prot_H-paniculata_contig167.3781.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig167.3781.1
Unique Nameprot_H-paniculata_contig167.3781.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
BLAST of mRNA_H-paniculata_contig167.3781.1 vs. uniprot
Match: D7FLT8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT8_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.620e-24
Identity = 56/103 (54.37%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 MVSTFSRSVVAGGRSSLMRVAASRFGRVSIATTKRNMGLKTNPHVEEWMGKREITEKTFKFTPQISFSLLIGIGVFPYWVHHNIKEGMEYTDVKKFGSKREYF 103
            M S   R++  G R      A  R G V+     R  GLKTNPHVEEWMGKREI+EKTF FTP++S  LL+ I VFP  V+ NIK GME  D K+ G KREYF
Sbjct:    1 MSSALGRALSVGARGFPAAGAGRRVGEVAA----RGRGLKTNPHVEEWMGKREISEKTFTFTPKVSLGLLMAIVVFPVVVYGNIKAGMETKDAKE-GRKREYF 98          
BLAST of mRNA_H-paniculata_contig167.3781.1 vs. uniprot
Match: A0A7S3UZX4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZX4_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 1.120e-11
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   38 GLKTNPHVEEWMGKREITEKTFKFTPQISFSLLIGIGVFPYWVHHNIKEGMEYTDVKKFGSKREY 102
            GLK N  VEEW GKREITE+TF +T Q + SLL+ +GVFP +V+   K  +E  D  K G +REY
Sbjct:   40 GLKKNAFVEEWNGKREITEQTFTYTGQTTRSLLMWMGVFPAFVYVMTKGELEKRDASK-GKRREY 103          
BLAST of mRNA_H-paniculata_contig167.3781.1 vs. uniprot
Match: K0QZK4_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZK4_THAOC)

HSP 1 Score: 50.4 bits (119), Expect = 3.910e-5
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   37 MGLKTNPHVEEWMGKREITEKTFKFTPQISFSLLIGIGVFPYWVHHNIKEGM 88
            M +K NP+VEEW G+REITEK F+ T      L++    FPY ++H  ++ M
Sbjct:  154 MHVKKNPYVEEWNGRREITEKAFEVTQDNLLPLILMCVAFPYGIYHFTRKEM 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig167.3781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLT8_ECTSI3.620e-2454.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UZX4_HETAK1.120e-1153.85Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
K0QZK4_THAOC3.910e-544.23Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..60
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig167contigH-paniculata_contig167:10654..13929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig167.3781.1mRNA_H-paniculata_contig167.3781.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig167 10654..13929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig167.3781.1 ID=prot_H-paniculata_contig167.3781.1|Name=mRNA_H-paniculata_contig167.3781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MVSTFSRSVVAGGRSSLMRVAASRFGRVSIATTKRNMGLKTNPHVEEWMG
KREITEKTFKFTPQISFSLLIGIGVFPYWVHHNIKEGMEYTDVKKFGSKR
EYF*
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