prot_H-paniculata_contig16760.3812.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16760.3812.1
Unique Nameprot_H-paniculata_contig16760.3812.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
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BLAST of mRNA_H-paniculata_contig16760.3812.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.220e-10
Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 LPLAARDIRALAGEARSLIYDVCFSPVRQRLDCVPSLTTWAEQ 43
            LP  AR++RALA +ARSL++DVCF PV  RLD VP+L +W E+
Sbjct:  662 LPAPAREVRALAADARSLVFDVCFKPVTARLDTVPTLVSWQEE 704
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16760.3812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUF5_ECTSI5.220e-1060.47Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16760contigH-paniculata_contig16760:823..960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16760.3812.1mRNA_H-paniculata_contig16760.3812.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16760 823..960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16760.3812.1 ID=prot_H-paniculata_contig16760.3812.1|Name=mRNA_H-paniculata_contig16760.3812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
LPLAARDIRALAGEARSLIYDVCFSPVRQRLDCVPSLTTWAEQTIS
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