mRNA_H-paniculata_contig168.3824.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: D8LU39_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU39_ECTSI) HSP 1 Score: 1275 bits (3300), Expect = 0.000e+0 Identity = 1039/2543 (40.86%), Postives = 1280/2543 (50.33%), Query Frame = 2
Query: 1313 YSLVSSCCRRAPGLLRLRPLPQDSFNTPSRNPGEVQQAIASAGVNSGSEKESRRENEQRREEGPEGREAAGDVTHIDGTKGVGIGGAHAKCSRVATPTLLVKLFSEKEVANQREAWQAALLVTKKFQGTWRAEKGGETVLPALLTLLRRGGLLSSSGTCYPCLLPFLASLSLENLLSPAAARIATNPDQGPLDPLPPPSSDASSPSKAVPFCVQFLEDLWAPIEALLSSGARGGGGIGGAY------WLVDVAAAHVECVGFLLLKLPSPG-----ATTTSALVQMIVKGPSDEANDYDGATVAASADTKAGPNVVAASAAVTAATASLARAIRSFFLDCGDDAGGSNGEVLIAQDGVGQELKLSRGLRKRLRGAAERS-AVATAFGCTLGQLHLGAERGAGVMGAVEGAVGLGVWDMLIVEGTLALDGRSSDGVCWMREVLVHAIEVINSRRIADSYGRAGSGAVEGGAE--VESGEALARTQNG----GLFGLSGALFRHCAACIE--ASDSGQAEGESAKGRNWQAVSHQDATLISFMASMAEVMGLRMCLMSVSTSASAGEEAENDAR---------RAFYGDFLVPRFAATVAMARGGCRSVRFKEDHDAAAESPMVIGLKELIRLHLV--ESDRKREDFWLLVKTVLKLPSRTRLKATYMALRLVPQDVSGKIPELQEAALEACGLA----EAAR-----------SSSLSPSAS---LPTFLQACLGVWD---ERQAALPFIGASAVAHVADAAVSKLTSTDTMESESDLRASPGLSNPVSSGSPPSRAVALATVAGLLGVISAREIQ-PSRASTPWGNAIHEALDVVKDRKLSLLLASFRRCGSGGTAERLWLDVGAPTLRRLISQQ------------------DFNSDLWEMFTEGAVEYTRLVMEGGSEDGDSNPDNMDDADTLMGGMEGLAEGRAKRAAVLILALTQLEEKLPPAMPKRERMEPEGDAPCPGENEATTVRVPVLWRLGLTQPCMWQRRRREALAHAGIAGTQPTATS---LARCCVSSRWGRRWGCLSLIFSRLPSARARLAFFAKGVPD------GAAVAGEALQEVVTAGVLISAALKLLGHAVENETWTTRPEQDQEGFIYSNSNTLAGRSISPPLPRPTKSSAGPRDGGGGSVHGVVDDTSGNSPLADLGVGFFSCRRFASPDGTAGAVAAGVLDAAMTHLGLGAISNVGVTCNSSPDLALTLVGGGEEKEDGTGVGTVATSLRSRKAYENASAASNHHPFPLLLPTDLWRLSFEQTSAVVTSAEELRLHGLLLSAFRSAAGAMAGEEATKGIGGGEAAAWWLSCASEVASGLVSSVLGHTFWLGLRLGANANRVMTMRCGTFMPAVPSPSQDEIRDGIFPGEKVLYTREGQPVTIVALHGDDVG-ESYYTVRAVSVPG-SIEPAWKEKQTVRERLFVSAPGIDSIGSTSSQV-QCPWYVKPTVSASLADVLRGPLFSLEKRLY----RASRPSSPGGVSGGAEIESPALVAATAACLRSCASTCVRAALLCAPGTEATGGGGGVGADTDIGSDGDGTGGPNGIWSDIGPKVTMLRNRWASASVKSRSSLLTAGGGGPHGGGDKDSARTVCLSSEVLSGFLAGTPLMLSDEAAMELLPGSLQSALVGCAAGTDRGSGSNSRGSLWPPYGWRRAQALSSLLWMRDAAEASCKIHLCPSEASIEGKLFVDTLKSTEAAVIALVDACRENGWGQDAL------DLALARTCAGMFAAEVARVRHGKGVSLSLETKKAVISWAISKFLLSGGRIAAMTHTPSSNSAAGAWRKEDDFALCLEVSRLLTTVAWDGRKGWGSDGSSSVSMAPSRMLVAGPQEASEIWAAAREPRVWRGLHAALVGAVGSPI-QTNAFEVLEAAAAAWDC----GEEASSSEEEAKGGVGGVRTGEGGREVQIREEREESTDGEAVEP----SIVSRLARVLDGWGLASLQRGQKITGDVGAGSGGEDIAASVAVREDKLPSADAAQEEAQEQQDDLELIARCFPEDLLFAVEALPATIESLERQPLSGAVEDSDGCDEENHVDSDDEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEASVSHNDRVAARGEVGKTATIDNDSEXXXXXXXXXXXXXXXFEMGQDLLGSQPQQASGRSRXXXXXXXXSESTSK-----------------------RGPDFNVPGSSRGSGRGRRSSVVLPELITPFLTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIRESQ--GTRSKNSA--AATRLGPAQAVRVSFLDASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQTWA 8554
Y+LVS+CCR APGLLR P P S +P E + A + EK +RR DG GG K SRVATP LL +L SEKE +N REAWQA LLV ++F+ TW AEKG VLP LLT LR+G L++S T YPCLLP LASL + LLSPA R GP PFCV F+E+LW I A SSG G G WL DV +AHVECV FLLLKLP A T+ D + ++ A S V AATA+LA+A+ F L+ A G V R A RS ++ AFG LGQLHLG E+GAGVMG G+ VW L+ E LD RS G WM + LVHA+ +N R+ + G G+ V AE VE+ T G GL + LF HC I + SG + E+ A+S DA L +FM+SMA +G+ + + +A G+ D+R R FY +FLVPRF A+ GG RS +A E+ M L+ L + L+ E R+ DF LL+K L P RL+ T M LRL P ++ PE+ EA L ACG++ E A S L P +S LP FLQACLG D ER AA PF+ AS V+ VA + S T A+ P + +A + GLLGV+ E P+ +S +AL V+ LSLLLA+F G G A+RLW DV APTL+ L+ + + +W+ F AVE R MEG + D D L G G +RAA L AL L L + + + P DAP VLWRLGLT+P +W++RR EALA + P AT+ LAR CV SRW RRW C+SL+ RLP ARARL+ +GV G VAGEAL E++ AGV++S A++LLG +EG G V + S + P SC A + T ++S +A GG + ED GVG R+ + A P + A V SAE L L A A+AG G A+W +C++ V+SGLV +V+G F GL LG ANR+M +RCGT+ VPS + + PG K LYT +GQ VTIVA H D G E YYTVR + PG + + A +E+QTV RL V+ P S G+ ++ W V+P V+A L +VL GP+ ++E+RL+ R+ S P E+PAL +ATAA LR ASTCVRAALLC T GGG A W + P + LRNRWA+A TV L++ VLSGFLA TPLM SDE M L+P ++ +L G AAG GS GWRR Q +SL W+RD AEASCK+H+ S S+ +FV T TEAAV+ALV + G +++ DLALAR CAG+FAAE R+ G SLS ++K AV+SWA+SKFLLSGGR+A+ T ALCLE +RLLT AWDG L+A + +++W AAR P VWRGLHAA+VGAV SP+ Q AFEVLEAAAA W G+E S E AKG G G EE + A P SIVSRLAR L GWGLAS Q G QQDDLELIA+CFPEDLL AVEALP+TI++L P + A S EEN + XXXXXXXXXXXXXXXXXXXXXDE ++ A +V +D+ XXXXXXXXXXX + + S+P+Q G + + SK RG N+PG R RR+ P L PFLTWLLWLEHCRRASE+E +SRSAAR FVARAGAL PV+EAC RV+R SQ G RS + + A+RLGPAQAVRVS LD KP DLARLALAVYFRTV+VFPAL+RSWW DDC+RGLR+W A+FT++HVSPALIQIEA II AT +G+WDDGG M+VRASA SRQ VVASY+KEECTLEA IQLPP+YPLRNVEV+C++RMGVSE+RWR WVLQIVTLLSLQDGSVLDAVM+WKKNVDKEFEG++PCVICY +LHP+ M LPQM+CKTC NRFHS CLYKWF TSHK+KCPICQQTWA
Sbjct: 2 YALVSACCRHAPGLLRPHP-PLPPAKASSGDPAEEGKTEAVSDTGGKKEKANRR----------------------DG------GGIAGKRSRVATPGLLAELLSEKEDSNHREAWQAVLLVLREFKETWMAEKGAAAVLPTLLTRLRKGAFLATSSTSYPCLLPLLASLPAQALLSPADGRA------GP------------------PFCVAFVENLWVTI-AKPSSGDAAGDRTGXXXXXXXXXWLADVVSAHVECVTFLLLKLPPAPQGLGEAGDTAXXXXXXXXXXXXXXVDTERSSAAVS---------------VAAATANLAKAVGVFVLEEETGATGPGNGV---------------------RTAGRRSQTISEAFGRVLGQLHLGGEKGAGVMGTTSGSAA--VWGALLREFEGGLDQRSRGGAAWMGKTLVHAMTAVNERKSGGARGSPGAATV---AEETVENPTQPPTTAKGSHCTGLREMCRTLFHHCVGAIGYVSPSSGVTDDEAGA-----AISSVDAPLTAFMSSMAGALGMDG-IFCMGDAALPGDGGGGDSRPSVVAPDSAREFYENFLVPRFVASA----GGRRST------EAMGEAAM--ALESLTKAFLLAEEGPRQWNDFRLLLKRALAEPEVVRLRTTTMVLRLAPASMARVFPEVDEALLRACGISFPGTEPAAXXXXXXXXXXXSPRLHPKSSTQDLPAFLQACLGATDGGRERTAA-PFVKASTVSEVAKVVTAASPSASTXXXXXXXEAAGVAIRPT--------LLPMAVLEGLLGVLGTGESGGPADSSRRGVGNDDDALAAVRKSGLSLLLAAFSAIGEGRAADRLWRDVAAPTLQDLVLRAPRREAXXXXXXXXXXPPPQWCDGIWQDFVGEAVEEARRAMEGNGVNDDGASDQGAPPLLLPG------RGGVERAATLTSALLDLRSAL---LRRGATLLPPDDAP-------------VLWRLGLTRPSVWRQRRLEALAAGERSTGGPLATAAADLARACVGSRWSRRWECVSLVLGRLPDARARLSLLVEGVVSAEAEGGGVGVAGEALHEILAAGVMVSRAVRLLG--------------GEEG------------------------------------RGGVSEVSVDLP---------SCLLVAPAEDT---------------------------ISASGRMARAAAGGVDSVED-FGVGL-------RRFRGVSMGADGDDP---------------EAVAAVASAEVLDAALAHLDAA-----ALAGXXXXXXEAG--TASWRTACSATVSSGLVVAVVGEAFARGLGLGDEANRLMAVRCGTYKAPVPSAAD------LVPGAKTLYTSDGQAVTIVAAHVDPGGGEGYYTVRPIPAPGGTADDAGRERQTVLGRLSVTPPSPRSSGAVAAPPPHARWLVRPAVAAKLGEVLAGPVSAIERRLWEHLGRSPEMSGP---------EAPALSSATAAALRGVASTCVRAALLCGSNPRGTAGGGSQEA-----------------WEGVRPGILTLRNRWAAAXXXXXXXXXXXXXXXXXXXXXXX-XXTVALAASVLSGFLAATPLMPSDEEGMRLMPARIRGSLCGEAAG--------GAGSAAAALGWRRVQGTASLAWLRDCAEASCKVHVSASLGSLGSDIFVGTQAETEAAVVALVRSAVRRRRGDNSVVGGGSFDLALARACAGLFAAESCRLSQGHAASLSCDSKAAVVSWAVSKFLLSGGRMASATAXXXXXXXXXXXXXXXXXALCLETARLLTATAWDG-------------------LLAARGDRAKVWEAARFPAVWRGLHAAVVGAVASPVLQLCAFEVLEAAAADWRSDPVSGDEGS---EGAKGDDAGTPAG---------EEEGKGDGSSATAPGEGQSIVSRLARALGGWGLASAQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQASARARSGTRREENIM--------------------AXXXXXXXXXXXXXXXXXXXXXDEKQAWGSEEGA---DVDSAERPTSDASAXXXXXXXXXXXSERGDAEEHSADSEPEQGGGTADGTDGDIAPQSTASKSRXXXXXXXXXXXXXXXXXXTSDRGQAGNIPGGGRDR---RRTPASGPSLTGPFLTWLLWLEHCRRASELEAKSRSAARVFVARAGALSPVMEACFRVLRASQDDGGRSNSGSIGGASRLGPAQAVRVSRLDPRKPHDLARLALAVYFRTVHVFPALSRSWWSDDCARGLRVWVADFTKRHVSPALIQIEAQIITRATDKGVWDDGGEMSVRASANSRQ--VVASYLKEECTLEAVIQLPPDYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKSMDLPQMTCKTCNNRFHSSCLYKWFHTSHKNKCPICQQTWA 2184
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A6H5KS32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS32_9PHAE) HSP 1 Score: 949 bits (2453), Expect = 2.960e-297 Identity = 820/2187 (37.49%), Postives = 1073/2187 (49.06%), Query Frame = 2
Query: 1586 SRVATPTLLVKLFSEKEVANQREAWQAALLVTKKFQGTWRAEKGGETVLPALLTLLRRGGLLSSSGTCYPCLLPFLASLSLENLLSPAAARIATNPDQGPLDPLPPPSSDASSPSKAVPFCVQFLEDLWAPIEALLS---SGARGGGGIGGAYWLVDVAAAHVECVGFLLLKLPSPGATTTSALVQMIVKGPSDEANDYDGATVAASADTKAGPNVVAASAAVTAATASLARAIRSFFLDCGDDAGGSNGEVLIAQDGVGQELKLSRGLRKRLRGAAERS-AVATAFGCTLGQLHLGAERGAGVMGAVEGAVGLGVWDMLIVEGTLALDGRSSDGVCWMREVLVHAIEVINSRRIADSYGRAGSGAVEGGAEVESGEALA--RTQNG-GLFGLSGALFRHCAACIE--ASDSGQAEGESAKGRNWQAVSHQDATLISFMASMAEVMGLR--MCLMSVSTSASAGEEAEN------DARRAFYGDFLVPRFAATVAMARGGCRSVRFKEDHDAAAESPMVIGLKELIRLHLVESD--RKREDFWLLVKTVLKLPSRTRLKATYMALRLVPQDVSGKIPELQEAALEACGL-------AEAARSSS----LSPSAS---LPTFLQACLGVWD---ERQAALPFIGASAVAHVADAAVSKLTSTDTMESESDLRASPGLSNPVSSGSPPSRAVALATVAGLLGVISAREIQ-PSRASTPWGNAIHEALDVVKDRKLSLLLASFRRCGSGGTAERLWLDVGAPTLRRLISQ-------------------QDFNSDLWEMFTEGAVEYTRLVMEGGSEDGDSNPDNMDDADTLMGGMEGLAEGRAKRAAVLILALTQLEEKLPPAMPKRERMEPEGDAPCPGENEATTVRVPVLWRLGLTQPCMWQRRRREALAHAGIAGTQPTATS---LARCCVSSRWGRRWGCLSLIFSRLPSARARLAFFAKGVPDGAA------VAGEALQEVVTAGVLISAALKLLGHAVENETWTTRPEQDQEGFIYSNSNTLAGRSISPPLPRPTKSSAGPRDGGGGSVHGVVDDTSGNSPLADLGVGFFSCRRFA------SPDGTAGAVAAGVLDAAMTHLGLGAISNVGVTCNSSPDLALTLVGGGEEKEDGTGVGTVATSLRSRKAYENASAASNHHPFPLLLPTDLWRLSFEQTSAVVTSAEELRLHGLLLSAFRSAAGAMAGEEATKGIGGGE-----AAAWWLSCASEVASGLVSSVLGHTFWLGLRLGANANRVMTMRCGTFMPAVPSPSQDEIRDGIFPGEKVLYTREGQPVTIVALHGDDV-----GESYYTVRAV-SVPGSIEPAWKEKQTVRERLFVSAPGIDSIGSTSSQVQCPWYVKPTVSASLADVLRGPLFSLEKRLY----RASRPSSPGGVSGGAEIESPALVAATAACLRSCASTCVRAALLCAPGTEATGGGGGVGADTDIGSDGDGTGGPNGIWSDIGPKVTMLRNRWASASVKSRSSLLTAGGGGPHGGGDKDSARTVCLSSEVLSGFLAGTPLMLSDEAAMELLPGSLQSALVGCAAGTDRGSGSNSRGSLWPPYGWRRAQALSSLLWMRDAAEASCKIHLCPSEASIEGKLFVDTLKSTEAAVIALV-DACRENGW-----GQDALDLALARTCAGMFAAEVARVRHGKGVSLSLETKKAVISWAISKFLLSGGRIAAMTHTPSSNSAAG-AWRKEDDFALCLEVSRLLTTVAWDGRKGWGSDGSSSVSMAPSRMLVAGPQEASEIWAAAREPRVWRGLHAALVGAVGSPI-QTNAFEVLEAAAAAWDCGEEASSSEEEAKGGVGGVRTGEGGREVQIREEREEST-DGEAVEPSIVSRLARVLDGWGLASLQRGQKITGDVGAGSGGEDIAASVAVREDKLPSADAAQEEAQEQQDDLELIARCFPEDLLFAVEALPATIESLERQPLSGAVEDSDGCDEENHVDSDDEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEASVSHNDRVAARGEVG---KTATIDNDSEXXXXXXXXXXXXXXXFEMGQDLLGSQPQQASGRSRXXXXXXXXSEST-----SKRGPDFNVPGSSRGSGRGRRSSVVLPELITPFLTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIRESQGTRSKNS 7837
SRVATP LLV+L SE+E +N REAWQA LLV +F+ TW AEKG VL LLT LR+G L++SGT YPCLLP LASL + LLSPA R GP PFCV +E+LW I S +G R GGG GG WL DV +AHVECV FLLLKLP + L + + + D G V DT+ +A+ +V AATA+LA+A+ F L+ ++ G + GL LR RS ++ AFG LGQLHLG E+GAGV+G G+ VW L+ E LD R G W+ + LV A+ IN R+ ++G G+ V + LA R +G GL L LF HC I + SG + ++ A+S DA L +FM++MA +G+ C+ + S +G D+ R FY +FLVPRF A+ GG RS+ +A E+ M L+ L + L+ D R+ +DF LL+K L P L+ T M LRL P ++ PE+ EA L ACG+ A A SSS L P +S L FLQACLG D ER AA PF+ A V+ V A + S T S A+ P +++A + GLLGV+ E P+ +S +AL V+ LSLLL +F G G A+RLW DV APTL+ L+ + + +W+ F GAVE R MEG D D L G G +RAA L AL L L + + + P DAP +LWRLGLT+P +W++RR EALA + P AT+ LAR CV SRW RRW C+SL+ +RLP A+ARL+ +GV A VAGEAL E+ AGV++S A++LL + E+ + G + + + + ++P + + S G+ +G + D GVG R + P+ A +A VLDAA+ HLG S G E + DG GV ++ PF LLLP LWR++FE + T ++ RLH +LLSA S A+A ++A AAAW +C++ V+SGLV +V+G GL LG NR+M +RCGT+ VPS + + PG K LYT +GQ VTIVA H D GE YYTVR + G+ + A +E+QTV RL V+ P ++ Q W V+P V+A L +VL GP+F++E+RL+ R+ S P E+PAL +ATAA LR ASTCVRAALLC T GGG A W + P + LRNRWA+A+ K + +A TV L++ VLSGFLA TPLM S+E M L+P ++ AL AAG GS GWRRAQ +SL W+RD A+ASCK+H+ PS S+ +FV T TE AV+ALV A R G G + DLALAR CAG+FAAE R+ G SLS ++K AV+SWA+SKFLLSGGR+A+ T + A +DD ALCLE +RLLT AWDGR L+A + +++W AAR P VWRGLHAA+VGAV SP+ Q AFEVLEAAAA W G+ S EE G G G G E + +++ +T GE SIVSRL R L GWGLAS Q G G V G ++ + P +A +EEA+EQQDDLELIA+CFPEDLL AVEALP+TI++L P + A ++ ++E E AS D + E G + + D+++E + PQ + +SRXXXXXXXX S RG N+PG R RR+ P L PFLTWLLWLEHCRRASE+E +SRSAARAFVARAGAL PV+EAC V+R SQ NS
Sbjct: 64 SRVATPGLLVELLSEEEDSNHREAWQAVLLVLGEFKETWMAEKGAAAVLTTLLTRLRKGAFLATSGTSYPCLLPLLASLPADALLSPADGRA------GP------------------PFCVALVENLWVTIAKSSSRDAAGDRTGGGGGG--WLADVVSAHVECVTFLLLKLPP----ASQGLGEAGDTAAASTSGDIPG--VGRGVDTERS----SATLSVAAATANLAKAVGVFVLE--EETGAT-------------------GLGNGLRTVGRRSQTISEAFGRALGQLHLGGEKGAGVVGTTSGSAA--VWGALLREFEEGLDQRG--GAAWIGKTLVRAMTAINERKSRGAWGSPGAATVAEETVQSPSQPLATDRGPHGTGLRELCRTLFHHCVGAIGYVSPSSGVTDDDAGA-----AISSVDAPLTTFMSNMAGALGMGGIFCMGDAALSDDSGNGDSKPSVVPPDSAREFYENFLVPRFVASA----GGRRSM------EATGEATM--ALESLTKAFLLAEDGPRQSDDFRLLLKRALAEPEAVWLRTTTMVLRLAPASMARVFPEVDEALLRACGISLPGTEPAAAPPSSSSSERLRPKSSTQDLTAFLQACLGATDGGRERTAA-PFVKAVTVSEVVKVATAASLSASTFNSAGTAEAADAAIRPT--------LLSMAVLEGLLGVLGTGESGGPADSSRGGVGNDDDALAAVRKSGLSLLLGAFSAIGEGRAADRLWRDVAAPTLQDLVLRGPRRAXXXXXXXXXXXXXXPQWCDGIWQEFLGGAVEEARRAMEGDGVHDDGASDQGAPPLLLAG------RGGVERAATLTSALLDLRSAL---LRRGATLLPPDDAP-------------MLWRLGLTRPSVWRQRRLEALAAEARSTGAPLATTAADLARACVGSRWARRWECVSLVLARLPDAKARLSLLVEGVVSAEAEGGSVGVAGEALHEIFAAGVMVSRAVRLL-----------KGEEGRGGVLEVSVDLPSCLLVAPAEDKISASG------------GMARAAAGVDSVEDFGVGLQRFRGGSMAADGDDPEAVAAVASAEVLDAALAHLG-----------EQSQ-------GAFEAEADGYGV-------------------ASQQPFSLLLPQGLWRVAFESAA---TDTKDERLHAVLLSALSSCL-ALAAQDAXXXXXXXXXXXXVAAAWRTACSATVSSGLVVAVVGEALARGLGLGDEVNRLMAVRCGTYKAPVPSAAD------LVPGAKTLYTSDGQAVTIVAAHVDPGYRKGGGEGYYTVRPIPEADGAADDAGRERQTVLGRLSVTHPSPRTLVDAPPQ-HARWLVRPAVAAKLGEVLAGPVFAIERRLWEHIGRSPELSGP---------EAPALSSATAAALRGVASTCVRAALLCGSDPRGTAGGGSQEA-----------------WERVRPGILTLRNRWAAAAAKXXXXXXXXXXXXXXXXXXQ-AAATVALAASVLSGFLAATPLMPSEEEGMRLMPARIRGALCEEAAG--------GAGSAAAALGWRRAQGTASLAWLRDCADASCKVHVSPSPGSLGSDIFVATHAETEVAVVALVRSAGRRRGGDNSVVGGGSFDLALARACAGLFAAESCRLSQGHAASLSCDSKAAVVSWAVSKFLLSGGRMASGTAAEGGDLAGSFGGGDDDDAALCLETARLLTATAWDGR------------------LLAARGDRAKVWEAARSPAVWRGLHAAVVGAVASPVLQLCAFEVLEAAAADWR-GDPVSGDEEPE--GAKGDDAGTPGEEEESKDDGSSATAPGEG--QSIVSRLGRALGGWGLASAQAGGGAEGGVVDVEGSDERGDADEGAGSSSPGTEAVEEEAKEQQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQASARARGGARRQDIMAAHEEEEEGDYDDSEAEEEDVEDEKHAWDSEEVADVDSAERSTCVASPGEEDEIEGGSESGGAEEPHSADSEAEGGGTTDKADGD-------------NAPQSTASKSRXXXXXXXXXXXXXXXXXSDRGQAGNIPGGGRDR---RRTPASGPSLTGPFLTWLLWLEHCRRASELEVKSRSAARAFVARAGALTPVMEACFGVLRASQVGAINNS 1996
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A7S4DAB1_HETAK (E3 ubiquitin-protein ligase listerin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAB1_HETAK) HSP 1 Score: 280 bits (716), Expect = 3.710e-80 Identity = 140/294 (47.62%), Postives = 192/294 (65.31%), Query Frame = 2
Query: 7670 LTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIRESQGTRSKNSAAATRLGPAQAVRVSFLD--ASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
L LL ++ + + ++ A ++V+ + ++E C ++E Q + K + A+ VS +D A D+ + V+++TV FPAL R WW DC RGL + FT++HV P ++Q E D I +A A G W D MTVR S SR+ V A+Y+K+EC+LE I++P YPL NVEV+CTRR+GV+E RWR WVLQIVTLL QDGSVLDAV+LWK+NVD+EFEG+ PC IC+ IL+P+D +LP + CKTC+N+FHS CLYKWF TS K+KCP+CQQ
Sbjct: 79 LACLLLMDFVASVDDSDDLAKGALSSYVSHIRLIPMIVEICFVNMQEKQLNKFK-------VPNLSAMVVSEMDLAAEDSKDMMPFCMKVFYQTVEAFPALVRHWWSHDCRRGLNGRVSRFTEEHVGPMIMQREIDKIREAEANGKWGDTSEMTVRGSKVSRE--VTATYMKDECSLEVVIKVPASYPLANVEVNCTRRLGVAEGRWRRWVLQIVTLLGTQDGSVLDAVLLWKQNVDREFEGVDPCPICFSILYPKDHALPTLPCKTCQNKFHSACLYKWFHTSRKNKCPLCQQ 363
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A2P4YRS2_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRS2_9STRA) HSP 1 Score: 259 bits (662), Expect = 9.240e-71 Identity = 116/215 (53.95%), Postives = 157/215 (73.02%), Query Frame = 2
Query: 7916 RLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADA-----TARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
+L V+FRTV PA+ RSWW DDCSR R WAA++ + H++P+++ E D+I A T WDD MTV+ S SR+ + +Y+K+EC LE +++P YPLR VEV CT+R+G+SE+RWR WVLQI+ + S +DGS+LDAV+LWK+NVDKEFEG++PC ICY IL+P++M LP + CKTC N++H+ CLYKWF S K+KCPICQQ
Sbjct: 329 QLGTCVFFRTVVRLPAMVRSWWNDDCSRAARSWAAKYFEDHITPSVLAAELDLIQKAGENTLTGGESWDDEE-MTVKGSRVSRE--ITTTYMKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKRNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCNNKYHNSCLYKWFNQSGKNKCPICQQ 540
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A835ZJN0_9STRA (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJN0_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.600e-70 Identity = 113/174 (64.94%), Postives = 137/174 (78.74%), Query Frame = 2
Query: 8033 KHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQTWA 8554
+HV+PA+I E ++ A A G WD G + VRAS VVA+YVK+E L I+LPP YPLR VEVSC R++G+ E RWR WVLQIVTLLS++DGSVLDAV+LWK+NVDKEFEG++PCVICY LHPRDM+LP ++C+TC NRFH CLYKWF+TSHKSKCP+CQQTWA
Sbjct: 1 RHVTPAIIAREIAHLSSARAGGRWDSEG-LAVRAS--EAVGEVVATYVKDESELSMTIRLPPSYPLRAVEVSCARQLGIGEARWRRWVLQIVTLLSVRDGSVLDAVLLWKRNVDKEFEGMEPCVICYSTLHPRDMALPTLACRTCSNRFHPSCLYKWFQTSHKSKCPLCQQTWA 171
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A485KRY7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRY7_9STRA) HSP 1 Score: 270 bits (690), Expect = 7.700e-69 Identity = 144/313 (46.01%), Postives = 193/313 (61.66%), Query Frame = 2
Query: 7631 RSSVVLPELIT--PFLTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIRESQGTRSKNSAAATRLGPAQAVRVSF--LDASKPLDLAR----LALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
RS++ P T P L W L+L S SA AFV + LGP L C + Q ++++T L A AV +F L LD+A LA AV++RTV P + R WW DDC+R R W A+F +++VSP L+ E I +WD MTVR S SR+ + +Y+K+ECTLE I++PP YPLR+VEV CT+R+G+SE RWR WVLQI+ + + QDGS+LDAV+LWK NVDKEF+G++PC IC+ IL+P+ M LP + C+TC N++H+ CLYKWF S K+KCPICQQ
Sbjct: 1334 RSAMATPATTTLAPLLVWDLFLRMF--PSTTSPLVTSALGAFVTQHHLLGPFLTLCGHHL---QAATKATASSSTTLPTAAAVDAAFPTLSTLAALDVASAVAPLAAAVFYRTVVKLPTMVRLWWNDDCTRSTRSWVAKFCEENVSPLLLVEEIRAIQVGGETALWD-ADEMTVRGSKVSRE--ITTTYLKDECTLEMVIRVPPSYPLRSVEVECTKRIGISEERWRRWVLQILKVTASQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLQCRTCSNKYHNSCLYKWFNQSSKNKCPICQQ 1638
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A7S2AAA4_TRICV (E3 ubiquitin-protein ligase listerin n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAA4_TRICV) HSP 1 Score: 246 bits (629), Expect = 4.970e-68 Identity = 129/302 (42.72%), Postives = 185/302 (61.26%), Query Frame = 2
Query: 7655 LITPFLTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIR--ESQGTRSKNSAAATRLGPAQAVRVSFLDASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQTWA 8554
L+ LTWL+ L+ A+ V+ R+RS+ ++ R GAL L A R + Q T + A + A++ + L L+ V+FRT+ P LT+SWW DDC R L+ EF Q V+P +++ E I A D GM V S SR+ VVA+Y ++EC L I++PP +PLRNVEV C + +GV+E R+R W LQI+ +L+ QDGS+LDA++LWK+NVDKEFEG++PC +CY +L + S+P + CKTC+NRFHS CL+KWF++S KS+C +CQQ W+
Sbjct: 120 LLGKILTWLICLDFIDGAAAVDIRNRSSISSYFERTGALNEALAATIHQARLFDKQDTEWMSCTGAEK-------------ANRTILLPILSTLVFFRTIESLPTLTKSWWTDDCPRPLQNPVTEFVQSSVAPEIMKREMARIKMA------QDLSGMEVTGSVISRE--VVATYAQDECQLSVMIRVPPVFPLRNVEVDCQKTLGVAEKRYRRWALQIMRMLNTQDGSILDALLLWKQNVDKEFEGVEPCPVCYSVLCVKTHSMPNLECKTCQNRFHSSCLFKWFQSSGKSQCVLCQQPWS 400
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A8K1C458_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C458_PYTOL) HSP 1 Score: 267 bits (682), Expect = 8.760e-68 Identity = 143/327 (43.73%), Postives = 204/327 (62.39%), Query Frame = 2
Query: 7583 PDFNVPGSSRGSGRGRRSSVVLPELITPFLTWLLWLE--HCRRASEVERRSRSAARAFVARAGALGPVLEACCRVI-RESQGTR--SKNSAAATRLGPAQAVRVS-FLDASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
P+ P RG R L E++ L W L+L+ + V S SA ++ G L L +I +E+ GT S + A ++ Q + S +L+ +P + +A +FRTV PA+ R+WW D+C RGLR WA+++ ++H++P ++ E II A++ WD MTV+ S SR+ + +Y+K+EC LE I++P YPLR+VEV CTRR+G+SE+RWR WVLQI+ + S QDGS+LDAV+LWK+NVDKEFEG++PC ICY IL+P+ M LP +SCKTC N++H+ CLYKWF S K+KCPICQQ
Sbjct: 1478 PESKTP---RGKRTRRHDHPELEEIMNSLLLWDLFLQLFPVTGGNSVAMLS-SALGSYATHFGLLSKYLTLTGTLISQETSGTSKLSLSDGALFQVEDLQGEKASAWLNLLEPSFVTSIAARSFFRTVIRLPAMVRAWWNDECGRGLRSWASKYFEEHITPYVLASELAIIQKASSLNSWDVDE-MTVKGSKVSRE--ITTTYMKDECALEMVIRVPSSYPLRSVEVECTRRIGISEDRWRRWVLQIIKVTSAQDGSLLDAVLLWKQNVDKEFEGVEPCPICYSILNPKTMGLPNLSCKTCSNKYHNSCLYKWFNQSGKNKCPICQQ 1797
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A1V9ZGZ7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGZ7_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.140e-67 Identity = 122/219 (55.71%), Postives = 159/219 (72.60%), Query Frame = 2
Query: 7889 DASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
D S P LA LA A+++RTV P + R WW D+CSR R W A+F +++VSP L+Q E I A + +WD M VR S SR+ VV SY+K+EC+LE +++P YPLR+VEV CT+R+G+SE RWR WVLQI+ + S QDGS+LDAV+LWK NVD+EF+G+ PC ICY IL+P+ M LP +SCKTCKN++H+ CLYKWF S K+KCPICQQ
Sbjct: 1452 DHSAPGLLAPLAGALFYRTVVKLPTMVRLWWNDECSRSARSWVAKFCEENVSPLLLQEEIAAIHAAAEKDLWDPEE-MNVRGSKVSRE--VVTSYIKDECSLEMVVRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKSNVDREFDGVDPCPICYSILNPKTMGLPNLSCKTCKNKYHNSCLYKWFNQSSKNKCPICQQ 1667
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Match: A0A5D6XW30_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW30_9STRA) HSP 1 Score: 265 bits (677), Expect = 3.690e-67 Identity = 135/315 (42.86%), Postives = 198/315 (62.86%), Query Frame = 2
Query: 7622 RGRRSSVVLPELITPFLTWLLWLEHCRRASEVERRSRSAARAFVARAGALGPVLEACCRVIRESQGTRSKNSAAATRLGPAQAVRVSFLD-------ASKPLDLARLALAVYFRTVYVFPALTRSWWVDDCSRGLRIWAAEFTQKHVSPALIQIEADIIADATARGIWDDGGGMTVRASATSRQASVVASYVKEECTLEACIQLPPEYPLRNVEVSCTRRMGVSENRWRLWVLQIVTLLSLQDGSVLDAVMLWKKNVDKEFEGIQPCVICYGILHPRDMSLPQMSCKTCKNRFHSKCLYKWFRTSHKSKCPICQQ 8545
R ++ + ++I L W L+L+ A+ SA ++ + G L L C ++ + +GT S+ S+ L A RV+ L A+ + + V+FRTV PA+ R+WW D+CSR LR WA ++ + H++P ++ E ++I A+ R WD M+V+ S SR+ + +YVK+EC LE I++P YPLR+VEV CT+R+G+SE+RWR WVLQI+ + + QDGS+LDAV+LWK+NVDKEFEG++PC ICY IL+P+ M LP + CKTC N++H+ CLYKWF S K+KCPICQQ
Sbjct: 1559 RRKQKAQEREDIIGRLLLWDLFLQLFPTATNAPTMVASALSSYAQQHGLLSNFLTFCSTLLSQ-EGTLSRASSKLV-LQDAPLFRVADLAHGLEGAWANDKASVFHVGARVFFRTVLRLPAMVRTWWNDECSRSLRSWAGKYFEDHITPFILASELEVIQAASQRQSWD-ADEMSVKGSRVSRE--ITTTYVKDECALEMVIRVPASYPLRSVEVECTKRIGISEDRWRRWVLQIIKVTASQDGSLLDAVLLWKQNVDKEFEGVEPCPICYSILNPKTMGLPTLPCKTCANKYHNSCLYKWFNQSGKNKCPICQQ 1868 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig168.3824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig168.3824.1 >prot_H-paniculata_contig168.3824.1 ID=prot_H-paniculata_contig168.3824.1|Name=mRNA_H-paniculata_contig168.3824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2787bp MKEKQKREARQRKTISSSGSQSLLQAAAGTGFIGFSAFQSPPSASTSIPVback to top mRNA from alignment at H-paniculata_contig168:3137..33529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig168.3824.1 ID=mRNA_H-paniculata_contig168.3824.1|Name=mRNA_H-paniculata_contig168.3824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=30393bp|location=Sequence derived from alignment at H-paniculata_contig168:3137..33529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig168:3137..33529+ >mRNA_H-paniculata_contig168.3824.1 ID=mRNA_H-paniculata_contig168.3824.1|Name=mRNA_H-paniculata_contig168.3824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=16722bp|location=Sequence derived from alignment at H-paniculata_contig168:3137..33529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |