_ECTSI1.830e-1862.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16857contigH-paniculata_contig16857:3436..4694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16857.3840.1mRNA_H-paniculata_contig16857.3840.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16857 3436..4694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16857.3840.1 ID=prot_H-paniculata_contig16857.3840.1|Name=mRNA_H-paniculata_contig16857.3840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
RTPQLVAEILQEATDVLPAPYIFDVVDSNFIALDRVSRTAYRLVCLAENS
ASALDGRSAANILRQSFPGITVILLLDDE
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