prot_H-paniculata_contig16734.3800.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16734.3800.1
Unique Nameprot_H-paniculata_contig16734.3800.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.170e-36
Identity = 78/201 (38.81%), Postives = 126/201 (62.69%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFSM-------PCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            +I  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  +++MD+GER  +   +G+ Q DGMGP LFS+         +++++ LGV   AY+DD+ L + +LT E+++A+  LV ELA +G+ +N AK+  +PP  H+ T+++   L  +G++VA G G  VVG P+G     R  + +  ++G GAE LAR+L
Sbjct:  677 IIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVA-GEGITVVGVPIGTDNYVREFAMKVITEG-GAEKLARML 875          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.730e-32
Identity = 76/204 (37.25%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLLAHI 196
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E  A  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L H+
Sbjct:   95 VVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVLTEG-GADKLARMLVHM 296          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.030e-31
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L   ++T EN++    LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GAE LARLL
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GAEKLARLL 704          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.120e-31
Identity = 76/201 (37.81%), Postives = 113/201 (56.22%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 705          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.770e-31
Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFSM-------PCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF           R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR++
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARMV 344          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.990e-31
Identity = 76/202 (37.62%), Postives = 114/202 (56.44%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLV-LAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD++ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 337          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.410e-31
Identity = 75/201 (37.31%), Postives = 113/201 (56.22%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  +V EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 252          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 4.540e-31
Identity = 75/201 (37.31%), Postives = 111/201 (55.22%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+G R  I    G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  229 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITEG-GADKLARML 427          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.080e-29
Identity = 74/201 (36.82%), Postives = 111/201 (55.22%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T E ++ I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +AE  G  VVG P+         + +  ++G GA+ LAR+L
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITEG-GADKLARML 731          
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.340e-28
Identity = 76/203 (37.44%), Postives = 115/203 (56.65%), Query Frame = 0
Query:    1 LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDTGERLKISSNTGIHQSDGMGPALFS-------MPCREQFEALGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARIGVQINNAKTKVV-PPMNHI-PTEREVAALAAMGISVAEGRGAVVVGTPMGP-TISRSASRRHSSQGKGAEHLARLL 193
            ++  DC+NAFN+ +R AI+ +     P L  ++A+CY E PA  I+ MD+GER  I   +G+ Q DGMGP LF        +  R +++ LGV L AY+DD+ L    +T EN++ I  LV EL  +G+ +N  K+  + PP   + P ER +  L   G+ +AE  G  VVG P+G        + +  ++G GA+ LAR+L
Sbjct:  528 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL--LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAEG-GADKLARML 726          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16734.3800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE6.170e-3638.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE1.730e-3237.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE1.030e-3138.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE2.120e-3137.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE3.770e-3137.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE3.990e-3137.62Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE4.410e-3137.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE4.540e-3137.31Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KJC0_9PHAE1.080e-2936.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE3.340e-2837.44Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..132
e-value: 1.7E-8
score: 34.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..154
score: 11.438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16734contigH-paniculata_contig16734:5154..5762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16734.3800.1mRNA_H-paniculata_contig16734.3800.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16734 5154..5762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16734.3800.1 ID=prot_H-paniculata_contig16734.3800.1|Name=mRNA_H-paniculata_contig16734.3800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
LIALDCTNAFNSVERAAILKEVPIRTPGLTPFVAKCYGEKPADIIFQMDT
GERLKISSNTGIHQSDGMGPALFSMPCREQFEALGVELLAYLDDLVLAMG
ELTGENLRAIHFLVQELARIGVQINNAKTKVVPPMNHIPTEREVAALAAM
GISVAEGRGAVVVGTPMGPTISRSASRRHSSQGKGAEHLARLLAHI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom