prot_H-paniculata_contig16756.3808.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16756.3808.1
Unique Nameprot_H-paniculata_contig16756.3808.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length449
Homology
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: D7G3J8_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J8_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 3.020e-151
Identity = 260/406 (64.04%), Postives = 290/406 (71.43%), Query Frame = 0
Query:    1 MHDLAGVVRPTDPARACALYRDALDLLEGARGKNHFLTAPTLAKLGSLVGESLVSAAAIPPAXXXXXXXXXXXXXXXXGLAEAVCAPGDAATSCDGVSTAAAVTAAAGDALDVKDAEDMIKRAVLIQGRHLGLRHPAVAASMRQMAELYRKQGRLAEAEPLFRKAIGIWENSPGP--MDTDAITALHGMAHCVLAGAGADWLGRFEEAFTLVDQAYRIASSQPGGYSSSRLLLEALRMIRSRQRQGRGDPQPASATVMDGVWNGRWDPNEWDGGGDAAPAEGRRHVRASSRAD-DQRCAVCLEEVGGGDETAEGRGGSXXXXXXXXXXXXGGLGED--------VPEIKPDIGTMEIVLTD-AEDGRARGRLAYLPCGHRFHTHCIGRWLVHSSSCPSCRNRIEDD 394
            MHDLAG+VRP DPARAC LYR AL  LE ARG NHFLTAPTLAKLG+L+GESLV+AA IP                  GLAEAVCA    +  C GV   +AV AAAG   D K AE+MIKRAVLIQGRHLGLRHPAVA+SMR MAELYR+QGRLAEAEPLFR+AIGIWE S G   MD+DAI ALHG AHCVLAGAGADWLGRFEEAF LVDQAYRIASS PG  +SSRLLLEALRMIRSRQRQGRGDPQPASA +M+GVW GRWDP + DG       +GR HVR+ S  D + RCAVCLEEVGGG+ T +G                G LG +          +   DIG+ E +  + AE   A G  AYLPCGHRFHTHCIGRWL HSSSCPSCR+++E++
Sbjct:  436 MHDLAGIVRPADPARACTLYRQALKTLEDARGVNHFLTAPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCA----SAGC-GVEDGSAVAAAAGVDWDPKKAEEMIKRAVLIQGRHLGLRHPAVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWELSRGGGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPGNDASSRLLLEALRMIRSRQRQGRGDPQPASAAIMEGVWTGRWDPAKNDGTSGGGATQGR-HVRSRSNGDGNPRCAVCLEEVGGGEPTVDG----------------GALGREGXXXXXXXXADWTADIGSEEGLRAETAESVHASGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRSQVEEE 819          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: A0A6H5JNZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ5_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.750e-82
Identity = 155/224 (69.20%), Postives = 168/224 (75.00%), Query Frame = 0
Query:    1 MHDLAGVVRPTDPARACALYRDALDLLEGARGKNHFLTAPTLAKLGSLVGESLVSAAAIPPAXXXXXXXXXXXXXXXXGLAEAVCAPGDAATSCDGVSTAAAVTAAAGDALDVKDAEDMIKRAVLIQGRHLGLRHPAVAASMRQMAELYRKQGRLAEAEPLFRKAIGIWENSPGP--MDTDAITALHGMAHCVLAGAGADWLGRFEEAFTLVDQAYRIASSQPG 222
            MHDLAG+VRP DPARAC LYR AL  LEGA G +HFLT PTLAKLG+L+GESLV+AA IP                  GLAEAVCA    +  C GV  ++AV AAAG   D K AE+MIKRA  IQGR LGLRHP VA+SMR MAELYR+QGRLAEAEPLFR+AIGIWE S G   MD+DAI ALHG AHCVLAGAGADWLGRFEEAF LVDQAYRIASS PG
Sbjct:  427 MHDLAGIVRPADPARACTLYRQALKTLEGACGVDHFLTTPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCA----SAGC-GVEDSSAVAAAAGVDWDPKKAEEMIKRAAFIQGRFLGLRHPTVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWEVSGGEGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPG 645          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: A0A6H5JPJ0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ0_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.460e-46
Identity = 92/170 (54.12%), Postives = 109/170 (64.12%), Query Frame = 0
Query:  227 SRLLLEALRMIRSRQRQGRGDPQPASATVMDGVWNGRWDPNEWDGGGDAAPAEGRRHVRASSRAD-DQRCAVCLEEVGGGDETAEGRGGSXXXXXXXXXXXXGGLGEDVPEIKPDIGTMEIVLTDA-EDGRARGRLAYLPCGHRFHTHCIGRWLVHSSSCPSCRNRIEDD 394
            SRLLLEALRMI SRQRQGRGDPQPASA +M+GVW GRWDP + +GG     A   RH R+    D + RCAVCLE VGGG+ T +G                GG      +   DIG+ E +  +  E   A    AYLPCGHRFHTHCIGRWLVHSSSCPSCR+++E++
Sbjct:   11 SRLLLEALRMIGSRQRQGRGDPQPASAAIMEGVWTGRWDPAK-NGGSSRGDATQGRHARSPGNGDGNPRCAVCLEAVGGGEPTVDG---------GALGREGGGRAAAAADWTADIGSDEGLRAETMESVHASRSFAYLPCGHRFHTHCIGRWLVHSSSCPSCRSQVEEE 170          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: UPI001BE10FAB (tetratricopeptide repeat protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001BE10FAB)

HSP 1 Score: 53.9 bits (128), Expect = 6.080e-6
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  131 LGLRHPAVAASMRQMAELYRKQGRLAEAEPLFRKAIGIWENS 172
            LG  HP VA S+  +AELYR QG+ A+AEPLF++++ IWE +
Sbjct:    2 LGPDHPDVATSLNNLAELYRSQGQYAQAEPLFKRSLAIWERA 43          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: UPI001F409832 (tetratricopeptide repeat protein n=1 Tax=Reticulibacter mediterranei TaxID=2778369 RepID=UPI001F409832)

HSP 1 Score: 54.3 bits (129), Expect = 1.840e-5
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  119 MIKRAVLIQGRHLGLRHPAVAASMRQMAELYRKQGRLAEAEPLFRKAIGIWENSPGPMDTDAITALHGMAHCVLAGAG 196
            M++RA+L+     G  H  VAA +  +A LY  QG+ AEAEPLF++A+ IWE+  G  ++     + G +   + GAG
Sbjct:    1 MLERALLVDEMVYGSDHLLVAADLTSLAHLYLDQGQYAEAEPLFKRALVIWEHKRGSEES-IHCGVFGQSRYAVPGAG 77          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: A0A6G1DJB9_9ORYZ (RING-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1DJB9_9ORYZ)

HSP 1 Score: 54.3 bits (129), Expect = 2.430e-5
Identity = 21/57 (36.84%), Postives = 31/57 (54.39%), Query Frame = 0
Query:  332 EDVPEIKPDIGTMEIVLTDAEDGRARGRLAYLPCGHRFHTHCIGRWLVHSSSCPSCR 388
            E + ++  D     ++  D +D  A GR   +PC HRFH  C+G+WL    +CP CR
Sbjct:   81 EALKDVDMDQHPESVICLDHQDAEAAGRWKEMPCDHRFHGRCLGKWLRVHGTCPMCR 137          
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Match: A0A3P8W9G5_CYNSE (RING-type domain-containing protein n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8W9G5_CYNSE)

HSP 1 Score: 51.6 bits (122), Expect = 5.260e-5
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  344 MEIVLTDAEDGRARG-RLAYLPCGHRFHTHCIGRWLVHSSSCPSCR 388
            M+ V     D  A+G +L  LPC HRFH HCI RWL ++++CP+C+
Sbjct:   23 MDQVCGVCIDEYAQGNKLRRLPCSHRFHIHCIDRWLSNNNTCPTCQ 68          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16756.3808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G3J8_ECTSI3.020e-15164.04TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JNZ5_9PHAE1.750e-8269.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPJ0_9PHAE2.460e-4654.12RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001BE10FAB6.080e-654.76tetratricopeptide repeat protein n=1 Tax=Klebsiell... [more]
UPI001F4098321.840e-538.46tetratricopeptide repeat protein n=1 Tax=Reticulib... [more]
A0A6G1DJB9_9ORYZ2.430e-536.84RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A3P8W9G5_CYNSE5.260e-547.83RING-type domain-containing protein n=1 Tax=Cynogl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 295..387
e-value: 2.6E-6
score: 37.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 361..388
e-value: 3.5E-9
score: 36.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 295..388
score: 9.775
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 278..395
e-value: 1.7E-15
score: 58.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 114..170
e-value: 8.5E-9
score: 35.6
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 114..218
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 114..218
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 359..394
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 104..251
e-value: 1.7E-20
score: 75.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 112..224
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 139..172
score: 8.319
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 139..172
score: 8.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16756contigH-paniculata_contig16756:1046..5007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16756.3808.1mRNA_H-paniculata_contig16756.3808.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16756 219..5118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16756.3808.1 ID=prot_H-paniculata_contig16756.3808.1|Name=mRNA_H-paniculata_contig16756.3808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=449bp
MHDLAGVVRPTDPARACALYRDALDLLEGARGKNHFLTAPTLAKLGSLVG
ESLVSAAAIPPAPAAPAGPGAAGVARAAGLAEAVCAPGDAATSCDGVSTA
AAVTAAAGDALDVKDAEDMIKRAVLIQGRHLGLRHPAVAASMRQMAELYR
KQGRLAEAEPLFRKAIGIWENSPGPMDTDAITALHGMAHCVLAGAGADWL
GRFEEAFTLVDQAYRIASSQPGGYSSSRLLLEALRMIRSRQRQGRGDPQP
ASATVMDGVWNGRWDPNEWDGGGDAAPAEGRRHVRASSRADDQRCAVCLE
EVGGGDETAEGRGGSGGGGGGGGGAVGGGLGEDVPEIKPDIGTMEIVLTD
AEDGRARGRLAYLPCGHRFHTHCIGRWLVHSSSCPSCRNRIEDDIADQES
TRSTTSSSVSPATEGGDAEQPATVGGGGRRGPEDGGSGSVGDGPAPFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom