mRNA_H-paniculata_contig1682.3827.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: D7FMI3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI3_ECTSI) HSP 1 Score: 334 bits (856), Expect = 4.010e-112 Identity = 161/212 (75.94%), Postives = 183/212 (86.32%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRPGTNDPMPGLIGKAYTEMGGTTHYVGKPHSAVYETCFQVLQVSK 636
DQWGVMH+GK Y GAV+CI+RL+++GKKIVLLSNSSKRK AAL++L+R+GFST S+LDVVTSGQIAWDGLQ R EPF SLG+KC+VFG+GD+D EYV+SCGC LAEV +ADFILARGSFVV DS+G RRY+PTVMTGEGK ET KAM M RG PMLVTNPDFLRPGTNDPMPGLIGKAY EMGGT HY+GKPH AVY+ CF L +K
Sbjct: 76 DQWGVMHDGKTPYPGAVDCIDRLSKAGKKIVLLSNSSKRKGAALRNLERMGFSTGSILDVVTSGQIAWDGLQDRVDEPFKSLGAKCLVFGNGDDDLEYVSSCGCTLAEVQDADFILARGSFVVADSNGTRRYTPTVMTGEGKEETHKAMRLMLERGAPMLVTNPDFLRPGTNDPMPGLIGKAYAEMGGTVHYIGKPHPAVYQACFHALATAK 287
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK) HSP 1 Score: 219 bits (558), Expect = 3.550e-67 Identity = 103/209 (49.28%), Postives = 145/209 (69.38%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRPGTNDPMPGLIGKAYTEMGGTTHYVGKPHSAVYETCFQVLQ 627
DQ+GV+HNG AY GA+E + RLA+ GK++V+LSNSSKRK+ +K+L+++GF+ D VTSG ++ + R EPF SLG++CVVFG+ D+D+ Y++ CEL+ ++ ADF+LARG+FV+LD+ + ++ E +A + RG P+LV NPD RPG PMPG+IGK Y +MGGT HY GKPHS+VYE CFQ L+
Sbjct: 78 DQFGVIHNGTHAYQGAIEAVERLAQRGKRLVILSNSSKRKKTGVKNLRKMGFNPDHFCGFVTSGDTVYEEMISRAREPFKSLGTRCVVFGNADDDKAYLSEMQCELSTIEEADFLLARGNFVILDAVETTKCDRSL---ESEARVAAVLAAAAARGLPLLVANPDIARPGCGSPMPGVIGKQYEDMGGTVHYTGKPHSSVYELCFQALE 283
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A835Z8N2_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N2_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.330e-65 Identity = 98/204 (48.04%), Postives = 140/204 (68.63%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRPGTNDPMPGLIGKAYTEMGGTTHYVGKPHSAVYETC 612
D WGV+H+G + Y G ++C+ +L+ GK +V+LSNSS+RK + L L+++GF TD +LDVVTSG +AW+ L EPF SLG C+V G+GD+D +YV + G LA+ + DF+LARGSF + ++ + +++ + E A++T + RG P+LVTNPDFLRPGTNDPMPGLIG+ + GG H+VGKP+ VY C
Sbjct: 22 DAWGVLHDGSKPYPGVLDCLQQLSARGKHVVILSNSSRRKGSVLSGLRKLGFDTDLILDVVTSGDVAWEELHTPTQEPFKSLGRSCLVLGNGDDDVDYVKTAGLTLADAERCDFVLARGSFALTGATSKIQEHASILE---RPEVAAALDTARSRGVPLLVTNPDFLRPGTNDPMPGLIGRDFAAAGGAVHWVGKPYDLVYARC 222
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: W7UB69_9STRA (Sugar phosphatase of the had superfamily n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UB69_9STRA) HSP 1 Score: 192 bits (489), Expect = 3.280e-57 Identity = 102/211 (48.34%), Postives = 137/211 (64.93%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPFASL-GSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGK-----AETRKAMETMQMRGKPMLVTNPDFLRPG-TNDPMPGLIGKAYTEMGGTTHYVGKPHSAVYETC 612
DQWGVMH+G AY GAVEC+ + +GK ++LLSNSSKRK +L L +GF + LDV+TSG++ + GL+ + +A++ G+ +VFGSGDED EYV S GC ++ V+ ADF+LARG F +LDS +P G G+ AE RG PM+V+NPD +RPG NDPMPGL+G+AY + GG YVGKP+ VY+ C
Sbjct: 35 DQWGVMHDGHAAYPGAVECMQSILAAGKYVILLSNSSKRKAGSLARLTDMGFQPEKYLDVITSGELTYLGLKPPRSPSYANIRGTNVLVFGSGDEDREYVESLGCRVSPVEAADFLLARGPFTILDSPDPA--TPPQTFGPGRILHESAEFEAVAAKAIARGLPMIVSNPDIVRPGGDNDPMPGLLGRAYEQKGGQVMYVGKPYPLVYQEC 243
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S0EEY8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEY8_9CRYP) HSP 1 Score: 194 bits (492), Expect = 4.150e-57 Identity = 107/218 (49.08%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNA-EPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRPGTND-PMPGLIGKAYTEM-------GGTTHYVGKPHSAVYETCFQVLQ 627
DQWGVMH+GK AY GAVEC+ +L GKKI+LLSNSS+RK +LK + +GF + S+LD++TSG++ W L +R A PF SLGSK VFG+G+ED+EYV S G E A+V+ ADFILARG F + SS + E R ++ R PM+VTNPDF+RP ND PMPG + Y M YVGKPHS VY+ F+ L+
Sbjct: 79 DQWGVMHDGKTAYGGAVECMKQLQGLGKKIILLSNSSRRKGNSLKKIDGMGFHSTSILDLITSGEVGWQCLSERPAGTPFESLGSKVYVFGNGEEDDEYVKSAGLEFADVEEADFILARGLFTMQGSSDVLHREGPQKYEAWDMEARSCLQIAANRLLPMVVTNPDFVRPDGNDSPMPGKLAAMYESMLMGQLCAARKVIYVGKPHSLVYDQAFERLK 296
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: L1J807_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J807_GUITC) HSP 1 Score: 191 bits (485), Expect = 3.970e-56 Identity = 109/224 (48.66%), Postives = 142/224 (63.39%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNA-EPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFV------VLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRP-GTNDPMPGLIGKAYTEM-------GGTTHYVGKPHSAVYETCFQVLQ 627
DQWGVMH+GK+AY GAVEC+ +L E GKKI LLSNSS+RK +L + +GF + S+LD++TSG++ W L QR A PF SLG+K VFG+G+EDE+YVTS G E A++++ADF+LARG F VL G +Y +A +A +Q+ PM+VTNPDF+RP G + PMPG + Y M YVGKPHS VYE FQ L+
Sbjct: 79 DQWGVMHDGKKAYGGAVECMKQLQEMGKKIFLLSNSSRRKGNSLNKIDGMGFHSASILDLITSGEVGWQCLSQRPAGTPFESLGNKVFVFGNGEEDEQYVTSAGLEFADIEDADFVLARGLFTMHGLSEVLQREGPNKY---------EAWDMEARSCLQL---PMVVTNPDFVRPDGKDSPMPGKLAAMYESMLMAQLCGERKVTYVGKPHSLVYEQAFQRLK 290
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S4P2V8_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P2V8_GUITH) HSP 1 Score: 175 bits (444), Expect = 7.020e-51 Identity = 102/215 (47.44%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 28 KEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNA-EPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFV------VLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRP-GTNDPMPGLIGKAYTEM-------GGTTHYVGKPHSAVYETCFQVLQ 627
K+AY GAVEC+ +L E GKKI LLSNSS+RK +L + +GF + S+LD++TSG++ W L QR A PF SLG+K VFG+G+EDE+YVTS G E A++++ADF+LARG F VL G +Y M E R ++ R PM+VTNPDF+RP G + PMPG + Y M YVGKPHS VYE FQ L+
Sbjct: 4 KKAYGGAVECMKQLQEMGKKIFLLSNSSRRKGNSLNKIDGMGFHSASILDLITSGEVGWQCLSQRPAGTPFESLGNKVFVFGNGEEDEQYVTSAGLEFADIEDADFVLARGLFTMHGLSEVLQREGPNKYEAWDM------EARSCLQIAANRLLPMVVTNPDFVRPDGKDSPMPGKLAAMYESMLMAQLCGERKVTYVGKPHSLVYEQAFQRLK 212
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S1XU23_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU23_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.130e-50 Identity = 95/210 (45.24%), Postives = 134/210 (63.81%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPF-ASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRP-GTNDPMPGLIGKAYTEMGGTTHYVGKPHSAVYETCFQVL 624
DQ+GV+H+GK AY GA + L + GK +V+LSNSS+R+ A K L +GF + D+VTSG+ AW L++R PF ASLGS C VFG+G++D EY+ + G ++A V ADF+ ARG F V D + + Y+ + +A+ + + R PM+V NPDF+RP G PMPG+I Y ++GGT HY+GKPH VYE F++L
Sbjct: 98 DQFGVIHDGKNAYPGAAATVAELLQRGKSVVILSNSSRRRGEAAKKLGAMGF--PEMPDIVTSGEAAWTLLRERPRAPFDASLGSSCAVFGNGEDDLEYMATAGVDIAGVGEADFLFARGLFCVEDGTADKSYT------DERADAM--LVAARERDLPMIVANPDFVRPDGKASPMPGVIAARYEKLGGTVHYIGKPHPMVYEQAFEML 297
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S4CIR6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CIR6_9EUGL) HSP 1 Score: 160 bits (406), Expect = 1.900e-45 Identity = 89/201 (44.28%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDSVLDVVTSGQIAWDGLQQRNAEPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSSGMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRPGTNDPMPGLIGKAYTEMGGTTHYVGKPHSAVY 603
DQWGV+H+GK+ Y GA+EC+ +L GK+IVLLSNSS R+ + L+R+GF + D+VTSG+++W L+++ A + V G G +DEEYVTS GC + AD +LARG F V S G + T G + A+ G PMLV+NPD RPG+ PMPG I Y +GGT H+ GKPH VY
Sbjct: 32 DQWGVLHDGKQPYDGALECMAKLRAHGKRIVLLSNSSVRRTNSYAGLERLGFGPELFDDIVTSGELSWHWLKEQ-ALSRTDRPLRVFVIGRGQDDEEYVTSAGCVFSGPGTADLVLARGMFSVWRSEGDMQAFATAEQLLGAIDP--ALAQCAALGLPMLVSNPDQNRPGSGAPMPGQIASKYQALGGTVHFRGKPHPEVY 229
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Match: A0A7S3WVK0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WVK0_EMIHU) HSP 1 Score: 160 bits (405), Expect = 1.930e-45 Identity = 91/208 (43.75%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 DQWGVMHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGF--------STDSVLDVVTSGQIAWDGLQQRNAEPFASLGSKCVVFGSGDEDEEYVTSCGCELAEVDNADFILARGSFVVLDSS-GMRRYSPTVMTGEGKAETRKAMETMQMRGKPMLVTNPDFLRP-GTNDPMPGLIGKAYTEMGGTT-HYVGKPH 591
DQ+GV+H+GK AY GAV+ + L GKKIV++SNSS+RK L L+ +GF S + VVTSG + W+GL A PFA LG +C VFG+G++DEEYV +CG V ADF+LARG F +L + + R + + + + E +A + G P++V NPD +RP G + PMPGL+ Y MG T VGKPH
Sbjct: 51 DQFGVIHDGKTAYEGAVDAVCELQRRGKKIVIISNSSRRKSDTLARLRSMGFGPCEGDGASDVPPISVVTSGDLVWEGLSAAAAAPFADLGLRCTVFGNGEDDEEYVRTCGRVAVPVAEADFVLARGLFTILGTGPDLLRQPFSPYSADAEEEALRAALAARPGGLPLVVANPDTVRPDGKDSPMPGLLAARYEAMGATDIRPVGKPH 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1682.3827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1682.3827.1 >prot_H-paniculata_contig1682.3827.1 ID=prot_H-paniculata_contig1682.3827.1|Name=mRNA_H-paniculata_contig1682.3827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp MHNGKEAYSGAVECINRLAESGKKIVLLSNSSKRKEAALKSLQRIGFSTDback to top mRNA from alignment at H-paniculata_contig1682:366..3830- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1682.3827.1 ID=mRNA_H-paniculata_contig1682.3827.1|Name=mRNA_H-paniculata_contig1682.3827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3465bp|location=Sequence derived from alignment at H-paniculata_contig1682:366..3830- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1682:366..3830- >mRNA_H-paniculata_contig1682.3827.1 ID=mRNA_H-paniculata_contig1682.3827.1|Name=mRNA_H-paniculata_contig1682.3827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig1682:366..3830- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |