prot_H-paniculata_contig1683.3830.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1683.3830.1
Unique Nameprot_H-paniculata_contig1683.3830.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length191
Homology
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 6.540e-77
Identity = 135/194 (69.59%), Postives = 156/194 (80.41%), Query Frame = 0
Query:    1 MSRK----TLADHAGLMASEISKNPEDWERRRDALVSMQKAVEDVGQ-----SGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTIISV 185
            MSRK    TL   A  +A E+S NP+DWERRR AL SMQ+AV+D G+     SG     VF  E+WR L+EPLK+TLNDLRSAIVKEAC LLEKLS  +GN M ALMRDML VLLQL+ANGNSVIV QVDSCM+H+I+H+RFPRQLKE+EY V+NSRSKDLRES+GAYVLLML  WP ASMDKEAGHL++II+V
Sbjct:    1 MSRKPATGTLEAAALSLAQEVSGNPDDWERRRKALYSMQQAVDDAGKALSAASGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGHLESIIAV 194          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.280e-74
Identity = 131/195 (67.18%), Postives = 156/195 (80.00%), Query Frame = 0
Query:    1 MSRK----TLADHAGLMASEISKNPEDWERRRDALVSMQKAVEDVGQS-----GTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTIISVI 186
            MSRK    TL   A  +A E+S NP+DWERRR AL SMQ+A +D G++     G     VF  E+WR L+EPLK+TLNDLRSAIVKEAC LLEKLS  +GN M ALMRDML VLLQL+ANGNSVIV QVDSCM+H+I+H+RFPRQLKE+EY V+NSRSKDLRES+GAYVLLML  WP ASMDKEAG+L++II+++
Sbjct:    1 MSRKPAAGTLEAAALSLAQEVSGNPDDWERRRKALYSMQQAADDAGKALSAAGGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGYLESIIALL 195          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A7R9UDW2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDW2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.420e-19
Identity = 59/177 (33.33%), Postives = 98/177 (55.37%), Query Frame = 0
Query:   13 MASEISKNPEDWERRRDALVSMQKA---VEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTIISVI 186
            +A EI  N ++WE+R  A++ + +A    EDV ++    S      LWR LKEPLK  + DLRS +V++AC  LE L+ V+ +    L+RD++T L+Q +ANGN +I    D  ++ ++   R+   ++ +  ++  SRSK  RES    + ++L  WPA  +      LQ   + +
Sbjct:   17 VAQEILSNEDEWEKRDAAVLRLSEAFQGAEDVAEA----SADDLKSLWRVLKEPLKCVVTDLRSELVRDACAALEVLAAVTRDGFRPLLRDLMTHLVQNLANGNKLIARHSDESLQVLLHECRWRGAIQLLSEKLIQSRSKPQRESCAGLLDVILAEWPAKLLTSNPDVLQAAAAAV 189          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A7S1XRA8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.020e-15
Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 0
Query:   13 MASEISKNPEDWERRRDALVSMQKAVEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTW 167
            +A+ I  NPEDWERR +A++ + +    +  +   G+     +LWR LKEP +  L DLRS +V++AC  L  ++  + +    L              GN VI   VD C+  +++H R+   +  +  ++  SR+K  RES   ++ +ML  W
Sbjct:   13 VAATILNNPEDWERRDEAVLQLAEHFSGLRDAELGGTTDEWKQLWRGLKEPFRMLLGDLRSELVRDACSALVAMAAATRDQFRPLXXXXXXXXXXXXXXGNKVIKRHVDECVDELLQHCRYKGAVALVSEKMTTSRAKIQRESCARFLGVMLEHW 167          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A834HZJ5_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834HZJ5_RHYFE)

HSP 1 Score: 82.0 bits (201), Expect = 9.730e-15
Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = 0
Query:    2 SRKTLADHAGLMASEISKNPEDWERRRDALVSMQKAVEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTII 183
            S + + +H   +   IS + +DW +R DAL    K +  +  +G + S  F V L + L  PL+N++ DLRS +V+EAC  +  LS   GN        +L  L+ L+ N   ++    D  +K +IK+   PR +  I      S+SK++R S   ++ ++L+ WP   ++K+   LQ  +
Sbjct:  318 SPRDVTEHLKSIQEVISDSSKDWNKRVDAL----KKIRSLVIAGAMQSDDFYVGL-KNLDIPLQNSIKDLRSQVVREACITIAYLSQNIGNRFDKTAEMLLQSLINLIQNSAKIMATSGDVTVKFLIKNIHNPRLIPIITSNATTSKSKEIRRSCCEFIEIILSHWPTHPLEKQVALLQDCV 494          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A7S3H2K9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2K9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.610e-13
Identity = 47/160 (29.38%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   17 ISKNPEDWERRRDALVSMQKAVEDV-GQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKE 175
            +  + E WE R  A++ +   V     +   + +      ++R LKEP+KN + DLRS  V++ C  L KLS ++G+ M   +RD  + +L+ +   + V    +D C+ H+IK   F   +    + +K+S+SK LRE    YV L+L  W     + +
Sbjct:   19 LKTDAESWEIRNKAILQLTDLVSRFKDEPDEIINEHLTANIFRMLKEPVKNMILDLRSQQVRDTCQFLMKLSDIAGDRMKPFLRDSFSTVLEGVKIPHKVTSGYIDECIVHLIKRVTFKSAIILFMHEIKDSKSKILRERCLEYVNLILMHWDMTEKELD 178          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A8J9RFJ2_9CHLO (Probable CLIP-associating protein 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RFJ2_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 2.010e-11
Identity = 43/162 (26.54%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   22 EDWERRRDALVSMQKAVEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTII 183
            E+W RR DAL+ ++  V    + G  G   F  EL + L+EP+   + D RSA+ ++ACHL+  L+   G  +  +    L  L +++     ++    D+C + +++H + PR L  +   +   RS  LR+    Y++ +L  W +A++D+    ++  +
Sbjct:   85 EEWTRRIDALLRLEGLV----RGGAAGLPGF-AELLKSLQEPIVVQVLDRRSAVSRQACHLISVLAEHMGARLETVAMAFLAALFKVLVITVQIMADSADACARVLLRHCQSPRLLPRLCSTLCKDRSAKLRQFAAEYLIQVLEEWDSAALDRSLAAIEEAV 241          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A8E0RVR0_9TREM (CLIP-associating protein 1 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RVR0_9TREM)

HSP 1 Score: 70.5 bits (171), Expect = 8.800e-11
Identity = 49/181 (27.07%), Postives = 90/181 (49.72%), Query Frame = 0
Query:    2 SRKTLADHAGLMASEISKNPEDWERRRDALVSMQKAVEDVGQSGTVGSLVFN--VELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQ 180
            S K L +  G +   +S NPE+WE+R DAL +++  V +       G+  F   V L + L+ P+   L DLRS++V+EAC  +   S    N        +L  L+ L++N   ++ +  +  ++ ++++T  PR L  I     +S+S   R+ +  ++ ++   WP   ++K    LQ
Sbjct:   61 SPKELTEILGRLKETLSGNPEEWEKRVDALKTLRALVAN-------GAAQFEEFVPLLKNLEVPVDACLRDLRSSVVREACITVAYYSQELKNRFDRFAESVLQTLIVLLSNSAKIMASSANVAIRFILENTHSPR-LFPILVGSLSSKSSVTRKCVCEFMEIIFRVWPLNVLEKHVALLQ 233          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A2A4K157_HELVI (Uncharacterized protein n=16 Tax=Noctuidae TaxID=7100 RepID=A0A2A4K157_HELVI)

HSP 1 Score: 69.7 bits (169), Expect = 1.750e-10
Identity = 42/161 (26.09%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   23 DWERRRDALVSMQKAVEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTII 183
            DWE+R DAL  ++  +     +       F   L ++L  P    + DLRS +V+EAC  +  ++ V  N +      +L  L+ L+ N   V+ +    C+++++ +   PR L  I   +  ++SK++R ++   ++LML  WPA +++K+   ++  I
Sbjct:  362 DWEKRVDALKKIRSLL--TANAHQQYPTEFAAHL-KDLSVPFLVVIKDLRSQVVREACITIAHMAKVLRNKIDQFSLYILQELINLIQNAAKVVSSAGTVCVRYIVSYVHSPRLLPVIVTNLTTNKSKEIRSTLSEVLVLMLEKWPAQTIEKQQAAVRDAI 519          
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Match: A0A7E5W8E6_TRINI (CLIP-associating protein isoform X1 n=7 Tax=Noctuidae TaxID=7100 RepID=A0A7E5W8E6_TRINI)

HSP 1 Score: 69.7 bits (169), Expect = 1.750e-10
Identity = 39/161 (24.22%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   23 DWERRRDALVSMQKAVEDVGQSGTVGSLVFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRDMLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSKDLRESIGAYVLLMLNTWPAASMDKEAGHLQTII 183
            DWE+R DAL  ++  +              ++   ++L  P    + DLRS +V+EAC  +  ++ V  N +      ++  L+ L+ N   V+ +    C+++++ +   PR L  I   +  ++SK++R ++   ++LML  WPA +++K+   ++  I
Sbjct:  363 DWEKRVDALKKIRSLLTANAHQQYPSEFAAHL---KDLSVPFLVVIKDLRSQVVREACITIAHMAKVLRNKIDQFSLYIMQELINLIQNAAKVVSSAGTVCVRYIVSYVHSPRLLPVIVTNLTTNKSKEIRSTLSEVLVLMLEKWPAQTIEKQQASVRDAI 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1683.3830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KBA3_9PHAE6.540e-7769.59CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D8LJI4_ECTSI1.280e-7467.18CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7R9UDW2_9STRA5.420e-1933.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XRA8_9STRA3.020e-1530.32Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A834HZJ5_RHYFE9.730e-1529.67Uncharacterized protein n=1 Tax=Rhynchophorus ferr... [more]
A0A7S3H2K9_9STRA3.610e-1329.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J9RFJ2_9CHLO2.010e-1126.54Probable CLIP-associating protein 2 n=1 Tax=Coccom... [more]
A0A8E0RVR0_9TREM8.800e-1127.07CLIP-associating protein 1 n=1 Tax=Fasciolopsis bu... [more]
A0A2A4K157_HELVI1.750e-1026.09Uncharacterized protein n=16 Tax=Noctuidae TaxID=7... [more]
A0A7E5W8E6_TRINI1.750e-1024.22CLIP-associating protein isoform X1 n=7 Tax=Noctui... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024395CLASP N-terminal domainPFAMPF12348CLASP_Ncoord: 19..181
e-value: 5.2E-14
score: 52.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..187
e-value: 4.9E-31
score: 110.1
NoneNo IPR availablePANTHERPTHR21567:SF67CLIP-ASSOCIATED PROTEINcoord: 6..180
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 6..180
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 21..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1683contigH-paniculata_contig1683:8886..23384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1683.3830.1mRNA_H-paniculata_contig1683.3830.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1683 8740..24987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1683.3830.1 ID=prot_H-paniculata_contig1683.3830.1|Name=mRNA_H-paniculata_contig1683.3830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=191bp
MSRKTLADHAGLMASEISKNPEDWERRRDALVSMQKAVEDVGQSGTVGSL
VFNVELWRELKEPLKNTLNDLRSAIVKEACHLLEKLSTVSGNLMGALMRD
MLTVLLQLMANGNSVIVAQVDSCMKHVIKHTRFPRQLKEIEYRVKNSRSK
DLRESIGAYVLLMLNTWPAASMDKEAGHLQTIISVIFFSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024395CLASP_N_dom
IPR011989ARM-like
IPR016024ARM-type_fold