mRNA_H-paniculata_contig1666.3761.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: D7FQL3_ECTSI (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL3_ECTSI) HSP 1 Score: 695 bits (1793), Expect = 1.260e-248 Identity = 341/425 (80.24%), Postives = 370/425 (87.06%), Query Frame = 3
Query: 162 GRLVINKTCKFGVLDVPGVTQKGGAATSSAAAGEASQCK---------SSSKSNGKDATDAKMEVPAFDASKLRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
G V+NKT KF V DV GVTQ GAA KS+ K + +E P FD S+L+ SECSLEERYELCRSV DECIQEEEL+ LLEARAHP+CYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIW+ATGMDMNNVEFLWASEEIN+RP+EYW RVMEVARLNNLSR+QRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYC +TKPKIK KPVILSHHMLAGLKEGQ KMSKSDPDSAIFMED+AADVKRKIKKAYCPPEV EGNP+LDYCKH+LFAWSG++TI+ R+GEP+TYTSYD++E+DFVSGK+HPSELKPA TDALN+ILQPVRDHF +G+ KKLL+TVRK KVTR
Sbjct: 5 GSFVVNKTSKFAVFDVKGVTQDAGAAXXXXXXXXXXXXXXXXXXXXXXGKGKSSNKGTKEVVLEAPPFDVSQLKASECSLEERYELCRSVADECIQEEELKRLLEARAHPICYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEINRRPAEYWGRVMEVARLNNLSRVQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDMTKPKIKFKPVILSHHMLAGLKEGQAKMSKSDPDSAIFMEDTAADVKRKIKKAYCPPEVVEGNPVLDYCKHLLFAWSGELTISFREGEPITYTSYDDMEKDFVSGKIHPSELKPAVTDALNAILQPVRDHFAKGDAKKLLDTVRKYKVTR 429
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A835YH37_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH37_9STRA) HSP 1 Score: 591 bits (1523), Expect = 1.140e-207 Identity = 290/422 (68.72%), Postives = 338/422 (80.09%), Query Frame = 3
Query: 144 GSKEMGGRLVINKTCKFGVLDVPGVTQKGGAATSSAAAGEASQCKSSSKSNGKDATDAKMEVPAFDASKLRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
GS R V+N T KF VLD+ G +Q A AG S ++S A D+ + P FD S L SE SL+ER++LCRSV +ECIQE+EL LLE + HP+ YDGFEPSGRMHIAQGVMR +NVNKLTKAGCHFKFWVADWFAQLNNKMGGDL KIQ VGKYMIEIW+A GMDM NV+FLWASEEIN+ P+EYW RVME+ARL+ ++RIQRC IMGR+E EMSSAQ+FYPCMQCADVF+LKADICQLGLDQRKVNMLAREYC T+PKIKHKPVILSHHMLAGLKEGQ KMSKSDPDSAIFMED+ D+ RK+KKAYCPP + + NP+LDYCK+ILF + G++TI +DG+ V YT+Y+ LE D+VSGK+HPS+LKPAAT +LN ILQPVRDHF GEP KLL V+K K+T+
Sbjct: 10 GSDSAKSRFVVNPTSKFSVLDIAGTSQP-------AVAGAKSSASAASAKGPAPAADSTIGAPPFDPSNLVKSELSLQERFDLCRSVAEECIQEDELMRLLEFKDHPIVYDGFEPSGRMHIAQGVMRALNVNKLTKAGCHFKFWVADWFAQLNNKMGGDLAKIQVVGKYMIEIWKAVGMDMRNVQFLWASEEINRSPAEYWGRVMEIARLSTVARIQRCCTIMGRSETEEMSSAQVFYPCMQCADVFYLKADICQLGLDQRKVNMLAREYCDQTRPKIKHKPVILSHHMLAGLKEGQIKMSKSDPDSAIFMEDTPEDLARKVKKAYCPPGIVDANPVLDYCKNILFGYFGQITIAYKDGDQV-YTTYEALEADYVSGKLHPSDLKPAATASLNKILQPVRDHFSSGEPAKLLALVKKYKITK 423
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A7S1UIM9_9STRA (Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIM9_9STRA) HSP 1 Score: 532 bits (1371), Expect = 2.430e-185 Identity = 259/359 (72.14%), Postives = 296/359 (82.45%), Query Frame = 3
Query: 333 AFDASKLRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
A D + L VS S++E+ EL +SV +ECIQE ELRAL E HPV YDGFEPSGRMHIAQGVMR INVNKLT+ GC FKFWVADWFAQLNNKMGGDL+KI+TVG+YMIEIWRA GMDM NV FLWAS+EIN RP EYWSRVME+ARLNNL+RIQRC IMGR E+ +MS+AQI YPCMQ ADVFFLKA+ICQLG+DQRKVNMLAREYC +PKI+HKPVILSHHML GLKEGQEKMSKSDPDSAIFMED AADVKRKIKKAYCPP AE NPILDYCKHILF ++G MT+ + G Y +Y ELE D+V+ +HP +LK A T +N+I++PVR+HF Q E KLL+ V+ +VTR
Sbjct: 17 AEDDAPLFVSPMSVDEKVELAKSVAEECIQESELRALYENLQHPVVYDGFEPSGRMHIAQGVMRAINVNKLTRTGCLFKFWVADWFAQLNNKMGGDLEKIRTVGRYMIEIWRAVGMDMTNVRFLWASDEINARPDEYWSRVMEIARLNNLARIQRCCTIMGRKESDDMSAAQIMYPCMQAADVFFLKANICQLGMDQRKVNMLAREYCDSRRPKIRHKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDEAADVKRKIKKAYCPPAQAENNPILDYCKHILFEYNGSMTVPCKGGPDREYATYAELEADYVADNLHPGDLKAAVTAGINAIIEPVREHFRQPEMVKLLKKVKGFRVTR 375
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: W7UAG6_9STRA (Tyrosine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAG6_9STRA) HSP 1 Score: 526 bits (1356), Expect = 2.390e-182 Identity = 274/420 (65.24%), Postives = 319/420 (75.95%), Query Frame = 3
Query: 165 RLVINKTCKFGVLDVPGVTQKGGAATSSAAAGEASQCKSSSKSNGKDATDAKMEVPA---FDASKLRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEP--KKLLETVRKLKVTR 1409
R + T +F VL+ PG TQ+ + +SS A ++ SS+ S+G + + A + + VS S + +Y L RSVG+ECIQE+ELR LLE + HP+ YDGFEPSGRMHIAQGVMR IN NKLT+ GC FKFWVADWFA LNNKMGGDLKKIQTVG+YMIEIWRA GMDM NVEFLWASEEIN EYWSRVM++AR+NNL+RIQRC IMGR + EMS+AQI YPCMQCADVFFLKADICQLGLDQRKVNMLAREYC K IK KPVI+SHHML GLKEGQEKMSKSDPDSAIFMEDS AD+KRKIKKA+CPPEV EGNPI+DY KHI+F + GK+ I + Y Y+E E D+ GK+HP +LKPA T ALNSIL+PVR HF + +P KKLL+ V+K K TR
Sbjct: 6 RFSVQATARFSVLEAPGGTQRS-STSSSQGAHNNTKSTSSTVSHGPLSAGGTITRGANGLIEGKEYFVSPLSADAKYALARSVGEECIQEQELRLLLEKKPHPIVYDGFEPSGRMHIAQGVMRAINANKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGRYMIEIWRAVGMDMQNVEFLWASEEINAHSDEYWSRVMDIARINNLARIQRCCTIMGRKDTEEMSAAQIMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVK--IKFKPVIISHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVIEGNPIIDYVKHIIFGYYGKIEIEFQGNVRKEYVDYEEFEADYKGGKIHPGDLKPAVTMALNSILEPVRKHF-ESDPVAKKLLDQVKKYKTTR 421
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A7S1GCS6_9STRA (Tyrosine--tRNA ligase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCS6_9STRA) HSP 1 Score: 519 bits (1337), Expect = 3.930e-180 Identity = 251/357 (70.31%), Postives = 296/357 (82.91%), Query Frame = 3
Query: 351 LRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGM--DMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTIT--PRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
L VS S+ ER L SVG+E +Q EL LLE + HPVCYDGFEPSGRMHIAQG+++ I VNKL +AGC FKFWVADWFA LN+KMGGDL KI+ VG+YMIE+WRA+GM D NV+FLWAS+EINKRP+EYW RVM+VA NNL+RIQRC IMGR EA EMS++QIFYPCMQCADVFFL+ADICQLG+DQRKVNMLAREYC T+PKIKHKP+I+SHHMLAGLKEGQEKMSKSDPDSAIFMED+AADVKRKIK+A+CPP V GNP+LD+C+HI+FA +G MT+ P +G VT+ S DE+E F +G +HPS+LK A T+ LN++LQPVRDHF G PK LLE V+K +VTR
Sbjct: 22 LYVSPLSVAERAALIMSVGEEVVQGSELTGLLEKKVHPVCYDGFEPSGRMHIAQGILKSIIVNKLVEAGCIFKFWVADWFAMLNHKMGGDLAKIRVVGEYMIEVWRASGMNVDAGNVQFLWASDEINKRPAEYWGRVMDVAMRNNLARIQRCCTIMGRKEADEMSASQIFYPCMQCADVFFLEADICQLGMDQRKVNMLAREYCDATRPKIKHKPIIVSHHMLAGLKEGQEKMSKSDPDSAIFMEDTAADVKRKIKRAFCPPGVVAGNPVLDWCRHIVFARNGSMTVRRKPDNGGDVTFASADEMEAAFAAGDLHPSDLKGALTEELNAMLQPVRDHFASGRPKALLEKVKKYRVTR 378
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A1V9ZR79_9STRA (Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZR79_9STRA) HSP 1 Score: 512 bits (1319), Expect = 5.750e-177 Identity = 246/353 (69.69%), Postives = 295/353 (83.57%), Query Frame = 3
Query: 360 SECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFA-WSGKMTITPRD--GEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
SE SL+ER+ELCRSVG+ECI+EEELR LLE + HP+CYDGFEPSGRMHIAQG++RVINVN+LT AGC F+FWVADWFA LNNKMGGDLKKI+ VG+YMIEIW+A GM+M+NV+FLWAS+EIN EYW+RV++VAR N++RIQRC IMGR EA +MS+AQ+ YPCMQCADVFFLKADICQLGLDQRKVNMLAREYC + KIKHKPVI+SHHML GLK+GQEKMSKSDPDSAIFMED+A+DV RKIKKAYCPP NPI+DY KHI+F ++ +T+ ++ G TY +Y+EL D+++ +HP +LKP TD LN IL+PVR HF QGEPKKLL ++K K+TR
Sbjct: 56 SELSLDERFELCRSVGEECIKEEELRLLLEKKDHPICYDGFEPSGRMHIAQGILRVINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAAGMNMDNVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYMTYEELAADYLAEAIHPGDLKPTLTDYLNQILEPVRAHFSQGEPKKLLAEIKKFKITR 406
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A1W0A2D4_9STRA (Tyrosine--tRNA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D4_9STRA) HSP 1 Score: 510 bits (1313), Expect = 8.230e-176 Identity = 244/353 (69.12%), Postives = 290/353 (82.15%), Query Frame = 3
Query: 360 SECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRD---GEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
S +LEER+E+CRSVG+ECI++EELRALLE + HP+CYDGFEPSGRMHIAQG++R+INVN+LT AGC F+FWVADWFA LNNKMGGDLKKI+ VG+Y+IEIW+A GM+M NV+FLWAS+EIN EYW+RV++VAR N++RIQRC IMGR EA +MS+AQ+ YPCMQCADVFFLKADICQLGLDQRKVNMLAREYC + KIKHKPVI+SHHML GLK+GQEKMSKSDPDSAIFMED+A+DV RKIKKAYCPP NPILDY KHI+F K + R G TY ++DEL D+++ +HP +LKP TD LN IL+PVR HF QGEPKKLL ++K K+TR
Sbjct: 72 STLTLEERFEICRSVGEECIKDEELRALLEKKDHPICYDGFEPSGRMHIAQGILRMINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYLIEIWKAAGMNMENVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPILDYMKHIVFPLFTKGVVVKRKEEFGGDKTYMTFDELAADYLTEAIHPGDLKPTLTDYLNQILEPVRQHFSQGEPKKLLAEIKKYKITR 422
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A7S3HMT5_9STRA (Tyrosine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMT5_9STRA) HSP 1 Score: 508 bits (1309), Expect = 3.450e-175 Identity = 260/412 (63.11%), Postives = 303/412 (73.54%), Query Frame = 3
Query: 174 INKTCKFGVLDVPGVTQKGGAATSSAAAGEASQCKSSSKSNGKDATDAKMEVPAFDASKLRVSECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRDGEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
+NK+ KF V+D V Q S+ AA PA L VS S+EE+ + SVG+E + EEL AL +R HP+ YDGFEPSGRMHIAQGV+R INVNKLT GC FKFWVADWFAQLNNKM GDLKKI+ +G+YMIEIW+A GMDM NV FLWAS+EIN EYWS VM+VAR+NNL+RIQRC IMGR + EMS+AQIFYPCMQCADVFFLKADICQLG+DQRKVNMLAREY G K K K PVI+SHHML+GLKEGQEKMSKSDPDSAIFMEDSA DVKRKIKKA+CPPEV + NPI+DY K+I+F + G MT+ +G PV Y +Y+ LE D+ SG+VHP +LK A T+ALN IL+PVR HF GEPK LL+ ++K KVTR
Sbjct: 39 VNKSSKFSVVDTKSVDQPVPKKKSAVAA------------------------PAPVEENLFVSNLSVEEKVRIAMSVGEETLTVEELTALFTSRQHPIVYDGFEPSGRMHIAQGVLRAINVNKLTSTGCLFKFWVADWFAQLNNKMDGDLKKIRMIGQYMIEIWKAIGMDMQNVRFLWASDEINAHAEEYWSLVMDVARVNNLARIQRCCTIMGRKDTEEMSAAQIFYPCMQCADVFFLKADICQLGMDQRKVNMLAREYAGTKKKKFK--PVIISHHMLSGLKEGQEKMSKSDPDSAIFMEDSAEDVKRKIKKAFCPPEVVDKNPIMDYAKNIIFGYYGTMTVNSAEG-PVVYNAYETLEEDYKSGRVHPGDLKAAVTEALNRILEPVRAHFATGEPKILLDKIKKFKVTR 423
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A7S2ZFH5_9RHOD (Tyrosine--tRNA ligase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFH5_9RHOD) HSP 1 Score: 506 bits (1303), Expect = 4.740e-175 Identity = 244/353 (69.12%), Postives = 292/353 (82.72%), Query Frame = 3
Query: 363 ECSLEERYELCRSVGDECIQEEELRALLEAR-AHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRD--GEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQG-EPKKLLETVRKLKVTR 1409
E SL+ER L SVG+ECI EE LR LLE + P+CYDGFEPSGRMHIAQGV++ INVNKLTKAGC FKFWVADWFAQLNNKM GDL KI+TVG Y IE+W+A+GMDM +VEFLWAS+EINK+ EYW+ VM++AR NNL R++RC QIMGRAE+ EMS+AQIFYPCMQCAD+FFLKADICQLG+DQRKVNMLAREYC LTKPKIK+KP+ILSHHM+ GLK+GQEKMSKSDPDSAIFMED+ +V+RKIKKA+CP ++ EGNP LDY + I+F GK+T+ ++ G V Y +Y++LE++FV G++HP +LK A +N ILQPVRDHF Q E KK+L VRK KVTR
Sbjct: 21 ELSLDERVALALSVGEECITEEGLRNLLEKKPTRPICYDGFEPSGRMHIAQGVLKSINVNKLTKAGCTFKFWVADWFAQLNNKMDGDLNKIRTVGMYFIEVWKASGMDMEHVEFLWASDEINKKSGEYWTLVMDIARKNNLLRVKRCSQIMGRAESDEMSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNMLAREYCDLTKPKIKNKPIILSHHMMPGLKQGQEKMSKSDPDSAIFMEDTEQEVRRKIKKAFCPEKIVEGNPCLDYTRSIVFPKLGKVTVQRKEEFGGDVVYETYEQLEKEFVEGQLHPGDLKAALASCINEILQPVRDHFEQNDEAKKILAKVRKYKVTR 373
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Match: A0A6G0XTC8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTC8_9STRA) HSP 1 Score: 506 bits (1302), Expect = 2.260e-174 Identity = 245/353 (69.41%), Postives = 289/353 (81.87%), Query Frame = 3
Query: 360 SECSLEERYELCRSVGDECIQEEELRALLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWRATGMDMNNVEFLWASEEINKRPSEYWSRVMEVARLNNLSRIQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCGLTKPKIKHKPVILSHHMLAGLKEGQEKMSKSDPDSAIFMEDSAADVKRKIKKAYCPPEVAEGNPILDYCKHILFAWSGKMTITPRD---GEPVTYTSYDELERDFVSGKVHPSELKPAATDALNSILQPVRDHFGQGEPKKLLETVRKLKVTR 1409
S SL+ER+E+C+SVG+ECI+EEELR LLE + HP+ YDGFEPSGRMHIAQGV+R+INVNKLT AGC F+FWVADWFA LNNKMGGDLKKI+ VG+YMIEIWRA GM+M+NV+FLWAS+EIN EYW+RV++VAR N++RIQRC IMGR EA +MS+AQ+ YPCMQCADVFFLKADICQLGLDQRKVNMLAREYC + KIK KPVI+SHHML GLK+GQEKMSKSDPDSAIFMED+ +DV RKIKKAYCPP EGNPI+DY KHI+F + I R G TY +YDE+ D+++ +HP +LKP T+ LN IL+PVR HF QGEPKKLL ++K KVTR
Sbjct: 57 STMSLDERFEICKSVGEECIKEEELRLLLEKKEHPIVYDGFEPSGRMHIAQGVLRMINVNKLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWRAVGMNMDNVQFLWASDEINAHADEYWTRVIDVARKFNIARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD--EAKIKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEIEGNPIMDYMKHIIFPMFPQGVIVKRKEDFGGDKTYMTYDEMAADYLAEAIHPGDLKPTLTEYLNQILEPVRKHFEQGEPKKLLAEIKKFKVTR 407 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1666.3761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1666.3761.1 >prot_H-paniculata_contig1666.3761.1 ID=prot_H-paniculata_contig1666.3761.1|Name=mRNA_H-paniculata_contig1666.3761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=424bp MGSKEMGGRLVINKTCKFGVLDVPGVTQKGGAATSSAAAGEASQCKSSSKback to top mRNA from alignment at H-paniculata_contig1666:12011..25049+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1666.3761.1 ID=mRNA_H-paniculata_contig1666.3761.1|Name=mRNA_H-paniculata_contig1666.3761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13039bp|location=Sequence derived from alignment at H-paniculata_contig1666:12011..25049+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1666:12011..25049+ >mRNA_H-paniculata_contig1666.3761.1 ID=mRNA_H-paniculata_contig1666.3761.1|Name=mRNA_H-paniculata_contig1666.3761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2544bp|location=Sequence derived from alignment at H-paniculata_contig1666:12011..25049+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |