prot_H-paniculata_contig16730.3799.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16730.3799.1
Unique Nameprot_H-paniculata_contig16730.3799.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
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BLAST of mRNA_H-paniculata_contig16730.3799.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.430e-21
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 0 
Query:   12 SPLLSSIVQCGVVGLQLHHREAQRGVLHCLEEVVGLAIPQTAKGAVNPNAQRFMPTVQK 70
            SPLLSS+V+CG+VGLQLHHREAQRGVLHCLEEVVGLA+ +   G  NP AQ+FMPTV++
Sbjct:  844 SPLLSSLVRCGMVGLQLHHREAQRGVLHCLEEVVGLAMAEGPTGKANPRAQQFMPTVEQ 902
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BLAST of mRNA_H-paniculata_contig16730.3799.1 vs. uniprot
Match: A0A7S3NIA9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIA9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.370e-8
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0 
Query:   12 SPLLSSIVQCGVVGLQLHHREAQRGVLHCLEEVVGLAIPQTAKGAVN-----PNAQR 63
            SPLL S+++CG+VGL L HREAQRG+LHC E  V +A       + N     P+A+R
Sbjct:  961 SPLLESVLRCGIVGLALEHREAQRGILHCFERTVVVAYEAALNASQNGDPSTPDARR 1017
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16730.3799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR94_ECTSI2.430e-2174.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3NIA9_9STRA3.370e-849.12Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..70
e-value: 1.7E-6
score: 28.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16730contigH-paniculata_contig16730:5200..5409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16730.3799.1mRNA_H-paniculata_contig16730.3799.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16730 5200..5409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16730.3799.1 ID=prot_H-paniculata_contig16730.3799.1|Name=mRNA_H-paniculata_contig16730.3799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
LPWRTLSVGRCSPLLSSIVQCGVVGLQLHHREAQRGVLHCLEEVVGLAIP
QTAKGAVNPNAQRFMPTVQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like