prot_H-paniculata_contig16708.3789.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16708.3789.1
Unique Nameprot_H-paniculata_contig16708.3789.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
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BLAST of mRNA_H-paniculata_contig16708.3789.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.050e-39
Identity = 119/215 (55.35%), Postives = 140/215 (65.12%), Query Frame = 0 
Query:   24 GVSMPRRSGRQSDLLLEVEALEPQQLMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAHGLGLG--------------GXXXXXXXXXXXXXXXXXXTASAESLDLLSQRSLEEELYLLLPVLLSYAPRIKMREASAALMRTRFAPSLLHVSVMNDPLSLESIVLGVCDA--ATPTGNPPRTPRHVAQRAYELLLELCKLGQITAFRVRALLVS 222
            G S+ RR G+Q DLLLEVE+LEP+QLMS                            S A G+G                 XXXXXXXXX   XXXXXX  S+ESLDLLSQRSLEEEL++LLPVLL++APR++MRE+SAAL+RTRFAPSLLHVS MNDPLSLESIVLGVCDA  ATP     RT   V++RA EL++ LC LG I + +VR +L S
Sbjct:  236 GGSVSRRDGKQMDLLLEVESLEPKQLMSSGGRQSPSRGVVSRAS------------SPAVGVGAAXXXXXXXXXXXXVEAXXXXXXXXXAVGXXXXXXXXSSESLDLLSQRSLEEELHMLLPVLLAHAPRVRMRESSAALLRTRFAPSLLHVSAMNDPLSLESIVLGVCDAVAATPGITATRTSHRVSRRAEELVMRLCGLGAIASVKVRQVLRS 438
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16708.3789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZF6_ECTSI1.050e-3955.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16708contigH-paniculata_contig16708:1199..4823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16708.3789.1mRNA_H-paniculata_contig16708.3789.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16708 1186..4823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16708.3789.1 ID=prot_H-paniculata_contig16708.3789.1|Name=mRNA_H-paniculata_contig16708.3789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MDGGGEGGDGKDAGEKGGGGNNGGVSMPRRSGRQSDLLLEVEALEPQQLM
SGGSGGGIFDQSQSSSTPRNQLGGGGGTSSAAHGLGLGGGVAGGIGDGGW
EGGSGGGTASAESLDLLSQRSLEEELYLLLPVLLSYAPRIKMREASAALM
RTRFAPSLLHVSVMNDPLSLESIVLGVCDAATPTGNPPRTPRHVAQRAYE
LLLELCKLGQITAFRVRALLVSER
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