mRNA_H-paniculata_contig1668.3774.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1668.3774.1
Unique NamemRNA_H-paniculata_contig1668.3774.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A6H5KYA6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 7.430e-153
Identity = 227/326 (69.63%), Postives = 273/326 (83.74%), Query Frame = 1
Query:  460 LVRGGATGRSAPVVQQPKKTPAARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYARTK 1437
            L  G AT  +A      +KT   +V FYL VWYS TIGYN+YNKATLNR++ PW LSTVQLA+G++YV  IW  G+RKAPKL+G+N++AV+PLA LHTT+HIAAVV LS GA+G+ QIVKAGEPLFTALF+AL LG++FA PVYA LLPVVGGVA+AS+KELSF W+ FGGAMT+N++ A+RGVLAK SMD PKGENMDAGNLYGVMTI+AT+M+ PFA +VEG + +GL+  A+AAGHTK ++ KG +LS +FFYMYNEVAFYCL+AIHPVTHAVANT+KRVFLIA SI+VFGH+LTP+G  GS VAI GVLLYSLAKQK+   K
Sbjct:   85 LNSGDATASAAGAAPAKEKTSTLKVGFYLFVWYSLTIGYNIYNKATLNRMNIPWILSTVQLAVGAVYVSLIWALGVRKAPKLSGENLKAVLPLAALHTTSHIAAVVGLSAGAIGFVQIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKELSFTWLAFGGAMTSNVAAASRGVLAKASMDKPKGENMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYDTAIAAGHTKKTLAKGALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLTPLGSIGSAVAIAGVLLYSLAKQKFPNKK 410          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A835ZDI5_9STRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA)

HSP 1 Score: 362 bits (930), Expect = 1.570e-116
Identity = 183/316 (57.91%), Postives = 234/316 (74.05%), Query Frame = 1
Query:  487 SAPVVQQP-KKTPAARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYAR 1431
            +AP    P +K    +V  Y  +WY   IGYN+ NKATLNR++ PW +S+VQL IGS+Y+  +W   +RKAPKL+  N++ V PLA LHTT+HI+AV+ L  GA+G+  +VKA EPLFTA  +ALLL +    PVYA+LLPVVGGVA+ASMKELSF+W+ F GAM +N++ A RGVLAK  M   +  NMD GNLYGVMT++A  ++ P ALVVEGP+ + +WAAA AAGHT  +I +G ILS L+FY+YNEVAFYCLN+I   THAV NT+KRV L+  S++VFGHQLTP+G  GS VAI GVL+YSL K  YA+
Sbjct:    5 AAPATDGPAQKAKRLKVLGYFVLWYLLNIGYNISNKATLNRVALPWLVSSVQLVIGSMYIALVWGLKLRKAPKLSKANLKTVFPLAALHTTSHISAVIGLGAGAVGFVHVVKALEPLFTAALSALLLQKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPNMDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSLTKNHYAK 320          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 324 bits (830), Expect = 1.480e-101
Identity = 155/297 (52.19%), Postives = 219/297 (73.74%), Query Frame = 1
Query:  529 RVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQ 1419
            +V F   VWY+F I YN+ NK  LN +  PWT++ VQL +G LY+  +W+S +RKAPKL+ +NI+A++P+A++H   H+  V++L  GA+ +  IVKA EP F+ + +A+     F  PVY  LLPVVGGV +AS+ ELSF+W+ F  AM +N + + R + +K +M+ P+GENM A NLYGV+TIM+ LM+ PFALV+EG K +G WAAA+AAGHT   ++K +++S LF+Y+YNEVAF CL+ +HP+THAV NT+KRV +I AS++VFG ++TP+   GS +AI GVLLYSLAKQ
Sbjct:   71 KVGFLFGVWYAFNIVYNISNKKILNALPFPWTMAVVQLGVGLLYLLPLWMSPLRKAPKLSSENIKALMPIALMHGIGHLCTVISLGAGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAKQ 367          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A836CHH7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.000e-100
Identity = 166/332 (50.00%), Postives = 234/332 (70.48%), Query Frame = 1
Query:  463 VRGGATGRSAPVVQQP--KKTPA-----ARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYARTK 1437
            VRGG T   A   + P  K+T +      R+  Y  +WYS  +GYN +NK TLN ++AP TLS +QL +G +YV  +WL  +R AP L+  NI+ + P+ + H  +H++AV+ L  G++ +  IVKA EP FTALF+A+ L + F  PVY +L+PVV GVA+AS+KEL+F+W    GAM +N++ ++R +LAK SM  PKG NM A NLYGV+TI+AT M+ P A V+EGPKF   W AA+  G+++ +I K  +LS L+FY+YNEVAF  L+A+HPV HAV NTLKRVF+IA+ +I+FG+++TP+G  GS +AIVGVL++SL K+ Y+R K
Sbjct:   56 VRGG-TASVAKTAKSPVMKRTESNLKYNLRIGMYFFLWYSLNVGYNYHNKKTLNMLAAPLTLSALQLVVGVVYVSLLWLLRLRAAPGLSMDNIKTLSPIGLCHAISHLSAVIGLGAGSVSFTHIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPKGTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSLVKEYYSRKK 386          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A6H5KC08_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC08_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.470e-99
Identity = 159/324 (49.07%), Postives = 217/324 (66.98%), Query Frame = 1
Query:  460 LVRGGATGRSAPVVQQPKKTPAARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYAR 1431
            + RGG  G + P    PKK+    V  Y  +WY+  IGYN+ NK  LN I+ PW++S +QL +GS++V  +W+  +R AP L   N++ + P+A  H  +H+ AV+ L  GA+ +  IVKA EPLFTALF+A+ LG++F+  VY TL+PVV GVA+AS+KEL F W   GGAM +N++ + R +L+K SM M  G+NM   NLY V+TIMA+ M+ P + +VEGPK + LW + +        I+  T+ S +FFY+YNEVAF CL  +HPVTHAV NT KRVFLIA SIIVF  +LTP+   GS +AI GVLLYSL K+  A+
Sbjct:   66 ITRGGGRGAAPPA---PKKSQTIIVGIYFFLWYALNIGYNITNKKALNAIALPWSISVLQLVVGSIFVLPLWMLKLRDAPGLTMANVKGLSPIAACHMLSHVCAVIGLGAGAVSFVHIVKAAEPLFTALFSAIFLGQIFSPLVYLTLVPVVAGVALASLKELDFKWAALGGAMGSNLAASTRAILSKRSMGMDMGKNMSPANLYAVLTIMASAMLLPLSAIVEGPKIQELWESTVTTPEKGNEIIYNTVASGVFFYLYNEVAFRCLGVVHPVTHAVGNTFKRVFLIATSIIVFKSKLTPLAAMGSFMAIAGVLLYSLTKEWCAK 386          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A7R9YBK2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK2_9STRA)

HSP 1 Score: 315 bits (808), Expect = 4.470e-98
Identity = 158/304 (51.97%), Postives = 218/304 (71.71%), Query Frame = 1
Query:  529 RVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYARTKE 1440
            +V    A+WY   IGYN+YNK  LN +  P+T++ VQLA G L    +W+SGIRKAPKL+ +N++ + PLA LHT AH+ AV++L  GA+ +  IVKA EP F+ALF A+L+G+VFA PVY TL+PV+ GVAVASMKEL+F+W++FG AM +N   A RG+ AK +M  P+GENM++ NLY V+T     ++TP AL++EG K    W AA+AA  ++  ++   +LS L++Y YNEVAF  L+ +HP+THAV NT+KRV +I AS+IVFG  +TP   AGS VAI+G L+Y+LAK  Y + K+
Sbjct:   82 KVGGAFALWYILNIGYNIYNKKVLNALPLPYTMAAVQLAAGLLIFVPLWVSGIRKAPKLSRENLKNLFPLASLHTGAHLTAVLSLGAGAVSFTHIVKAAEPAFSALFAAVLMGQVFAAPVYLTLIPVIAGVAVASMKELAFSWVSFGNAMGSNTFSALRGIYAKKNMGNPQGENMNSANLYAVLTCFGIALLTPIALILEGGKMGAAWTAAVAAYGSQQLLLWHALLSGLYYYSYNEVAFLALSQVHPITHAVGNTIKRVVVIIASVIVFGTTMTPTAIAGSSVAILGTLMYALAKNYYQKKKD 385          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A6U4KWF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KWF3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 6.140e-98
Identity = 171/347 (49.28%), Postives = 225/347 (64.84%), Query Frame = 1
Query:  385 KSTALSSASSPGRADEKDPEAAPEQLVRGGATGRSAPVVQQPKKTPAARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKY 1425
            KS    S S P     K+ E AP  +         A   ++ K     +V  Y A+WY   IGYN+YNK  LN    PWT++ +QLA G L    +W +G+RKAPKL+  N++ ++PLA +HT AH  AV++L  GA+ +  IVKA EP F+ALF AL LG+VFA PVYA L+PV+GGVAVASMKELSF+W++FG AM +N   A RG+ AK +M  P GENM+A NLY V+T M   ++ P AL+ EG K+   WAA +AA   K  + K  + S LF+Y+YNEVAF  L+ ++PVTHAV NT+KRV +I AS++VFG Q+TP   AGS VAI G L Y+LAK  +
Sbjct:   49 KSALEESGSEPAPVPAKEVEEAPAAV--------DAEADKKAKLINMLKVGGYFALWYILNIGYNIYNKKVLNAFPLPWTMALMQLAAGLLVFVPLWATGLRKAPKLSIPNVKTLLPLASMHTAAHATAVLSLGAGAVSFTHIVKAAEPAFSALFAALFLGQVFAAPVYAALVPVIGGVAVASMKELSFSWMSFGNAMGSNTFSALRGIFAKKNMGNPVGENMNAANLYAVLTCMGIGLLFPIALLTEGSKWAASWAAGVAAYGGKALLAKHMLFSGLFYYLYNEVAFLALSKVNPVTHAVGNTIKRVVVILASVVVFGTQMTPTAVAGSTVAIAGTLGYALAKNAF 387          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA)

HSP 1 Score: 314 bits (804), Expect = 3.300e-97
Identity = 178/389 (45.76%), Postives = 248/389 (63.75%), Query Frame = 1
Query:  277 TYPRGVGASPTSDLRSRALTSENDVGXXXXXXXXXRKSTALSSASSPGRAD-EKDPEAAPEQLV--RGGA----TGRSAPVVQQPKKTPAARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQK 1422
            T+PR +   P + L+ R   +E   G         +  TA  ++  P   + +  P  AP+ LV  RGGA    TG  A V Q  K      V  +  +WY F IGYN+YNK  LN +  PW +  VQL++G LYV  +WL GIRKAPKL+ QN++ ++P+A +H  AHI AV++L  GA+ +  I+KA EP FT+LF+AL L + F+  VYA+L+PV+GGVA+AS+ E  F+W+ F  AM AN + A RG+ AK +M  P+G+NMD  NLY V+TI+ATL++ P A +VEG K +  W AA+A    +  ++   + S L+FY+YNEVAF  L+++HPVTHAV NT+KRV +I ASI+VF + +T  G  GS VAI GVLLYSLA ++
Sbjct:   19 THPRLLSKIPEASLKGRPCFAEPPSGPTSRSFSLPQSRTAALTSVEPSVYNLQPTPVTAPKLLVSRRGGAVATATGSDAGVKQTLK------VGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQR-QLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLAVER 400          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: A0A835YPU6_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 7.160e-95
Identity = 154/267 (57.68%), Postives = 197/267 (73.78%), Query Frame = 1
Query:  625 LSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKY 1425
            ++++ L +G  YVC +W +G+RKAP+L   ++  V P+A+ H  AH+AAVV+L  GA+G+ QIVKA EPLFTA  +A LLG+V AWPVY TLLPVV GVAVAS++ELSF+      AM +N   A R V+ K +M   KGENMDAGNLY VMT+MAT ++TP ALV+EGPK RGLWAAA+AAG +   + +   LS +FFY+YNEVAFYCLNAIHP+TH + NT+KRV +IA S+I F H+ TP+G  GS  AI GVLLYS+ K  Y
Sbjct:    1 MASLTLIVGIPYVCALWATGLRKAPRLKRAHLATVFPVAMAHCFAHLAAVVSLGAGAVGFVQIVKAAEPLFTAALSAALLGQVLAWPVYLTLLPVVAGVAVASLQELSFSATALAAAMCSNTFAATRSVIGKRAMGRDKGENMDAGNLYAVMTMMATCVLTPLALVLEGPKLRGLWAAAVAAGASPGRLWRDIALSGVFFYLYNEVAFYCLNAIHPLTHGIGNTIKRVVMIAVSVIAFHHRFTPLGVVGSATAIGGVLLYSIVKGHY 267          
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Match: D8LC95_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 1.690e-94
Identity = 156/315 (49.52%), Postives = 215/315 (68.25%), Query Frame = 1
Query:  496 VVQQPKKTPA-ARVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWLSGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGEPLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAMTANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVEGPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVTHAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYARTK 1437
            V ++ K +P+  +V  Y  +WY F IGYN+YNK  LN +  PW +++ QL IG LYV  +WL+ +RKAPKL    +  +  LA LHT AH+ AV++L  GA+ +  IVKA EP+FTA F+A LLG+ FA PVY +LLP++ GV++AS+KELSF+W+ FG AM +N + A RG+L K  M  P GENM   NLY V+T++A   ++P AL+VEG K +  W AA+AAG T   +    +LS LF+Y+YNEVAF  L++++PVTHAV NT+KRV +I A+ I F   +TP+  AGS +A+ G LLYSL K  Y + K
Sbjct:   94 VEKEAKASPSMVKVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 408          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1668.3774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYA6_9PHAE7.430e-15369.63TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZDI5_9STRA1.570e-11657.91Triose-phosphate transporter family-domain-contain... [more]
A0A8J6C741_DIALT1.480e-10152.19TPT domain-containing protein n=2 Tax=Diacronema l... [more]
A0A836CHH7_9STRA1.000e-10050.00Plastidic triose-phosphate/phosphate translocator ... [more]
A0A6H5KC08_9PHAE1.470e-9949.07TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R9YBK2_9STRA4.470e-9851.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4KWF3_9STRA6.140e-9849.28Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DFS8_9STRA3.300e-9745.76TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A835YPU6_9STRA7.160e-9557.68Triosephosphate/phosphate translocator n=1 Tax=Tri... [more]
D8LC95_ECTSI1.690e-9449.52TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1668contigH-paniculata_contig1668:13352..25039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.1
Seed ortholog evalue2e-125
Seed eggNOG ortholog2880.D8LJY5
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15285
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
Hectar predicted targeting categorychloroplast
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Exons5
Model size2030
Cds size1365
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929322.7866166-UTR-H-paniculata_contig1668:13351..134291622929322.7866166-UTR-H-paniculata_contig1668:13351..13429Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1668 13352..13429 +
1691480815.4990566-UTR-H-paniculata_contig1668:13351..134291691480815.4990566-UTR-H-paniculata_contig1668:13351..13429Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1668 13352..13429 +
1622929323.08604-UTR-H-paniculata_contig1668:24452..250391622929323.08604-UTR-H-paniculata_contig1668:24452..25039Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1668 24453..25039 +
1691480815.546774-UTR-H-paniculata_contig1668:24452..250391691480815.546774-UTR-H-paniculata_contig1668:24452..25039Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1668 24453..25039 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929322.9792569-CDS-H-paniculata_contig1668:13429..141701622929322.9792569-CDS-H-paniculata_contig1668:13429..14170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 13430..14170 +
1691480815.508546-CDS-H-paniculata_contig1668:13429..141701691480815.508546-CDS-H-paniculata_contig1668:13429..14170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 13430..14170 +
1622929322.9985251-CDS-H-paniculata_contig1668:20905..210391622929322.9985251-CDS-H-paniculata_contig1668:20905..21039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 20906..21039 +
1691480815.516119-CDS-H-paniculata_contig1668:20905..210391691480815.516119-CDS-H-paniculata_contig1668:20905..21039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 20906..21039 +
1622929323.0153294-CDS-H-paniculata_contig1668:22861..229281622929323.0153294-CDS-H-paniculata_contig1668:22861..22928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 22862..22928 +
1691480815.523432-CDS-H-paniculata_contig1668:22861..229281691480815.523432-CDS-H-paniculata_contig1668:22861..22928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 22862..22928 +
1622929323.0342503-CDS-H-paniculata_contig1668:23287..235021622929323.0342503-CDS-H-paniculata_contig1668:23287..23502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 23288..23502 +
1691480815.5307746-CDS-H-paniculata_contig1668:23287..235021691480815.5307746-CDS-H-paniculata_contig1668:23287..23502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 23288..23502 +
1622929323.0573394-CDS-H-paniculata_contig1668:24244..244521622929323.0573394-CDS-H-paniculata_contig1668:24244..24452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 24245..24452 +
1691480815.5387418-CDS-H-paniculata_contig1668:24244..244521691480815.5387418-CDS-H-paniculata_contig1668:24244..24452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1668 24245..24452 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1668.3774.1prot_H-paniculata_contig1668.3774.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1668 13430..24452 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1668.3774.1

>prot_H-paniculata_contig1668.3774.1 ID=prot_H-paniculata_contig1668.3774.1|Name=mRNA_H-paniculata_contig1668.3774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=455bp
MRRPPPPVFAALAVCSCTAAAFAPPMTFAMASSTSPETPRSTRYGRTRPA
PPQQSAITVAAVSAGLTYPRGVGASPTSDLRSRALTSENDVGVSSSHRLR
SRKSTALSSASSPGRADEKDPEAAPEQLVRGGATGRSAPVVQQPKKTPAA
RVAFYLAVWYSFTIGYNVYNKATLNRISAPWTLSTVQLAIGSLYVCGIWL
SGIRKAPKLNGQNIRAVVPLAVLHTTAHIAAVVALSVGALGYFQIVKAGE
PLFTALFNALLLGEVFAWPVYATLLPVVGGVAVASMKELSFNWITFGGAM
TANMSGAARGVLAKGSMDMPKGENMDAGNLYGVMTIMATLMITPFALVVE
GPKFRGLWAAAMAAGHTKYSIVKGTILSSLFFYMYNEVAFYCLNAIHPVT
HAVANTLKRVFLIAASIIVFGHQLTPVGGAGSVVAIVGVLLYSLAKQKYA
RTKE*
back to top

mRNA from alignment at H-paniculata_contig1668:13352..25039+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1668.3774.1 ID=mRNA_H-paniculata_contig1668.3774.1|Name=mRNA_H-paniculata_contig1668.3774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11688bp|location=Sequence derived from alignment at H-paniculata_contig1668:13352..25039+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGTGTGTGAGACAAGCAGCAATTGATCAGGACAGAATTAAAAACTGTT ACATTCATCAGTCCCAGGAAACAAGCAGATGCGCCGCCCACCCCCGCCAG TTTTCGCGGCTCTGGCTGTATGCAGCTGTACAGCGGCCGCGTTCGCTCCA CCGATGACATTTGCAATGGCATCCTCGACGAGCCCTGAAACGCCAAGATC AACGAGATACGGTAGAACACGGCCAGCGCCACCACAACAATCTGCCATCA CCGTCGCTGCCGTCTCCGCCGGCTTGACGTATCCCCGTGGTGTAGGCGCC AGTCCCACAAGTGATCTTAGATCCAGGGCTTTGACTTCAGAAAACGATGT TGGTGTGTCATCTTCGCATCGATTACGTTCCCGCAAGAGTACTGCACTAT CGTCCGCGTCGAGTCCAGGGCGTGCGGATGAAAAAGATCCAGAAGCAGCA CCAGAACAACTTGTTCGCGGCGGAGCGACGGGGCGGTCGGCCCCTGTTGT TCAACAGCCAAAGAAGACTCCGGCCGCTCGTGTTGCGTTTTACTTGGCGG TGTGGTACAGCTTCACGATCGGGTACAACGTGTACAACAAGGCCACGCTG AACAGGATCAGCGCCCCGTGGACCCTGAGCACCGTGCAGCTTGCGATTGG GTCACTGTATGTGTGCGGGATCTGGCTCTCTGGCATAAGAAAGGCTCCAA AACTCAACGGACAGAACATAAGAGCGGTGGTGCCGCTCGCGGTCCTGCAC ACGACGGCGCATATTGCTGCGGTTGTGGCATTATCCGTGGGCGCGCTTGG CTACTTCCAAATCGTAAAGGTTGGTTAGGTTGGCGTCGGCGGTGCGTTGT TGTGGAGACCATGCGCCTCAATCGTCCGTTAGAACCAAGGACAGCTAGAT ATTTCGTCTGAAGGTGTTATTCAGCGAAATTTTCAGTGAATAGGGCCTGG CTGCCCCTCCCCTAACATGCGGCATTTCTTTGCATTCCGTGCCGTACTCG ATCTATTGACAAGTATCATGAACAGCAACTAATATCATTTCCCTTGAACC TTAAGAGTGCACACGGTGTCCCCGTTGATTATATGGAAAAATTTCGCATC AGCTTCTGTTAACGATCCGAATGTCTGTACTCTGTATGTGCTCTTGTGAA ATATATGATGATAGTTGCCCAGTCAGATCAGTGTGGATCTTGTAGGAAGA AATCGAATCTTGAAAAATAGGATGGAATATTTAGTTCACACAACAAGAGA TGCCCCACATGACGAACTCCTTGGTGCTTGCGCTTCGTTTCCGAATACGG CGGCGAGTTTGGATGATTGAGTGTTATTACATGTCTCTTTTCCTATACAT GGTAGGCGGCGCTTTGGTAAGATGAGTACGTGTAACTGAGGTAGCTGCAA TCGGTCGATAATATTGTTTCTTTATCGTCGAGCCATTTCAGCTGACTGCC GGGACGGGTCAAAAATCCAGATTCAGGGAGGAGCGAAAATCGAAGTGATG GCAATTACAGAGTAGTTGATTTCTCGAAGTGAGATTTGCTGACAACACAG CATCAACAAGTAAAAACAAACATCAGCTCAATTTCATGGTTCGATATAAA TTCATTAATCTCTCACGGCTAAGAGAGGACCGCCGGTTCTCCTCGAGCGT GGCTTCAAATGGCCCTGTGTACTGGGTCTAACTGTCTCAAGCTGACTCTT TTTCGGTTATGTATTTGGGTTATATTATTAGAGTTATGTCCTCCTTTCTT ATGCCATATCTTATCGAAGAACAATGGAAGGAAAATAGATATTTTAAAAA ATTATATAAATGATTATGTTCCGAATTTATTGTTTGAGTTTTACCGAGTA AACGTTGCATTCGTATTCGCCACGACAACTAAGAAGTATTCGCCTGAGTT GCAGAATGAGCGGACACATGAAATAAAGTAACCACCCCTGTCCATTTGAT TTACGAGTACCATTAGCAGTCGTGGATGGCCTGGGGCTCATTCTGAAGCT CAGGCGAACATATATCATTTTCATGGTGAATACGCCAATTAGTCGCGTTT GTCCGGGACGTGAAACGTTTTTTCTGCACGACGTGGAGGTTTGTAGGGAT ACCTGCTAGAAATGGTTCAGCCGGCCAGGTTGCGAAAGAGAAAAGACGTG GGAAACACCACAACTGCAGATGGTCCCAGAATAACACGCAGAGAGAGACA GAGTACGTGCACTAGCTCGGAAAATAGATTCTAGCTCAGCTGAACACGCA GCCTTCGTCTGATGCGAATCTGTTCTATGCTCGGGAAGCTATTTGATTTT ATGTCAAATCGCAATCGCGAAGGGTGCCATTTTGACCGTTTGTCCGTGTC TAGCTCACCCCAGGGCGCGCGACAACGACCTGTTCGCCTTTCATTTCTGG GCTAAGTATACCTGAATCAAGTACATGATGCACAGTCCATTAACAGCTAC GACCCGACCCATGTCTTGTTTTATGGGGAGATAGTGAAGCTCTTATTTTC ACGACGGGCAGTGCTGTATTTCGTTGTCACCCGTTTGCAATTGACCAATT TTGGTCAACACGTCGAGGCCTCCGTCCGTCTTTTCCGATAAAGCCAAAAT GCGTCATTTTTCTGCCTCCGGCGATGCCTCCAGCGCCCCCCCCTTCACTA GCCGCGGAGAGCTGTTGCGGATTCACCACCCTGGCGCTTCGCGCAATCGA TATTTTGATGATATATTGCCAAATTTTGGGCATATCGGATATGCCGATCT CTGAGATATATTATATCGTTTGTTTCTATCGAAACTCAACCCTAGTGAAA AATTCTGGAGACTGGAGTCTTTCTTTAAAACGCGGTGCGATCTATCTTTT TGCCAAAAATGGAAAAGCACTGCACATAGTCATGGATACATTCGACCCTC TCCATGAGCCAGAACTGAATTTCTGGGTCTCTGTATCGGCTGGTGAACGC ACATTATAAATATATTGTGTGATTGGAGCAACCGACATACCAATAGATTT GCTGATTTTTCGGTGATGTATTGGTGCCAGCGAAGGGAGCCTGCCGCGCG AATCGCCAAGCACGAGCAGGCGAACGGCGAAGCCGCGAGCCCCGATGCCC CCCCCCTGGCTGGTGGAGGGGGCTCGCTGGAGGCGCCGCCCGAGGCAGAA AAAACACGTGTTTGTGCTTCATCTCTCTTCAACATCGACGAATATAAGTA CCCATAGAGCTCTGAACTATCTTGAAATTTTCTTTCTGAAGGAAGGAAGC GAGAGCTATTTTCATAGTCAGTCTCCCGATCAGATAATTCATTGGCGTAT TCAGCGATGGTGGTACTGGAAGCCCGTGGTAATGTGTCTTGGGATTGGAG GGAGCTCATGCTACTAGCTGCGTACCTCGGGTGATTTTTGGTACGCTGCA GGCGTTGGATTATGACTACATATGTATATATTCAGTGTAAAATGACCATA CCCTTTGGGGGAAAATATTGATATGTTGATTGAAATATTGAAATTCACTT CATGGGGATGCCAATTGAGACAAATTCTGTTGCCTTCCATCCTCGACTGT TCTCACAGGCCAAGTTTCAGATTAAGAGAAAGGAAGACTGGCGGTCATGG TGTCGCCTGCAGCGCAAAAATAGGGTCAATGTTGACCGGTTTTGAATTCT TCTCGACCGCTCAAAATCGGTCGATTTTGTCACGAGTGCTGTAGTGGTGT GCGCTTTACCTGTAGCTTGTCTGCAAAGGTGGGAAATAGAAATCGTATGC CGTGGACAACTCGCGCGCAAGACACTTGGTAATTGTGTTCGAGGGTTGGG GGTTCTTCTTGGTGTAATAATGCAAGAGGTAAGGGGAGGACTGCGGGACA ACTAGAACTGTATTTTTTTGGCGGACGTGGGTGCATTTTTCTTGTAATGG TTATTGCGGGATTCGAAGTCGCGACATGTCGACCCCGAGTGCGCACAAAT TGTTCTCTAAAGGTACAATTTTCTGTGTGTTTTCTGTGTACCAAAGTGCT CTGACCGCTTTCTGGGTACTACATTATTATGCTGAGTTCATTGGTGTACC TTAACTATCGTGTTCGAGCAAGTGGTAATTCACTACTGCTATTTTCTGAG ATACGTTTTTTCGGCCACTGTCAGCGGATGTCCGTCGGTTTTTCCGTTTT GCGCTGTTTTCTCCGCTCGGCCTGGGTGTGTTCGCCTGGGCATTCATTTT GGGTGTCTCACTTCGTTCGTTCCGCGGGATATGTCAGTGCAGTACGTGCT CAGTTTCCTTTCCTGCTCAGTTGCTTTTTCTGGCACGGATCGATACGCAA AACAGGGAAAATACATCAAATATATATATATATATATCATTTGGTATGTT ACCAAGAAATCACACTCCCTCCGTCCCATAAGTCTGCGATATTGAAGGGT GTAACTTGTTGCAGTGACCTCCGAATCAAGAACGTTTTTTTTTTTTTGCG TCTGATTCCTTGGTGTCTTCCACGATAATTTTATTCTTCGCAGCTTTCCT CGTTCCCATCAATCAACCATTCTATGGTAGTGTCGAAAATATCTCGGTCG ATTTTGACTATTTGTGGTAAACTGCCCGCAGCCTGCCTTTTCTTAGTTTC GGTGTGTGCTGTACCTCGAAATCGTTACCTCCCAGCGCCTTCAAGACCTA ATTGTACCCGCTTACAGAAGCTCGGTCACACCTTCTCTAAGGTTGCCGCG TTGTATGCACCCTACATGCTCCTTACCCCCTCCACGAGGCCGTCTATTGT ACCGTAACGCTCCCTCCAAACTCTTACTTTTCAGAGATGCGAAGAACGCC AAATCGTTGATGTCGAGATCCGTTGACTCCGAATGCTGAGTTACGAGATT AACGTTCCACCCCCCGTCCCTCCCGAGTTCGTTGTGCTTCCGCGGCGTGT GTTTCCCCGTGTGGGGGGTCGCTCCGTCCTGCTGCGCGACCATTTCCTCA CCTTCCAACCAAAGCATCTCTTCCTTCAATGCTGCGAGAAAAGAGTCCTT GTACCACTCCAGGTATCACTCGGCGTCAATGGTCACGTCGAGCTCGTATT GCTACCCCCGTTAACGCCGGACCGAATTCCTTTGCCCCTTCTTGATAGCG CAAACACGCCAGATTCCAACCTTGCCGTCGAAATCGCGGGAAGGGTCTGA ACGCGAAACGACGCAGATGAACATCACCTTAGGAATGTGACTCTTGTGCT GTACTTTGGTGGACCCCACCCTTTCCTCCCCGGGAAACATGCGGATGCGA TCCCTGTCGCGAATTAGGTAAAACCACACTTCATCGATGTGAACTGTTTG GAAGCCGCTCCTGAAAGTGATGCAATTCCTTGCTGCTTGGTCCAGGATTA AGTCTACCTGGTTCTTTCGGTGCGTCAGCGACAGAGATGGGGTAATGCGC CGTTTCACCCTCGTGGTGCCCTTCTGTTTGAGCAATCGCTGAAACTTTGA GCTGCCGGCTACGAGACCAACTACCTCTAGCTTGGCAGACAGTTGATCGA GGGCCAGTGTTCGATTCGCGGCGTTGACCCTGCGAATCGAGGCGTGCTTT GTCGGTATGAAGTCCGACGGCCGCCCACTTCGTGACGCTGACCTCAGCCA AAGGGTGTTGCTATGGTCCAGTTTTTCTCTTCCACGAGCCCAAAGTTATC TGGGATATTGGTCGCCAACTCCAAACTGCTCCGCTAACTCTGACCCAACG CCTTTCAGAAGCTGTTTCTTACCGGGAAGTAGCGCTAAAGCGTACCGAAC GGCCAACGCGTTTCGACCTTCCTCGCTCAGCTCGCAATTTTTACCCCAGG CTGATGGGCTCTCGGCAAAAGATGCCGGACTCGCCGTAGTGGTACTATTG GTTGCGAAAATCGCGCCTCAGACGGTCTGGAGGCTGCACGAGAGTGGTAC AGCTCTTGGCGAGGTGCTAGGATAGTGTGTGACGATAAGGGGGGCGCTTT GTCCGCCGCCGGGCGCAGCGCAGCCGTTCAAAATGGAACCGAAAAGGGCC GTCTGTTTAGTTCCTCTTCTCGTGAATTTTTCGGAACTGTTTCGGAATGA TGTGCGAGAATGAACTATTTATTCTTAAATATTATGTTCATAGGTTCAAT TCAAGCCATACATCACCGAAAAAAGTTTCGTATCCGTAGAGAAACGGTCT ACACAAGAAAATGAAAACTCTTAACGTCGCTGACTGTTGGGACAGAGAGA GTATAATTTGACAGCCCTCATATATATGGCACCAAGGTATCATATCTTTG ACCCGACACCCATCTTCGTAAGAGGTAAACCAAGACTCATGCGTTTTGGC TTCTTTCCAGAACTCATATCCGGGCTTCTCTGTCTCTTCGCGCGAGCGGG ACTATCGACGATTGGATTGTTGCGCCCATAATTTCTGCGTCCATCGCTCC ACGGATATCGCGGCTATCTTGAAAACCTCCTCACTATATGCAACAGGGCA TTTGCCATTTCGTCAACATATCTTCTCTGCAATCTATTATATCTACTGTG GGACATACTATTTAGACGCTCGCCGAATCTCAAGAAGCACAACAAAATTT GTAATGCAGACTTTTGCATCAGCACACTATGAGTGCAAAACTCAAGGATT TACACAGAGAAATTTTGAAGAAAAAAAAATAGAAGAAAAATGATCCCAAA ACCGTATTTTCGTATGGTAAAATGAGATTTTTTGTTTAATCGACTCTAAG ATCTCTAAAATGTTCTTTTTTGCCAATATCTCGACTTTGTAAAAGAAAAA TGAAAATCCCCCTTGTTGTTTATTTGGCATTGATCATAGAAACGTGATAA AATTAAAATTAAAATTAAAATTAAAGCGTCGTTGTATCGACGGAGTTACG TTCGAAAAAATGAACAATCTGGCATATGGCCAAAAACAGCGACAAAAATG TTTCGATATGTTTTTCCAGCACAAGATCAGCCTCAAATGGGCAACAGGAC GAATCTCCCAACAATTCGGTTGTATTTTTCGCGCCTTGTGTCAAGGAAGC CCCCCCCCCCAGAAACTGTCTCAGCTGCTCGCACTCCGTAATTTGGCGTA TTTAGCGAGATAGAGCGTCTCCTAATTATGTCCCATAGTAGTTGTACCGT TCCGCCAACCAAGTTATCCGTCAGTTTCAGGTTTCAAGAATTTTAACGAC CGCTTGAGAACATCACTCTGAAAGTTGGCATGTTACGCTGCAAGACATTT TTACGTTTTATTTGACCAACCGGATGACACATGGAGCACAGCGCTTGCGT TATGCTCATTCCTAGCCCTTGGTTGTCGCTGTTTTTCGCGTTGCCGCATC AGCGGCAGATACCTTGTATGTATGTATGTATGTGCGCGTGAAACTGTTGA ATATTGAAATGACCGGCTGAAAATAGCATTGCGACGTTTAGCTTTTAACG CTGCACGAGCCAGGCGTTACCTATTTTCGTTTTTTTTGGCGTTTTATTTC ATTATGTATCAACAGCTGGCTCCCGAATTCTAGAAACAACCAACCAACAG CAAATGCCCTTCGCCGTTTTCTCCACGATATGATGCACACGCACGCACGG ACAGGCAGGGGAACCGCTGTTTACCGCTCTGTTTAATGCTTTGTTACTGG GTGAGGTGTTCGCCTGGCCGGTGTATGCGACGCTCTTGCCCGTTGTTGGT GGTGTCGCTGTGGCATCCATGAAGGAGCTTAGCTTCAAGTGAGTAGTGAG GTGTGCGCTTTTGGGGGGGGGGGGGGGGGGGGCAAGGAACAAGTGGTACA GTCTTGGTCACGGAGGGGGCAGGGCGGTTGGCATGCATACTCATATAACG AAAGCACAAAGCACAGTACAGTTATAGCACCGAAAGGGGAGCAGCGAAAG TATACATCTCAAGCCAAGTTGGTAATTCGTCGTATTCCTTTCATGTCACA CGTTGGGGGGCACTTGGCTTCGCTTTCCCGTCAGATTGTCTGAACACGCC ACTCTGCATTTGGCATACTGTGAGGATATCCGTACAGTGAGTTTTCACTC CGTGCTCCCTCCCCTCGAGTATTTGATTTTTGGTGAGCTAAGTATTCTCG GCATGGCATGGTATGGTATGGGTAGTGTAACATTCAATATTGTTGGAAAT GCATCAGATGCATCGAGAATTCCTTCCTTCCCCCCCTTTCTGGAGGACAG ATCTGCTGAAAACGTTAGCCCGAAAAAAAACAACAAAAAAAACGTATGAG TTTGTCTTGGCATTTCGTGTGCTTCTCCCGTTAATTTTCATGCACTACCG CGGAGTTCCGCCTATGCATGATTTCTAGGATGCTTCACACCGAGACAGTC ATCCCCAGGTCGCAACTTTAGGGGAGACGCCCTGCTTCTACACTAAGTAG CAGCACAAGCCTCGTGCATGGCAGCCCAATCCAGCGACATCGTTAGCAGG ACGATACACGGAGAACGTACCCAGCATAAATCACGTATGCACTTCATGTG CTACACGATCCCGCCCCAGTCTACAGCATCTCCAGGTCGCTGGAAAAATA ACACGTTCAATATATTATATTGGGAACTTGTAGAAGCAACCGTAACCCGA CGGTATCCCCCCCCTCCCCCCCCCCACAAACGCTTTTTTCAAACAAGAAA TTTCATGTGTCTTGGAAAGCATTTGATGGAAACCCTTGCATATCACACTG TACTGTAGGTGTAGTGTAAAATATGGGGTAAACGGACCTCAAATAAATAA GGGACGCTTGACTATTTTGTCAGGCAAGAACGAGGTGTTGTATGTTCTGC CGAAATACGTCACGTGCCAATGCAGCCGATGCCTACTCGCCTTACTCACG AGGGTGACAGTTCGACTGCGAAAACCCTACCCGCAGCGAGAAAAGATGCA TGATCGGGTTGATGACGGCCGTGCATGTGACGGGACCATTCACGGTCATG GGTATCATTTCGACAGATTGTGCGGGTCTTTTGCATGGATATATACTAAT GATCTGTATGACCTGTATGAGTCGTACATGTTTGCTTTTTTTCCTATTAG TGACCCCCGAGATCCTCTTCGTTCGCACGTGTTTGTCCACATGGGTGATC CGTACCTGATTGATGTGCAGCTCATTTCACGAAGCTTGACGTACATGCAC ACATTTCTTACGAATATCGAACACAGGCGTAGCCATGCGGATCATGATCG TTTCGTGGATCCTGCGGGTCGTTTGCACGGAAAGATGGTAACGATCTGTA CGATCTTTGTCGTACGTACTGCGTACATGTTCGTCCACAAAGTGACCTGA ATGGTGCGGATTGTTTGCAAAGGTTTGCCCCCACATGGCTGATTTAATAC GAACGGGATCTCGAGTGTATTGCTGCCGACCACTGATAAGCACGATTCGG GTCAGATGGACCAGTACAATGTTTCTCACTGTTGTGAATACTTTCGATCT CTTGGTCAGTTTTGACGCACTCATTCGTTCGGTCGTGCTGCTTGCTGAAC ATGTTCGGTGTTGTGTACACATCGGGGGGGGGGGGGCAATGCTATTCTTT GTCGACGAAGCTGGATAACATTCGGTGGGGCTATGACCGCGAACATGTCG GGGGCAGCTCGCGGTGTGCTTGCAAAGGTAAGAGCAGGTATTTCTTGTGC GTCGTGTTTGACGCTGTTTGCACCCGCCTGAAATTTGCAATTTGCACCCC CGAAAAAACGGCTGCTAGAAATGACCCCTTCATGTAGAAGGGTGGAAAAC CGGAAGATAAAGGCTTCGTGGAATCGCCACACAAGTTCCAAGACCCAAAT TATCCCCGAGACCTTGCATTTCCGGATGATCAAGGAATTCTCCCACGAAG GTGTAACTGTCAATCTGATGCACTCTTATTCCGAGAGATATTATATTTTT CTCGGAGATGCCCGTCCTGTTGTTGACAAGACACAGACAGACATATGTAT ACCGACTTTGTCTGTGTCTCTTTGACGTTGCCCCAGGGGTCCATGGACAT GCCGAAGGGAGAGAACATGGATGCAGGCAACCTTTACGGGGTGATGACCA TCATGGCCACCCTCATGATCACTCCGTTTGCCCTCGTTGTGGAAGGGCCA AAGTTTAGAGGGCTGTGGGCAGCAGCGATGGCGGCTGGTCACACGAAATA TTCGATCGTCAAGGGCACGATCCTGAGCAGTCTGTTCTTCTATATGTACA AGTGAGTCAGTACAATACGGCCCGGAAGGATCGGTCCCATCCAGCAGAGC TTGGGCAATCTGCTGCCGCCCTGTCAATAGTTTATTTTTAGAACGAGCGA GAGAGAGCAAAGCGGAGAAATAGTGGGAGACATTTCTAGTGGGTTACCAC ATCTCGGTTTATACAGTAGAGTACTTCGGATGATGCCATATGGTTTCGAA ACGGATAAATTGCGTCATTGCCTCCCACACACCATGTACTAGTTGTGCTA TGTTTATTGTTGCCAATTGAAAGGGGAAGGGTAACGAGGACTAGGGTAAT CAACGGAAGAGGTGCCTGTGTAGTAATTTCGTAATGCGGTCATGAGGTGT TCGGCGAAAATTCCAATTCATAATATTTTCTCCCTCCCAAGTTGTGACCC GAAATGGTTGATGGTCCTGAAGAGTCAGATTTCCGGGTGTTACTCTCGAG GCGCTAGCTTCTTTCCCGTGACATTCGAAAGCCGAGAGATGAGCTCGCTG GGTGTTCTCGTGTCAACATGTACCATCCCGCCCGCGTGACGCCTGATGAA TCCATTAGCAATGGATTATAGGCTACAAGCTTGCTGAGTGAGGAATGATG CGTTTTTCTTAGCTTCTCGCCGTTGCTCCATGGCTACCCTCTTATCTGTT CAACCCGCTACCGCCTGCCCCACTTCACCTTCGTCTTCTTCTTTCCTTTG TCTTTCGTTTTCTTGTACAACATGATCTGGAATGCTGTTGCAGTGAGGTG GCGTTCTATTGTCTCAACGCGATCCACCCCGTGACGCACGCCGTGGCCAA CACGCTGAAGCGTGTGTTCCTCATTGCCGCGAGCATAATCGTGTTCGGGC ACCAGCTTACGCCCGTTGGCGGCGCCGGGTCAGTGGTGGCTATTGTGGGC GTGCTGCTGTACTCGCTTGCGAAGCAGAAATATGCTCGGACGAAGGAATG ACGAGGCGCGATGCTTGCTCTGTTTTAGTATCTTTCGGAGAGTAATTATC CCTCACGAGAGATGTTCTACTGATGAAGTAGGGAACAAAGCCATGTTGTA GTCCTTGTCTGTATTGAGGCATCTGTATGTGTGAATGCCCTGTGACATGG AGCAGTCGACCCGTCGACTGCAGACATGCAACTAAATACAGCCCAAACAA AAAAGGGCATGTAAGGTACAAGAGGACGAAACAATATCACTCAACAGCTC TACAGTGACCTGTATTCATGATGGGAGAATCTCTCTGTTTTTTATATGTC GAATCAACGTTTTTGTTGCTGCTGCTGTCGTTCCGACGTGTCTTTAATGT ACCGCGAAAAAGTGGCGAGACTGCTGTATTGTATTCTCCTTGCACAGCGG AAATACACCGCACAGAAAAGTGGCGAGAAGTGGAACATGATCGGGTAAAT GCGTAGCACGAGTGTATTTCACGTCCGGCGGAAGCGGGGAGTTTTTGACG CGGTCAATAATTGTCGCTGAGTGCTGTTGGAGCTCTCGTTTGCAGTAATG TAAAATGAGGTATAAATGTGGGTGAGGCGCGGGGGAGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1668:13352..25039+

>mRNA_H-paniculata_contig1668.3774.1 ID=mRNA_H-paniculata_contig1668.3774.1|Name=mRNA_H-paniculata_contig1668.3774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2730bp|location=Sequence derived from alignment at H-paniculata_contig1668:13352..25039+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCCGCCCACCCCCGCCAGTTTTCGCGGCTCTGGCTGTATGCAGCTG
TACAGCGGCCGCGTTCGCTCCACCGATGACATTTGCAATGGCATCCTCGA
CGAGCCCTGAAACGCCAAGATCAACGAGATACGGTAGAACACGGCCAGCG
CCACCACAACAATCTGCCATCACCGTCGCTGCCGTCTCCGCCGGCTTGAC
GTATCCCCGTGGTGTAGGCGCCAGTCCCACAAGTGATCTTAGATCCAGGG
CTTTGACTTCAGAAAACGATGTTGGTGTGTCATCTTCGCATCGATTACGT
TCCCGCAAGAGTACTGCACTATCGTCCGCGTCGAGTCCAGGGCGTGCGGA
TGAAAAAGATCCAGAAGCAGCACCAGAACAACTTGTTCGCGGCGGAGCGA
CGGGGCGGTCGGCCCCTGTTGTTCAACAGCCAAAGAAGACTCCGGCCGCT
CGTGTTGCGTTTTACTTGGCGGTGTGGTACAGCTTCACGATCGGGTACAA
CGTGTACAACAAGGCCACGCTGAACAGGATCAGCGCCCCGTGGACCCTGA
GCACCGTGCAGCTTGCGATTGGGTCACTGTATGTGTGCGGGATCTGGCTC
TCTGGCATAAGAAAGGCTCCAAAACTCAACGGACAGAACATAAGAGCGGT
GGTGCCGCTCGCGGTCCTGCACACGACGGCGCATATTGCTGCGGTTGTGG
CATTATCCGTGGGCGCGCTTGGCTACTTCCAAATCGTAAAGATGCGCCGC
CCACCCCCGCCAGTTTTCGCGGCTCTGGCTGTATGCAGCTGTACAGCGGC
CGCGTTCGCTCCACCGATGACATTTGCAATGGCATCCTCGACGAGCCCTG
AAACGCCAAGATCAACGAGATACGGTAGAACACGGCCAGCGCCACCACAA
CAATCTGCCATCACCGTCGCTGCCGTCTCCGCCGGCTTGACGTATCCCCG
TGGTGTAGGCGCCAGTCCCACAAGTGATCTTAGATCCAGGGCTTTGACTT
CAGAAAACGATGTTGGTGTGTCATCTTCGCATCGATTACGTTCCCGCAAG
AGTACTGCACTATCGTCCGCGTCGAGTCCAGGGCGTGCGGATGAAAAAGA
TCCAGAAGCAGCACCAGAACAACTTGTTCGCGGCGGAGCGACGGGGCGGT
CGGCCCCTGTTGTTCAACAGCCAAAGAAGACTCCGGCCGCTCGTGTTGCG
TTTTACTTGGCGGTGTGGTACAGCTTCACGATCGGGTACAACGTGTACAA
CAAGGCCACGCTGAACAGGATCAGCGCCCCGTGGACCCTGAGCACCGTGC
AGCTTGCGATTGGGTCACTGTATGTGTGCGGGATCTGGCTCTCTGGCATA
AGAAAGGCTCCAAAACTCAACGGACAGAACATAAGAGCGGTGGTGCCGCT
CGCGGTCCTGCACACGACGGCGCATATTGCTGCGGTTGTGGCATTATCCG
TGGGCGCGCTTGGCTACTTCCAAATCGTAAAGGCAGGGGAACCGCTGTTT
ACCGCTCTGTTTAATGCTTTGTTACTGGGTGAGGTGTTCGCCTGGCCGGT
GTATGCGACGCTCTTGCCCGTTGTTGGTGGTGTCGCTGTGGCATCCATGA
AGGAGCTTAGCTTCAAGCAGGGGAACCGCTGTTTACCGCTCTGTTTAATG
CTTTGTTACTGGGTGAGGTGTTCGCCTGGCCGGTGTATGCGACGCTCTTG
CCCGTTGTTGGTGGTGTCGCTGTGGCATCCATGAAGGAGCTTAGCTTCAA
CTGGATAACATTCGGTGGGGCTATGACCGCGAACATGTCGGGGGCAGCTC
GCGGTGTGCTTGCAAAGCTGGATAACATTCGGTGGGGCTATGACCGCGAA
CATGTCGGGGGCAGCTCGCGGTGTGCTTGCAAAGGGGTCCATGGACATGC
CGAAGGGAGAGAACATGGATGCAGGCAACCTTTACGGGGTGATGACCATC
ATGGCCACCCTCATGATCACTCCGTTTGCCCTCGTTGTGGAAGGGCCAAA
GTTTAGAGGGCTGTGGGCAGCAGCGATGGCGGCTGGTCACACGAAATATT
CGATCGTCAAGGGCACGATCCTGAGCAGTCTGTTCTTCTATATGTACAAG
GGTCCATGGACATGCCGAAGGGAGAGAACATGGATGCAGGCAACCTTTAC
GGGGTGATGACCATCATGGCCACCCTCATGATCACTCCGTTTGCCCTCGT
TGTGGAAGGGCCAAAGTTTAGAGGGCTGTGGGCAGCAGCGATGGCGGCTG
GTCACACGAAATATTCGATCGTCAAGGGCACGATCCTGAGCAGTCTGTTC
TTCTATATGTACAATGAGGTGGCGTTCTATTGTCTCAACGCGATCCACCC
CGTGACGCACGCCGTGGCCAACACGCTGAAGCGTGTGTTCCTCATTGCCG
CGAGCATAATCGTGTTCGGGCACCAGCTTACGCCCGTTGGCGGCGCCGGG
TCAGTGGTGGCTATTGTGGGCGTGCTGCTGTACTCGCTTGCGAAGCAGAA
ATATGCTCGGACGAAGGAATGATGAGGTGGCGTTCTATTGTCTCAACGCG
ATCCACCCCGTGACGCACGCCGTGGCCAACACGCTGAAGCGTGTGTTCCT
CATTGCCGCGAGCATAATCGTGTTCGGGCACCAGCTTACGCCCGTTGGCG
GCGCCGGGTCAGTGGTGGCTATTGTGGGCGTGCTGCTGTACTCGCTTGCG
AAGCAGAAATATGCTCGGACGAAGGAATGA
back to top