prot_H-paniculata_contig16651.3757.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16651.3757.1
Unique Nameprot_H-paniculata_contig16651.3757.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1098
Homology
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BLAST of mRNA_H-paniculata_contig16651.3757.1 vs. uniprot
Match: A0A6H5JI95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI95_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.820e-8
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0 
Query:  585 AIRLARESRARSIEAMITARQAHAEMLRAKSFSDQHNKAAMLKVEQATNLKDKLLMANELVSGYSGLRTNAEVKLRSAEAEEAAAVGRMNAA 676
            A ++A   R R+I     AR+   ++L AK+FS+++NKAAM +VE AT LKDKL+MAN+L+SGY  +R  A  ++++A AEE  AV R   A
Sbjct: 1681 AAQMAELFRQRAIAERQAARKLTEDVLDAKAFSERNNKAAMWRVETATRLKDKLIMANDLISGYINMRRGAVEEVKAAMAEETRAVARFKEA 1772
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16651.3757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI95_9PHAE2.820e-846.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..1097
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16651contigH-paniculata_contig16651:1503..5284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16651.3757.1mRNA_H-paniculata_contig16651.3757.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16651 667..5678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16651.3757.1 ID=prot_H-paniculata_contig16651.3757.1|Name=mRNA_H-paniculata_contig16651.3757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1098bp
MLEAQASSAGVVAMPQAASAAPAGAISPPASASELASASASASASSAKEN
PRESSKQAPEKTAPTPKPQGKPEPPTRHSTVTTVATTPKAKPAIKKKKST
GKVGGGSAAAAAVAAAAVAVSASKWRPLTLEPATAVASSTAGATGTTASR
ESCGAGRGTVQTPNTQRVSPAATGVSGRPSDGAGKGLGRTPDPQARRKRQ
RSGGKPTTPADHPCSPVAPLDSPSLLWNQPVPRVGAGAVPSPLSRLHDAF
HPAPGAAGVGSRSCIDPDMYRNSPNFLEERFSSPRSPVLGGHDDVGSRFN
LASFPISPAAAALNGAPVFSCSSSSSSGTSSGAPTFSSSSATPANGARPF
SFCTATTGNGAATAFSAPPANTVNAPAVGSTAAATAAAAVMGTHSAATAT
AGVNGYSIRHGSGATSQRIGSSPTLQAQDRLLLPQGRPQGTEGDSWTDQN
GGGGFVQPTERSSRSISSSKNKNNNNNLLGGWGSSLADSASFGEGVGRAS
GSQRGCGQAQTQPEAKVSAGYILFNASPPENVHAAAAAASAAAAAAAAVA
ARDAVAVAAARDAVVVAAARDAAAAPMLTPAVNQAIRLARESRARSIEAM
ITARQAHAEMLRAKSFSDQHNKAAMLKVEQATNLKDKLLMANELVSGYSG
LRTNAEVKLRSAEAEEAAAVGRMNAALLVLQAAEAEASKVYAEHEKRLTA
GAASNGNLQPWSLEPNITMTPSSTSSASSTSSTRSSSGRTSSSSDVTNDG
GSAGSSSPLLAPADTANNNHPPAMATGPQGSAGGGSNTTTTSPGANGTTS
PVPAAVWPGGDQMPWANGWWHNASPIVTPDPAQSRFSPRDPPQPPPPTLT
AGARGRPSTPPEISNSPPAAMTPSAGDGPLGAMTEAVATAASAVKGYQAR
SRACRDAAIAATIHFGEQKTAFILHLQKLLDAENSRARLVRNTQVASEQA
SQASQAAMQHEAVAATKKQEAERAASHAKRVHWEAKQLDLKMRQVVVQER
ARRQEARELGRVRQAIEGTNASDNGVGIGIGNGNENVVNHSDSTRGVAGN
AAAVSGVGGVGEAGSAGSGAGGRKRKGDDDLVQSSSTGNGSKHQRTV*
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