mRNA_H-paniculata_contig1672.3793.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig1672.3793.1
Unique Name	mRNA_H-paniculata_contig1672.3793.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: D8LFD6_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD6_ECTSI)

HSP 1 Score: 866 bits (2238), Expect = 4.840e-308
Identity = 414/469 (88.27%), Postives = 444/469 (94.67%), Query Frame = 3

Query:  228 STDIPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEMNH 1634
            +T++PSTLPGNV+L  HDP +FDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEG+PGARYYGGNQVVD+IE LCQ+RALEAYGLDPE+WGVNVQPYSGSPANFA YT LLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV PDTG+ID+ DLARLAGLFKPAM++CGGSAYPR+WDY KFREIADANGALLLCDMAHISGLVVTKEAASPFD CDVVTTTTHKSLRGPRAGLIFYRKDER F +KIN AVFPALQGGPHEHQIAGVATQL EAMTPEFKEY +QVKKNA+ACAD LVK GYTICTGGTENHLLLWDLRP+ALTGSKMEKICDKVHITLNKNAVQGDRSA+SPGGVR+G PALTTRGMKE EFR IA FMDRAAQLA+K Q+ +GKMLKDF +A+E+DEEVKALGD+V AFA++WPMPGFEASELKFKEM+H
Sbjct:    3 TTEVPSTLPGNVSLADHDPAMFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGVPGARYYGGNQVVDQIEGLCQSRALEAYGLDPEKWGVNVQPYSGSPANFAAYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPDTGLIDHDDLARLAGLFKPAMVICGGSAYPREWDYAKFREIADANGALLLCDMAHISGLVVTKEAASPFDHCDVVTTTTHKSLRGPRAGLIFYRKDERGFESKINQAVFPALQGGPHEHQIAGVATQLKEAMTPEFKEYIIQVKKNASACADELVKLGYTICTGGTENHLLLWDLRPKALTGSKMEKICDKVHITLNKNAVQGDRSAMSPGGVRIGAPALTTRGMKEPEFRQIAAFMDRAAQLAIKIQQGSGKMLKDFAIALESDEEVKALGDDVKAFARRWPMPGFEASELKFKEMDH 471

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A836CHR3_9STRA (Glycine hydroxymethyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR3_9STRA)

HSP 1 Score: 778 bits (2008), Expect = 3.160e-273
Identity = 370/464 (79.74%), Postives = 415/464 (89.44%), Query Frame = 3

Query:  237 IPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEM 1628
            IP TLPGN++LE+HDPV+ DLIEKEKTRQWS LELIASENFTSRAVM+CLGSALTNKYAEGLP ARYYGGN++VD+IE LC+ RALEAY LDP+ WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSK E TRKAVSATSVYFESLPYRV+P+TG+ID+ +L +LA LFKPAMIVCGGSAYPRDWDY +FR IAD NGALLLCDMAHISGLV+T+EA +PFD CDVVTTT HKS+RGPRAG+IF++KD R+F  +INNAVFPALQGGPHEHQIAG+ATQL E M+P FK Y  QVK NAAACA  LV+ GYT+CTGGTENHLLLWDLRPQ LTGSKMEKICD VHITLNKNAVQGDRSAVSPGGVR+G PALTTRGM  A+F+ IADF+ RAAQ+ALK Q+T+GK LK FV A+ N+ ++KALGDEV AFAQ++PMPGF  SELK+K +
Sbjct:    4 IPKTLPGNMSLEEHDPVMADLIEKEKTRQWSCLELIASENFTSRAVMECLGSALTNKYAEGLPHARYYGGNEIVDQIEDLCRNRALEAYRLDPKEWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKAENTRKAVSATSVYFESLPYRVNPETGLIDFDELRKLAALFKPAMIVCGGSAYPRDWDYTQFRAIADENGALLLCDMAHISGLVLTQEANNPFDYCDVVTTTCHKSMRGPRAGMIFFKKDSRNFEPRINNAVFPALQGGPHEHQIAGIATQLKECMSPVFKTYIQQVKTNAAACAARLVEHGYTLCTGGTENHLLLWDLRPQGLTGSKMEKICDAVHITLNKNAVQGDRSAVSPGGVRIGAPALTTRGMGAADFQAIADFLHRAAQIALKIQETSGKQLKQFVEALANNADIKALGDEVTAFAQRFPMPGFNVSELKYKTL 467

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A6V3AI80_HETAK (Serine hydroxymethyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AI80_HETAK)

HSP 1 Score: 724 bits (1870), Expect = 2.280e-252
Identity = 342/468 (73.08%), Postives = 395/468 (84.40%), Query Frame = 3

Query:  225 MSTDIPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEM 1628
            M+  IP  LPGN +LE+HDP +FDLIE+EK RQW SLELIASENFTSRAV +CLGSALTNKYAEGLPGARYYGGN+ VD++E+LC +RAL AY L+P+ WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYS+ E TRKAVSATSVYFESLPYRV P+TG++DY+ L   A L+KPA+IVCGGSAYPRDWDY +FR IAD NG++L+CDMAHISGLV T+EA +PF+ CDVVTTTTHKSLRGPRAGLIF+R+D+RDF  KINNAVFPALQGGPHEHQIA VATQL E  TPEFK Y VQVK N+ A AD L  KGY +CTGGT+NHL+LWDLRP+ LTGSK EKICD +HITLNKNAV GDRSAVSPGGVR+G PALTTRG KE  F  +A+F+  A  LA + Q ++GKMLKDFV A++ D +V+ L   V AFA ++PMPGFE S +++  +
Sbjct:    1 MAAFIPDKLPGNASLEEHDPEMFDLIEREKQRQWRSLELIASENFTSRAVFECLGSALTNKYAEGLPGARYYGGNEYVDQVENLCISRALTAYRLNPDEWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSRAENTRKAVSATSVYFESLPYRVHPETGLLDYEKLREQAALYKPALIVCGGSAYPRDWDYAQFRAIADENGSILMCDMAHISGLVATQEANNPFEHCDVVTTTTHKSLRGPRAGLIFFRRDDRDFPRKINNAVFPALQGGPHEHQIAAVATQLKEVATPEFKAYAVQVKANSKAVADALTAKGYRMCTGGTDNHLVLWDLRPEGLTGSKYEKICDAIHITLNKNAVVGDRSAVSPGGVRIGAPALTTRGFKEEHFVQVAEFLHEAVVLAKEIQASSGKMLKDFVAALKTDAKVQELAGRVSAFATQFPMPGFEVSGMRYNSV 468

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A7S2MVH6_9STRA (Serine hydroxymethyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVH6_9STRA)

HSP 1 Score: 721 bits (1862), Expect = 5.970e-251
Identity = 347/458 (75.76%), Postives = 391/458 (85.37%), Query Frame = 3

Query:  255 GNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEM 1628
            G V LE+HDP ++DLIE+EK RQW SLELIASENFTSRAVMDCLGSALTNKY+EGLP ARYYGGN+V+D+IESLCQ RALEAYGLDPE+WGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV P+TGIIDY+ L+R AGLFKPA+I+ GGSAYPR WDY KFREIADANG+LL+ DMAHISGLV T  ++SPF+ CDVVTTTTHKSLRGPRAG+IF+RKDER F TKIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y+ QV KNAAA AD L   GYT+ TGGT NHL+LWDL+PQ +TGSK EK CD V ITLNKN V GDRSA++PGGVR+G PALTTR M EA+F  IA F+  A Q+ALK Q+ +G  LKDFV  +E +EE+ AL  +V  FA  +PMPGF+ S++K+  +
Sbjct:   24 GLVPLEEHDPEMYDLIEQEKARQWKSLELIASENFTSRAVMDCLGSALTNKYSEGLPHARYYGGNEVIDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPETGIIDYEQLSRDAGLFKPALIIAGGSAYPRHWDYAKFREIADANGSLLMTDMAHISGLVATGASSSPFEYCDVVTTTTHKSLRGPRAGMIFFRKDERGFETKINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKTYSDQVCKNAAALADKLTSMGYTMATGGTVNHLVLWDLKPQKITGSKFEKTCDAVSITLNKNCVPGDRSAITPGGVRIGAPALTTRKMVEADFEQIAMFLHEALQIALKIQEQSGPKLKDFVALLEKNEEIVALRGKVNQFASSFPMPGFDPSQMKYNTL 481

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A7R9WYA7_9STRA (Serine hydroxymethyltransferase n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYA7_9STRA)

HSP 1 Score: 721 bits (1860), Expect = 9.590e-251
Identity = 346/459 (75.38%), Postives = 393/459 (85.62%), Query Frame = 3

Query:  255 GNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEMN 1631
            G V+LE HDP LFDLIE+EK+RQW SLELIASENFTS+AVMDCLGSALTNKYAEGLP ARYYGGN+VVD++E LCQ RAL AYGLDPE+WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV P+TG+IDY  LA  A LFKPAMI+ GGSAYPRD+DY KF+EIADANGALL+ DMAH SGLV T+E ASPF+ CDVVTTTTHKSLRGPRAG+IF+RKDER F ++IN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y+ QVK NA A AD L   GY++ +GGTENHL+LWDL+P+ +TGSK EK CD V ITLNKN V GDRSAV+PGGVR+G PALTTR M EA+F  IA F+  A +++LK Q+ TGK LKDF+  ++N+EE+K L  +V AFA  +PMPGF+  E+K+K+ N
Sbjct:   11 GLVSLEDHDPELFDLIEQEKSRQWRSLELIASENFTSKAVMDCLGSALTNKYAEGLPHARYYGGNEVVDQVEELCQKRALAAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPETGLIDYDQLATNAALFKPAMIIAGGSAYPRDYDYAKFKEIADANGALLMMDMAHTSGLVATEELASPFEHCDVVTTTTHKSLRGPRAGMIFFRKDERGFESRINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKVYSQQVKSNAKALADKLTSLGYSMASGGTENHLVLWDLKPKGITGSKFEKTCDAVCITLNKNCVPGDRSAVTPGGVRIGAPALTTRKMVEADFEQIAMFLHEALEISLKIQEKTGKKLKDFIPELDNNEEIKTLRSKVNAFATTFPMPGFDPKEMKYKDPN 469

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A1E7EPI0_9STRA (Serine hydroxymethyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPI0_9STRA)

HSP 1 Score: 713 bits (1840), Expect = 9.030e-248
Identity = 339/457 (74.18%), Postives = 390/457 (85.34%), Query Frame = 3

Query:  255 GNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKE 1625
            G V+LE HDP LFDLIE+EK RQW SLELIASENFTS+AVMDCLGSALTNKY+EGLPGARYYGGN+VVD++E+LCQ RAL+AYGLDPE+WGVNVQPYSGSPANFAVYTGLL+PHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFES PYRV P+TG +D+  LAR AG+FKPAMI+CGGSAYPRDWDYGKFREIADANG+LL+ DMAHISGLV T E  SPFD CDVVTTTTHKSLRGPRAG+IF+RKDER F TKIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y+ QVKKNA A A+ L  KGY + +GGTENHL+LWDL+P  +TGSK EK CD V+ITLNKN V GDRSA++PGGVR+G  ALTTR M E +F  IA+ +    + ALK Q+ +G  LKDF   ++ DE +K++ + V AFA  +PMPGF+ +++K+++
Sbjct:   11 GLVSLEDHDPELFDLIEQEKNRQWRSLELIASENFTSKAVMDCLGSALTNKYSEGLPGARYYGGNEVVDQVETLCQKRALKAYGLDPEKWGVNVQPYSGSPANFAVYTGLLKPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESFPYRVHPETGYVDHDGLARDAGVFKPAMIICGGSAYPRDWDYGKFREIADANGSLLMMDMAHISGLVATGEQTSPFDYCDVVTTTTHKSLRGPRAGMIFFRKDERGFETKINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKVYSQQVKKNANALAEKLQSKGYKMASGGTENHLVLWDLKPAGITGSKYEKCCDFVNITLNKNCVPGDRSAITPGGVRIGACALTTRKMCEPDFEQIAELLHEVLEAALKLQEKSGPKLKDFTALLDGDETLKSIRERVNAFATTFPMPGFDPTKMKYQK 467

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A7S4IQ68_9STRA (Serine hydroxymethyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQ68_9STRA)

HSP 1 Score: 711 bits (1834), Expect = 6.290e-247
Identity = 341/458 (74.45%), Postives = 385/458 (84.06%), Query Frame = 3

Query:  255 GNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEM 1628
            G V+LE+HDP ++DLIE+EK RQW+ LELIASENFTSRAVM+CLGSALTNKYAEGLP ARYYGGN+VVD+IESLCQ RALEAYGLDPE+WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKE TRKAVSATSVYFES PYRV P+TG IDY  LA  A  FKPA+I+CGGSAYPRDWDY KFR+IAD NG+LLLCDMAHISGLV T E ++PFDLCDVVTTTTHKSLRGPRAG+IF+RKDER F  KIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y  QV+KNA A AD L   GY++ TGGT+NHL+LWDL+PQ +TGSK EK CD V ITLNKN V GDRSAV+PGGVR+G PALTTR M E +F  IA F+    ++ALK Q+ +G  LKDFV  +E ++E+K L   V  FA K+PMPGF+ + +K+  +
Sbjct:   11 GLVSLEEHDPEMYDLIEQEKHRQWTGLELIASENFTSRAVMECLGSALTNKYAEGLPHARYYGGNEVVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEKTRKAVSATSVYFESFPYRVHPETGYIDYDKLADDAATFKPALIICGGSAYPRDWDYAKFRKIADDNGSLLLCDMAHISGLVATGEQSTPFDLCDVVTTTTHKSLRGPRAGMIFFRKDERGFEAKINQAVFPALQGGPHEHQIAGVATQLKECMTPEFKVYAQQVRKNAKALADKLTSMGYSMATGGTDNHLVLWDLKPQGITGSKFEKACDAVSITLNKNCVPGDRSAVTPGGVRIGAPALTTRKMTEEDFEQIAAFLAETLKIALKLQEQSGPKLKDFVALLEGNDEMKELKKRVNEFAVKFPMPGFDPTTMKYNTV 468

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A7S2NVQ7_9STRA (Serine hydroxymethyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVQ7_9STRA)

HSP 1 Score: 711 bits (1834), Expect = 7.840e-247
Identity = 346/470 (73.62%), Postives = 393/470 (83.62%), Query Frame = 3

Query:  225 MSTDIPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFV-LAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEMN 1631
            MS+   +   G   LE+HDP+L DLIE+EK+RQW SLELIASENFTS+AVM+CLGS LTNKY+EGLP ARYYGGN+VVD+IE LCQ RALEAYGLDPE+WGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSK EGTRKAVSATSVYFESLPYRV+  TGI+DY +L R A LFKPAMI+ GGSAYPRDWDY K+R IADANGALLL DMAHISG+V T E  +PFD CDVVTTTTHKSLRGPRAG+IF+RKDER F +KIN AVFPALQGGPHEHQIAGVATQL E MTP+FK Y  QVKKNA+A AD L   GYTI TGGTENHL+LWDL+PQ +TGSK EK CD V+ITLNKN V GDRSAV+PGGVR+G PALTTR M EA+F  IA+F+ RA +++L  Q+ +G  LKDFV +  E++EE+ AL  EV  FA  +PMPGF+ S +K+K+ N
Sbjct:    1 MSSFKDAKFTGLTPLEEHDPLLHDLIEQEKSRQWRSLELIASENFTSKAVMECLGSCLTNKYSEGLPHARYYGGNEVVDQIEVLCQQRALEAYGLDPEKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKTEGTRKAVSATSVYFESLPYRVNQVTGIVDYDELERTAALFKPAMIIAGGSAYPRDWDYAKYRAIADANGALLLMDMAHISGIVATGECNNPFDYCDVVTTTTHKSLRGPRAGMIFFRKDERGFESKINQAVFPALQGGPHEHQIAGVATQLKEVMTPDFKTYIQQVKKNASALADKLSSMGYTIATGGTENHLVLWDLKPQGVTGSKFEKTCDAVNITLNKNCVPGDRSAVAPGGVRIGAPALTTRKMVEADFEQIAEFLVRALKISLAIQEKSGPKLKDFVRILAEDNEEINALRSEVNKFATSFPMPGFDPSGMKYKDTN 470

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BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A5A8DGJ8_CAFRO (Serine hydroxymethyltransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGJ8_CAFRO)

HSP 1 Score: 711 bits (1834), Expect = 8.760e-247
Identity = 337/469 (71.86%), Postives = 392/469 (83.58%), Query Frame = 3

Query:  210 ALSYKMSTDIPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTT-GKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASEL 1613
            A S   ++  P+TLPGNVAL++HDP +F+LIE+EK RQW SLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGN+VVD +E LCQ+RAL+AYGL+P+ WGVNVQPYSGSPANFAVYT LL+PHDRIMGLDLPSGGHLTHGFYTYSKKEGTRK+VSATS+YFESLPYRV  +TG+ID++ L   A LFKPAM+VCGGSAYPRDWDY KFREIAD NG+LL+CDMAHISGLV TKEA  PF+ CD+VTTTTHKSLRGPRAG+IF+RKD R F  KIN AVFP+LQGGPHEHQIAG+ATQL E M+ EFK Y  QVK NA A  + LV+ GYT+ TGGT+NHLLLWDLRPQ +TGSK+EK+CD   IT+NKN+V GDRSA+SPGGVR+GTPALTTRG  EA+FR +ADF+ R+ Q+ L+ Q     K L DFV   + DEE+  L  +V AFA ++ MPG+   E+
Sbjct:    4 AASTATTSTPPATLPGNVALKEHDPEMFELIEREKNRQWKSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEVVDEVERLCQSRALKAYGLNPDEWGVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKSVSATSIYFESLPYRVSSETGLIDFESLEHTAALFKPAMLVCGGSAYPRDWDYAKFREIADKNGSLLMCDMAHISGLVATKEARDPFEFCDIVTTTTHKSLRGPRAGMIFFRKDARGFEPKINFAVFPSLQGGPHEHQIAGIATQLKEVMSDEFKAYIRQVKANARAIGEALVEHGYTLATGGTDNHLLLWDLRPQGITGSKIEKLCDAACITVNKNSVYGDRSAMSPGGVRIGTPALTTRGFTEADFRAVADFLHRSVQIGLRMQAAAPSKRLDDFVKLFDGDEELATLRKDVNAFASRFAMPGWTKDEM 472

[Close]

BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Match: A0A421GFT4_9STRA (Serine hydroxymethyltransferase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GFT4_9STRA)

HSP 1 Score: 710 bits (1833), Expect = 1.930e-246
Identity = 344/482 (71.37%), Postives = 398/482 (82.57%), Query Frame = 3

Query:  186 EFILSCTLALSYKMSTDIPS-TLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAYPRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTTHKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLLEAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQALTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAEFRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFAQKWPMPGFEASELKFKEM 1628
            EF++   L+L+   + ++P  +LPGN  LEQ DP +F+LIE EK RQW  LELIASENFTSRAVMDCLGS LTNKYAEGLP ARYYGGN+++D+IE+LCQ RAL+AYGLD ++WGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSK E TRKAVSATSVYFESLPYRV  DTG+ID++ LA  A LFKPAMIVCGGSAYPRDWDY  FR+IAD NGALL+CDMAH SGLVVT E ASPFD CDVVTTTTHKSLRGPRAG+IF+R+DER F  +INNAVFPALQGGPHEHQIAG+A QL E  T EFK Y  Q+K NA   A+ L +KGY++CTGGT+NHL+LWDLRPQ +TGSK+EK+CD V ITLNKNAV GDRSA++PGGVRVGTPALT+RG KEAEF  +A+F+DRA +L ++ Q T+GK L DFV A +  E VK L  EV   A  + MPGF+ SE++ K +
Sbjct:    6 EFLVVQYLSLAKTRAWNVPGISLPGNATLEQQDPEIFNLIEAEKNRQWKCLELIASENFTSRAVMDCLGSCLTNKYAEGLPNARYYGGNEIIDQIETLCQNRALQAYGLDADKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKAEKTRKAVSATSVYFESLPYRVSADTGLIDFEKLAEQAALFKPAMIVCGGSAYPRDWDYAAFRKIADDNGALLMCDMAHYSGLVVTGEHASPFDYCDVVTTTTHKSLRGPRAGMIFFRRDERGFEPRINNAVFPALQGGPHEHQIAGIAAQLKEVQTEEFKTYVKQLKANAKILANTLTEKGYSMCTGGTDNHLILWDLRPQGVTGSKLEKLCDMVSITLNKNAVLGDRSALTPGGVRVGTPALTSRGFKEAEFVKVAEFLDRAVKLCVEIQSTSGKKLVDFVKAADVHEGVKQLRREVNGLATSFEMPGFKVSEMRNKTI 487

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1672.3793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFD6_ECTSI	4.840e-308	88.27	Serine hydroxymethyltransferase n=2 Tax=Ectocarpus...	[more]
A0A836CHR3_9STRA	3.160e-273	79.74	Glycine hydroxymethyltransferase n=2 Tax=Tribonema...	[more]
A0A6V3AI80_HETAK	2.280e-252	73.08	Serine hydroxymethyltransferase n=1 Tax=Heterosigm...	[more]
A0A7S2MVH6_9STRA	5.970e-251	75.76	Serine hydroxymethyltransferase n=1 Tax=Helicothec...	[more]
A0A7R9WYA7_9STRA	9.590e-251	75.38	Serine hydroxymethyltransferase n=2 Tax=Craspedost...	[more]
A0A1E7EPI0_9STRA	9.030e-248	74.18	Serine hydroxymethyltransferase n=1 Tax=Fragilario...	[more]
A0A7S4IQ68_9STRA	6.290e-247	74.45	Serine hydroxymethyltransferase n=1 Tax=Odontella ...	[more]
A0A7S2NVQ7_9STRA	7.840e-247	73.62	Serine hydroxymethyltransferase n=1 Tax=Leptocylin...	[more]
A0A5A8DGJ8_CAFRO	8.760e-247	71.86	Serine hydroxymethyltransferase n=2 Tax=Cafeteria ...	[more]
A0A421GFT4_9STRA	1.930e-246	71.37	Serine hydroxymethyltransferase n=2 Tax=Phytophtho...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1672	contig	H-paniculata_contig1672:1084..11407 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	709.9
Seed ortholog evalue	7.8e-202
Seed eggNOG ortholog	112098.XP_008613015.1
Preferred name	SHMT-L
KEGG rclass	RC00022,RC00112,RC01583,RC02958
KEGG ko	ko:K00600
KEGG Reaction	R00945,R09099
KEGG Pathway	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523
KEGG Module	M00140,M00141,M00346,M00532
Hectar predicted targeting category	other localisation
EggNOG free text desc.	glycine hydroxymethyltransferase activity
EggNOG OGs	COG0112@1,KOG2467@2759
Ec32 ortholog description	serine hydroxymethyltransferase 2
Ec32 ortholog	Ec-07_005890.1
EC	2.1.2.1
COG Functional cat.	H
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000
Exons	9
Model size	2964
Cds size	1413
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929325.1767337-UTR-H-paniculata_contig1672:1083..2410	1622929325.1767337-UTR-H-paniculata_contig1672:1083..2410	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1672 1084..2410 -
1691480816.5244164-UTR-H-paniculata_contig1672:1083..2410	1691480816.5244164-UTR-H-paniculata_contig1672:1083..2410	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1672 1084..2410 -
1622929325.34795-UTR-H-paniculata_contig1672:11183..11407	1622929325.34795-UTR-H-paniculata_contig1672:11183..11407	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1672 11184..11407 -
1691480816.631483-UTR-H-paniculata_contig1672:11183..11407	1691480816.631483-UTR-H-paniculata_contig1672:11183..11407	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1672 11184..11407 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1672.3793.1	prot_H-paniculata_contig1672.3793.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig1672 2411..11183 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig1672:1084..11407-
coding sequence from alignment at H-paniculata_contig1672:1084..11407-

protein sequence of mRNA_H-paniculata_contig1672.3793.1

>prot_H-paniculata_contig1672.3793.1 ID=prot_H-paniculata_contig1672.3793.1|Name=mRNA_H-paniculata_contig1672.3793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=471bp
MSTDIPSTLPGNVALEQHDPVLFDLIEKEKTRQWSSLELIASENFTSRAV
MDCLGSALTNKYAEGLPGARYYGGNQVVDRIESLCQARALEAYGLDPERW
GVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEG
TRKAVSATSVYFESLPYRVDPDTGIIDYKDLARLAGLFKPAMIVCGGSAY
PRDWDYGKFREIADANGALLLCDMAHISGLVVTKEAASPFDLCDVVTTTT
HKSLRGPRAGLIFYRKDERDFGTKINNAVFPALQGGPHEHQIAGVATQLL
EAMTPEFKEYTVQVKKNAAACADHLVKKGYTICTGGTENHLLLWDLRPQA
LTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGVRVGTPALTTRGMKEAE
FRMIADFMDRAAQLALKTQKTTGKMLKDFVLAIENDEEVKALGDEVIAFA
QKWPMPGFEASELKFKEMNH*

mRNA from alignment at H-paniculata_contig1672:1084..11407-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig1672.3793.1 ID=mRNA_H-paniculata_contig1672.3793.1|Name=mRNA_H-paniculata_contig1672.3793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10324bp|location=Sequence derived from alignment at H-paniculata_contig1672:1084..11407- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTTCGCTTTGCAAGGTTAGCGCGGGAGCACATAAAGCGCACGAGAACCG
GTGCTGTCATCTTTCGTGTCGCCTTTGGCACAATCTTGAGATTCATCTTA
GGACCGTGCGCTAGCTTCATACACTGTCCGTCTGCAGGGTTCGTGTTTCT
GTAGTTGAGCCTCCCTTCGTACCCCAGCGCCCTCCGAATTCATTCTTTCC
TGCACACTCGCACTTTCCTACAAAATGTCGACTGATATTCCGTCTACACT
GCCTGGGAACGTCGCCCTCGAGCAGCATGATCCGGTGTTGTTTGACCTCA
TCGAGAAAGAGAAGGTGCGGTTGCTAGTTCTCTTCAGATAGGGTAAAACT
TGGCGGGGGCTGCATTGATGAGTGCACAGAGCGTTGGCTTGGGACGTGTT
TAGCAGCGGGGAGAGTTGTCATTGAGTGTCTTTTGTGTCAGAGTTAAAAT
ATCTAGGTGGTTCTGCCCTGAGGCGTCGGTTTTCCCTGTGCATGAGGTGA
TGACTTACATATTGTCTTCTTGGACTGACTGTATGTGCTGTGTCATGCTG
ACTCTATCTTGTTGTTGCGTGCGGAACTCGTTACACGGTAAGGTACGGCC
GGCTCTAGGTAGGCGATTGTTGGTGTTGATCGAGCGCGCGAATTGCTTCT
GCAGGAAAGTAATCATGGCGGGACAACTTTTTCAATAACATGATTATCAC
ACATCCACAAATTTCTCATTCATGAAAGTACAGGATGCTCCAGTACAGTC
AGCACCGGACATGCGTGGAGAGGTGCATGTTGAGCGCGTCACCACAAGCC
AACCCAATATACGGCTTCGTTACGAATAACCCTGGCAGCATCGATTTTCC
GGAAGTAGGAGCATGTTCACGCTCATGGGTATACTAAATAAACCACCACT
TGTCACGCTTATTTAATCTATTATAGCACTATGTCTACACATTCGATAAC
CTTCCCCAGAAACACCCAAGTTATGGAATCTTGAAAACATACGAAGACCT
TGTACAAGCCGTTGTTTTACTCCGGAACCTGTCCATGGTTATGTGGGGTT
GAGACCAACAGTCGGACGTAGGGATTTAAGTCCCAGGCTTTTTGAGGCTG
TGGCCTCCAACTGGCGATCTTATTTCCCGTTTTTTGTCCCATCACATTCG
ACTATCTCGCAGTCAATACTCCGTTGGTCGTCGTAGTGTTGATGCTTCCA
GTGTGTTCTTGGCAAAGTTGATTTGATGTATTTATATAGCGTTGCCACAC
AGGATTTCGACACATCGACCGTGGGTCTGCATGATCGGGGCCAAAGTGTT
GAATGATAACATGTAGGATCTTGGAGAACACGATAATAACACGCCTCCGC
AACGGGACGGAGACAAAACCGTAGTACCTACATCGCAAATTTGACATGAT
CGTTTGGTCGTTGATCTTTCATCTCGGTACAAATGACGAGATGTGTGTTC
ACCCAAGGTTGGCGTTATGATCTTTGCCCGTGCGGGACGTTTTGGGTGTG
TTCGTTGCCGAAAGCTAAAGTGATACAAGGTCCGATCGGTACACACGTGG
TTGAGGTAGTTGGTGTTTTGAGAAGAGCTGCGTTACGTGGGGCTACCCTC
GGCAGGTCAATTACTGGTCACCGAATGTGTCTGACTCCATTGTCTTAGCT
TATATATCTTCACACTAGACAACATGTACAGCACCTGGGATCACATCCTT
GAAAAGTGAGTCTTAACCCCAAGCATTTGTATCGCGTGCAGAGGCTGGAC
GGCACCACTGTGACAGTGTTTAACCTGGTCATATTCGAGCTACAGCTCTA
AATGTTTTGTACGGTCTCTTTCAGCACTTTTCTGTGGCGGACATGTAGCA
GATGACAATGCACTCTGGTGTATGTACCAGGAAAAAGTGTACACAACAAT
GTCAGGACTGGCTATCGGGCCCATAAAAACGGCACTTGATTTTTCCCTCG
TTTTCGTGGCCATCTATATACCGGTTCCGAAAGAATGAGCGTTGTTTTTT
TATCAACAAGTGGTGGACCGCAAGCTGGTCTTCATTTTTATCCCTGACGG
CTTATATGCCTGGATTGGATGTCTTATTCGTTGATTTAGTTTGAGAAGCC
CAGGAACATAATCTTGTCGTTTAGAGGCTTGACGACCAACGAGGGTTAAC
CGGCCGTTATTCTACCTCGGGTATCCCATGATGTCCGCAGACACGAGAAA
AGGATCGAAGATGGGTGTCTTGGTGCTGGAAGCTGCCGGTACTTGATTAT
TATTGGTAATAGCATTTCGCTGCAGTGAAAATGTGGGGGTAGTGATTGGG
CATCCCCTGGTCACCCTGGGAATATGTGCTCATCGCCCCTCCCCTGGCAT
CAAAGTTTCATGTAAATACAGAGTGATTCGTCTGAAGCAAAGGCAATTTT
TAACGTATTTTTTATTAAAATTTATTTTGATGTTGAAGATGCTCGCCTCT
GATGCTGTTCTCTTTCTGTTCTCGCCTGTATCTTTCCATTGCAGACTCGT
CAATGGTCCAGCCTCGAGCTAATCGCTAGTGAGAACTTCACATCCAGGGC
TGTCATGGACTGCCTAGGCTCTGCTCTCACCAACAAGGTATAATCAGTGA
TGAAGTTTGGAATATCGTGCTTTCTGTAAAACATCACTGAATTTTCAGTT
TTTTTAGTCTAATAATTTGCCCCGTGGACGATTCATCACTACAACCAGCA
TTTTTTAGGCATACCTTTGGTTTTATCCGAAATCCTACACAGCATGTGTT
TTGGCCCGAGGGCTCGAAGGATACGTTTTTGTTGCCGCCACGCTAATTCG
AAAAGTCATGACCGATTCGTGACAGTGTGGACACCGGAGGCTCTGTCGGA
ACAAGATAACGGGTTTTAACAATAATGTCGACAGAGAGTGCTCCAGTCTT
CGTTCTCAGTAGAATCATTCCAACTGCCTGTCTTGATTGGATGTATTGTC
TTTCCGATACGGGTTGTCTGAAGATAGGTGCTGTTTTTTCGTTATTTTCT
TCGAGTGAAGATTGGATTTTGTGGGGGAACGGCGCGTGTAGGCCTCAATA
TTTATTAGTGTACTATTTGGTGGGTGTTACACTCTATATCTTTGGGTGTT
TGGATTATGTATGTCTAACTTGCGTTGGTTGAATTACAGTGCAGTTGCCA
TTTGGAGCATTTCCAATATGTTGTAAAAATGCCTCAAAACATGGCCGAAA
TAGTCTTGAACCTTACCGTACGAGCCATTTCGGACAATCTTCGTCTCAAG
TATATTTCACTCCCTGCTAAAACACTTCAATTCCATCTTTTCGATCTGAT
CTGTTTGATCTGTTTCAGTACGCAGAAGGACTTCCCGGAGCTCGCTACTA
CGGAGGTAACCAAGTCGTGGACCGGATCGAAAGTCTCTGCCAAGCTCGTG
CCCTCGAAGCCTACGGCCTGGACCCGGAGAGATGGGGCGTAAATGTACAA
CCCTACAGCGGATCGCCCGCCAACTTCGCTGTCTACACCGGACTGCTCAG
ACCGCACGACCGCATTATGGGGCTAGATCTTCCCTCCGGTGGGCACCTTA
CACACGGCTTCTACACGTACTCCAAGAAAGAGGGCACCAGAAAGGCAGTG
TCGGCCACTTCTGTTTACTTCGAGTCTCTGCCGTACAGAGTCGACCCGGA
CACGGGAATCATCGACTATAAGGACCTGGCGAGGCTTGCGGGTCTTTTCA
AGCCTGCCATGATCGTGTGTGGCGGTTCGGCGTACCCCCGCGACTGGGAC
TACGGCAAATTCAGGGAGATTGCGGATGCCAACGGGGCCTTACTTTTGTG
GTGCGTATGGCTGTGGGTGTAGTGGTGTTTGTGTCGGGGTGGGTGGGGGG
GTGTTGATGAGGGCCCTTGATTAGTTGTTTTGAATCTGATGGATATCAGC
TACAGCAGTGAGTTTGTTTTTGTCCCGATGGTAGGTGTGTGTATGCTTGA
TGTGGTTTTATTTCGTTTTTGAATGAATATACACCAACTACTCGACGCAT
GTTTGTTTGTTTTGCCTTTCGATATACGGTGGCGATACTAGTTACGTCAT
GTTAGAATGCTCCGCCTGTGCCGTTCCACGTTTTTTTTTTTTTTCTGTTT
AGACCCACGCTTGACGGTTTGGTGAGGTAGGAAAGAATGTGGGAACTGAT
TTCTTCGAACATTTGCTGGACAAAAGGCTCATGTGTGTGGATATTAATTT
CAAGAGCTCTTATGCAAATGACTGTCTCCACCTTGGCGGGTTGACGAAAA
GGCGAAGAACGTTTTATCCACCTAACTGAAATGAAACCTGGAATATTCTG
AAACCCCACAATCATCTTACTCTTTTCAATATATTGGTGCTACCCCAGAA
AATTGGACGGTAGTTTATCCTTCTCATTTCTTTTTGTTTGGAATTCCCAC
GCTCCTCCGGATATGTCTTCTGTTGCCTGGGGACAAACAGCGATATGGCG
CACATCTCCGGTCTGGTGGTGACGAAAGAAGCTGCCAGTCCTTTCGACCT
GTGCGATGTCGTTACGACGACGACGCACAAGTCACTGCGAGGGCCGCGGG
CAGGGCTCATCTTCTACCGCAAGGTACACTGGATAAGTACTAGACGCACG
GAAACGGAATGATGATGTGGTTCACCGTTAGCCGTATTTACCGCAATTTG
TCATTTAATCGTCCCCCTGTTTTTTGTTTTTTGGTTGTCGTCTGGTCTTC
TTTTCGCACGTGTGTTTTGTTCTTGAGTCCCCAACGCCTCTTTTGGTCCA
GCAGACATTAGCTCACTGCAACTGTGAACGTTGTGAGAGGAACACCGGGT
TGTTTTTTCGAGATCCACAAGCCTTGACTGTCGTCACATCCTATTCACAA
AATGACGTACTTGCAAGCATGTCTTGATGGCGTTTCTATCTGTCCAACGA
TGCTTTTGCACAAGAATGTGTTTTAAGCAGGGATCTATCGCATCGACTGC
GTCCGTTGTTTCTGGATACATTTAGGCTCAAGTGTTATTTCGCTTTCAAG
TGGTGGTTTCTCCGACACTCGATGCAATGTGTCGTTCGGTACTGTTGAGA
TGGCGAGTATCTCCTGGTGCAACATAGTATACACTAACGCTGACACTAGA
TAAAATTGCGGGGAGTTTCCGCTGCACAATTTTGTCGTACCGACCTGTGA
AATTGTTTTCTGTTCCACTTATTAATCAAGTGTTTTGCACGACGAGGTGA
CGGTTGATATACGAGAATTGACACAGTATTTTCTGATTGCGAGTCTGAGA
CGTTAGACTTGAGTGTTGAATTAAAAAAACGGTGGTAGTGCCCGCACGAT
TTTTGCAAGGCCTGCTTATCATCCTTTGACAGTAAGTATGGGCCTGACTC
TTTGTAATCTCTCCCGTCCTTTTCTCCTCTTGAGCGTGTAACCTTTCATG
TCTAACCGCCTTTTTTTTTCGGGTCCACAGGATGAACGTGACTTCGGCAC
GAAGATCAACAACGCGGTGTTCCCTGCCCTCCAAGGTGGGCCCCATGAGC
ACCAGATCGCTGGGGTTGCCACCCAGCTGCTGGAGGCTATGACTCCGGAG
TTCAAGGAATACACCGTCCAGGTGAGACGGAGGTTACTCCTTACCAGGGT
GTTGACACACTACTTATTCTCTGTAAGCATGGTATTTTTCGAAGATGTGC
TGGGACACTAGTGGACTTGAATTGTGTCAAGAAAAAGATGTATTTTTCGA
TTTAATTTTTTTTATTTTATGGGTTGGGGTGTACAGTCAGCAGAACTGTA
TGAGCTAAGATTTTTTTTCAGGGTATTCTTGACGAAATGGTATATGTGCA
TCATTGTAGTCGTTCGATTGCGATGTGGCGGTTACCGGGTTGTTTTTCTT
TTGCTTGAATACATTTGTCGTTTCATCTTCTAACGTGCACCCGCACGTGC
TGTCCTGGCTGACGTCAGTGGGCTCGACACTGATGCCCTGTACAGTGCCT
GGACTGGATCATGATCTAACATGAGTACGACGGACCAGGATTTGAAATAC
AAATGTCATATTCACTGTACTGTCGCGTCGGGTGCATGTTCGCTTGTGTG
TCAGGTCAAGAAAAATGCGGCGGCTTGCGCTGACCACCTGGTCAAGAAGG
GTTACACCATCTGCACAGGAGGAACCGAGAATCACTTGCTGCTCTGGTGA
GCTTTTATTATTTTTTTTATTTTGGCTCTCTTGAACAACTTTGTATTGGT
CGCTGCCAAGAATATGTTGTATTTTCATTTTTTGTATGTGTTCTGATTGC
AATATCAAACAGTGTTGGTTTGTATGTTTTGTCTTTTTTATCGTCGTTTG
TTTGTGAGGCGTTACGCCGCCGTCGCGATGTTTTCAAATGAACAAACTTG
ACCATTTTCAAACTCTTGATGTGATCAGGCTCGGAGGCATGCTGATGCTT
TTTACGAGAAAACTATGAACGGTTGGATATTTGTAGAGTTTGACTCTGGA
CAGGCCGTGGGTATAGCTCTGTGGTTGCAGACAGACACGTCTCAGTTACG
GTTCCGACGTACGACTGTATTCTATCCCCGCCTTGTTAAAGGGCATGGAA
TTTCCATCCATTGTAAGTGACAGTCGAGCGAGCACTGCTAGTTTCCGTCT
TGGCTTGAACAATTAGTAACTTCTAAGCAGACTCCGGCTTGAGGATATAT
GTGTAAGTAGAGTGCGAGGAGCATCCCCGTAAGGGACGACTAACATACAA
GTGATGAGAGACAAAGGTGTTGTCTGCTTTGCTTCTTGTGTATTGGTGAC
GCGTAGCGGCCAAGCTTGTAATAGTCTTGCTGCTGTAGGCGCTCCGACAA
GTGAGCCTTTCGCGAGAAGTCGACGATAGAGACAAGAGACCTGGGGATTG
AGTTTCCTGGGTAGAAATATTTGACTTCTCCAAAACTTTGTTTCATTGTT
TGAGTTTTTAAAAAGTAACAAAGTTCAAGTTATTTACTAACAGTATTATT
TTATTTGAATATTTTTTTGGTTTTGGACCGAAAGAGACTCCTCTACTCTT
GTAATCCAAGTTTGGATGAGGGCTCGCACTGGTTAGACGTAAAATTAACT
TGGTCACAACCCTGCCAGCTAGTCCAAAGCACCATCGTTTCACCATCTCC
CTGGTCCTCAACGGTGGACGTGACCACGTCTTCGTGGGGAAATGGCTCCT
GCACCTGGCGATAGGAAATGACTTGAGTTGGGATCGAAGACGACGAAAAA
ACCGGAAATTGAAGTGTCTCTGGCGCATGACATGTATCTCTGATGTTTAA
CTTCCTGTTTCGATCTCTTGATCCGGCAGGGATCTTCGCCCCCAGGCGTT
GACCGGATCAAAGATGGAGAAGATCTGCGACAAGGTGCACATCACCCTCA
ACAAGAACGCCGTGCAGGTATGATGTGTGTATGTGCAATGTGGTGATGGA
CACTCAAACGCCGACGTCATGTAGGTTGAAAAGCAATTAACACAACCCCC
CCGGAGGTTACCCTACTTATTCACTGAAGGTGAAGGCGGGTCAACACGAC
CACAAAATATGCAAGTGATGAAAAGTGACTATTTCAGCTAGCCTTGAGCT
ATCCTGTCGCTCCAGCATCATGGATCAGCAGTCTGAGTAGTGAATTTGTG
TAGGTGTTGTACACTCGGAAGTACGGATTGTGTAGGTGTGAAAAGAGCTT
TGTCCATGTGTCGTTGCCGCATACCGCGGTTGTTGCTGATCTTGTTCGTA
CAGTATATCCAAGAAGTGGAAAGATTATACATTTTCACTTTTAGGGTCAA
AATGCCTGAGTTTTCCAATTCATCTTGGGTTGACAATTTTGTTTGATAGT
ATCGATGTGCCTTTTCGCCTGGTCTGTGAAAATTGTCATGTATCACGGAA
GCGCCACTGCTATGTCTGTCCAGTTCACGCTCTTGTCTGCTGACCCCTAC
GCGATATATATTGCTGTTGCTGTCACTAGTACGGACAACATCCTCCAAAT
TACCTGAGTAGTGCTGCGCTTGTCGCGTTAACCGATAGGGATTATTTCGT
TGGCCCCCAACACTTTCAATTATTTATTTTGAGAAGCGTTTTTCGCGTGT
TTGTATTTGTATTGCCTAGGGGGACAGATCCGCGGTAAGCCCTGGAGGTG
TCCGCGTCGGTACTCCTGCGCTCACCACTCGCGGCATGAAGGAGGCTGAG
TTCCGCATGATCGCCGACTTCATGGACCGTGCTGCCCAGCTTGCTCTCAA
GACTCAGAAGACGACGGGGAAGATGCTGAAGGATTTCGTCCTCGCCATCG
AGGTAGGGGTCTGCTGCAGGCGGCACTCCTTCTTTGAGTGCACGCTACCG
GTCTACAGATATACATGATGAGTATGTGAAGCCTGATGAAACGCACACGA
GTTGTCAAAGATGTGGTTAACATACGGAAACCAACACTCCAAAGTGGCTT
GCAATGCTGGACCGGAGAGCCTGATGCCAGTTTTTGCGGCGCTTTTTGGG
TAATATAAACAATACGTGAAATCTCGAAACATAGTATAAATTATGATGCT
TGTGTGTGCTCTCCCGCATGTTGCATCCTCGAAGTATTTCCCACATATTT
CGGCAGTGACAGCATTTTTGAACCGAAGGTTGTGTAGTGTAGTATACAGG
CTGAAGCACCGTGTCGATATATCTTCCTGATCGACCCCCCCCCCCCTGTT
GAGAGCAAATTATGGATACATACTGAGTGAGGTTATCACCATCTCTATAC
TCCAGAACCATAATTGGAAACACTTGAATTTTTTTCGAAGTTGTTGGGGG
AAACGAAAAGGTCTTGCTATTATAATACTACGACAGACAATGTTGCCCTT
GCCCGTGCATAAATAAGTGTTTGAAGTAGTCGAAACTTATGTTCCCCCGA
CCGTTCTGTGTCTTTTCTCGGCGGATCTTCCTTCAGAACGATGAGGAAGT
CAAGGCGCTGGGAGATGAGGTGATTGCGTTCGCGCAAAAGTGGCCCATGC
CCGGATTTGAAGCTTCTGAACTGAAGTTCAAGGAAATGAACCACTAAGAT
TGTTGAACCACCAAGCTCGAGCGTCCCCATCCATGTTGTGATATCAGCAT
AAATCGCCAGGATTCATCACAGTGTTGTGCTGGTGTTGCAGCGCCCAAAT
GAAGCGAGTGATTCAGTGGTTTTTGTTTTTGGTCGTGGTAGGGTGTGATT
GTCAGATAGCAAACGGTAAGGTCAATTGATCGGGGACGACTTGTAAGTGT
GTTGGAGAGGAGATCGCTTCCCCCCTGTTGCTGTGTTGTAATCCTCGCAT
CCCATCTTTGATTTCGTGCCACGGTGGAAAGTGCGATGTTGTCGAGCCTA
ATGACTTGTAGGTGGGTAGCCCGGAGGTTTGACGTGTGTAATGTTTGAGT
ATTGTTTAACTACGAGCACCTGTATCTGGAGTATTCCGTCTCCCCTCGGT
GCTACAATGCAGTCCGCCTTATCTCAAGCAGCTTGGTAAGAAGCAAGTCC
CATGAGAAGGGATGGACGTGTATGTGGCTAGTGGGCAGGGGGATTGTACG
AGGGGTGAATCTCCAAGTGTAGATGGGGATGAACGAAGCACCTCGTTACA
ACGAAGATACCGCCACAATGCCATGCCACACCGTTACAGGCAATTCCTTG
CCGTGTTTTATTTTCTCGTGGTGCTTTTTGGCCGTGCATCGGACTCCAGT
CTGTGTGGAACGTAGTGTGTTTTTATGTTCAATTGTTTGTTTTGCCGTCT
TTTTTGTTGCCTGCCTAAGACGTTTGTGGTATGATCATGGCTATTTTGAT
TAGTCACTCGTGATGTTTAGGGGATCGGAGGAAGTAAGAGCGAATAATCT
AATGAAAGCTATACATACCAGTACGAACTGGGACCCATTACCGCAAGGGT
TACCTGGGAAGGTGCAACGGGCAACATAGAGAAGCAAACTGCGAAACCCA
GCCGTGGTGACTTTTCGTGTGAATGGAAGAAAAACGGAGTGAAGATATGA
AATAGCGGTAGATGTTCCGAGAAGACACTACAAGAGAGGAAAATGGCGCT
CGTGTGTTCCTCCTCTGGCCGTTGAACTTTTAATGGAGGAATTCGATCAG
TCGGAGAACCATGCTTCGCGTGTGACGTCTCGCATGGTCGTAACGTCAAT
TTAAAAAGAAAGAGACCATCCTTGAAATTTAGGATCTATCTTCTAATAGA
TGAAGCATCTAGGGTATTACGTTGGTTGACATGCCAAACGCACGAAACAG
AGGAACGGGGGATCGTGCTCCTCTTCATTAGCTGTCAAACACACACGTTT
CTGGTTGAATTGGATAAGCCAATCCCAAGGTAACGCGAAATCCAGATTAA
CCGAGGAATAACACTCATCTGTAC

Coding sequence (CDS) from alignment at H-paniculata_contig1672:1084..11407-

>mRNA_H-paniculata_contig1672.3793.1 ID=mRNA_H-paniculata_contig1672.3793.1|Name=mRNA_H-paniculata_contig1672.3793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2826bp|location=Sequence derived from alignment at H-paniculata_contig1672:1084..11407- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACTGATATTCCGTCTACACTGCCTGGGAACGTCGCCCTCGAGCA
GCATGATCCGGTGTTGTTTGACCTCATCGAGAAAGAGAAGATGTCGACTG
ATATTCCGTCTACACTGCCTGGGAACGTCGCCCTCGAGCAGCATGATCCG
GTGTTGTTTGACCTCATCGAGAAAGAGAAGACTCGTCAATGGTCCAGCCT
CGAGCTAATCGCTAGTGAGAACTTCACATCCAGGGCTGTCATGGACTGCC
TAGGCTCTGCTCTCACCAACAAGACTCGTCAATGGTCCAGCCTCGAGCTA
ATCGCTAGTGAGAACTTCACATCCAGGGCTGTCATGGACTGCCTAGGCTC
TGCTCTCACCAACAAGTACGCAGAAGGACTTCCCGGAGCTCGCTACTACG
GAGGTAACCAAGTCGTGGACCGGATCGAAAGTCTCTGCCAAGCTCGTGCC
CTCGAAGCCTACGGCCTGGACCCGGAGAGATGGGGCGTAAATGTACAACC
CTACAGCGGATCGCCCGCCAACTTCGCTGTCTACACCGGACTGCTCAGAC
CGCACGACCGCATTATGGGGCTAGATCTTCCCTCCGGTGGGCACCTTACA
CACGGCTTCTACACGTACTCCAAGAAAGAGGGCACCAGAAAGGCAGTGTC
GGCCACTTCTGTTTACTTCGAGTCTCTGCCGTACAGAGTCGACCCGGACA
CGGGAATCATCGACTATAAGGACCTGGCGAGGCTTGCGGGTCTTTTCAAG
CCTGCCATGATCGTGTGTGGCGGTTCGGCGTACCCCCGCGACTGGGACTA
CGGCAAATTCAGGGAGATTGCGGATGCCAACGGGGCCTTACTTTTGTGTA
CGCAGAAGGACTTCCCGGAGCTCGCTACTACGGAGGTAACCAAGTCGTGG
ACCGGATCGAAAGTCTCTGCCAAGCTCGTGCCCTCGAAGCCTACGGCCTG
GACCCGGAGAGATGGGGCGTAAATGTACAACCCTACAGCGGATCGCCCGC
CAACTTCGCTGTCTACACCGGACTGCTCAGACCGCACGACCGCATTATGG
GGCTAGATCTTCCCTCCGGTGGGCACCTTACACACGGCTTCTACACGTAC
TCCAAGAAAGAGGGCACCAGAAAGGCAGTGTCGGCCACTTCTGTTTACTT
CGAGTCTCTGCCGTACAGAGTCGACCCGGACACGGGAATCATCGACTATA
AGGACCTGGCGAGGCTTGCGGGTCTTTTCAAGCCTGCCATGATCGTGTGT
GGCGGTTCGGCGTACCCCCGCGACTGGGACTACGGCAAATTCAGGGAGAT
TGCGGATGCCAACGGGGCCTTACTTTTGTGCGATATGGCGCACATCTCCG
GTCTGGTGGTGACGAAAGAAGCTGCCAGTCCTTTCGACCTGTGCGATGTC
GTTACGACGACGACGCACAAGTCACTGCGAGGGCCGCGGGCAGGGCTCAT
CTTCTACCGCAAGCGATATGGCGCACATCTCCGGTCTGGTGGTGACGAAA
GAAGCTGCCAGTCCTTTCGACCTGTGCGATGTCGTTACGACGACGACGCA
CAAGTCACTGCGAGGGCCGCGGGCAGGGCTCATCTTCTACCGCAAGGATG
AACGTGACTTCGGCACGAAGATCAACAACGCGGTGTTCCCTGCCCTCCAA
GGTGGGCCCCATGAGCACCAGATCGCTGGGGTTGCCACCCAGCTGCTGGA
GGCTATGACTCCGGAGTTCAAGGAATACACCGTCCAGGATGAACGTGACT
TCGGCACGAAGATCAACAACGCGGTGTTCCCTGCCCTCCAAGGTGGGCCC
CATGAGCACCAGATCGCTGGGGTTGCCACCCAGCTGCTGGAGGCTATGAC
TCCGGAGTTCAAGGAATACACCGTCCAGGTCAAGAAAAATGCGGCGGCTT
GCGCTGACCACCTGGTCAAGAAGGGTTACACCATCTGCACAGGAGGAACC
GAGAATCACTTGCTGCTCTGGTCAAGAAAAATGCGGCGGCTTGCGCTGAC
CACCTGGTCAAGAAGGGTTACACCATCTGCACAGGAGGAACCGAGAATCA
CTTGCTGCTCTGGGATCTTCGCCCCCAGGCGTTGACCGGATCAAAGATGG
AGAAGATCTGCGACAAGGTGCACATCACCCTCAACAAGAACGCCGTGCAG
GGATCTTCGCCCCCAGGCGTTGACCGGATCAAAGATGGAGAAGATCTGCG
ACAAGGTGCACATCACCCTCAACAAGAACGCCGTGCAGGGGGACAGATCC
GCGGTAAGCCCTGGAGGTGTCCGCGTCGGTACTCCTGCGCTCACCACTCG
CGGCATGAAGGAGGCTGAGTTCCGCATGATCGCCGACTTCATGGACCGTG
CTGCCCAGCTTGCTCTCAAGACTCAGAAGACGACGGGGAAGATGCTGAAG
GATTTCGTCCTCGCCATCGAGGGGGACAGATCCGCGGTAAGCCCTGGAGG
TGTCCGCGTCGGTACTCCTGCGCTCACCACTCGCGGCATGAAGGAGGCTG
AGTTCCGCATGATCGCCGACTTCATGGACCGTGCTGCCCAGCTTGCTCTC
AAGACTCAGAAGACGACGGGGAAGATGCTGAAGGATTTCGTCCTCGCCAT
CGAGAACGATGAGGAAGTCAAGGCGCTGGGAGATGAGGTGATTGCGTTCG
CGCAAAAGTGGCCCATGCCCGGATTTGAAGCTTCTGAACTGAAGTTCAAG
GAAATGAACCACTAAAACGATGAGGAAGTCAAGGCGCTGGGAGATGAGGT
GATTGCGTTCGCGCAAAAGTGGCCCATGCCCGGATTTGAAGCTTCTGAAC
TGAAGTTCAAGGAAATGAACCACTAA