mRNA_H-paniculata_contig1665.3756.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: A0A6H5JIG6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG6_9PHAE) HSP 1 Score: 332 bits (850), Expect = 3.140e-92 Identity = 342/1106 (30.92%), Postives = 433/1106 (39.15%), Query Frame = 1
Query: 202 TCSRTDHE--DAGLFRGVRLRDLEFGDRLGARRDGGDGFQGCNSRVFRVSLRRTTYDEVMPAPVQTKKQSSPPQQVDEQPCVAIKLFAPLAAARTCGDNRRANDSRAGERAENVSPWVLPPGGYFNARPFVLPAAVSGGAGGGSAPAEQGVIPPGEEVLQL----REAEGAKRGGC-DGDXXXXXXXXXXXXXXGAAVRPRQQHGNQEFALKMALTYQGQDPAQAASDMATEISVLVGRRLPPHPNIMRGIHSFQDEISKELQPLLWAGLGSEAEDMLSPLTSFLVMPLFTAGSLQALLEKRRLRCNGPPFLRLMEVMRFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHRMLVLTDFGSCVDATRPPTKPPLTPTPASPSSYSLLPPRRTPPSFDRDSATELPSSPSVPTSFLLPPPTTPTVWARSMAKPQIVGVSEEPNLQVAAAAXXXXXXXXXXXXXXXXXXXXPKAAIEVNISDCALPRPSCLCTSSRDEVRRDDGNVSSAAVSPCKEETCAREDRCSCRGDDCSDGSGFDRAGGDRHTSSPATRYKALEEGSRGVPTPTQLADKLFPAAQ---VAAESPPPADRSFSQP--PGEQKVVREREAYRRGSDGCGGDLDKEAAQGQDTNEQRRNCDGVDDDLSGDDEKRRDGTAWDVKRDGXXXXXXXXXXXXVAVKAAHPAGDVDLSASPCVHAATQEQLVFQFNEYFAAGTPNSIAPELARSWQKKSVFDFRRSDVYSVGVCMYYMLNPAGPTEARARNRLFGGGSSAAISARAMGPGDWFNEYGDEVWPLPLFPRDQGGYPFEVCQLCRALLQPEPQRRQSASEGHSLAKYYFSRLENAAASARRHRRNDAVSDDXXXXXXXDVGRHGFGASGVSSPATVSSAAPPGVSEGGPAAASATGVPSPSASAGLDTEPKRRVVAVNRLAEDTRCCNGSKKRRLG--EYPR--HTAAXXXXXXXXXXXXVCVGNLSPTGKAPVSARGTTSSEG------------GEVTVSLGDDKGGSSSAYSAVRGDKAARRRRSAGERGRAEEESAWGEPDELVRCDRISHMRDWFPAATPANLAAALEAHQWDVRASMDAFCNHDGNDS 3435
TC+ HE A FR V+L+D GDRLGA RDGG GFQG NSRVFRV LR +D A+R D A+ S A P P++ S P G V L + G C G+ + + + E+ALKM LT +DP QA +M TEI VLVG R+PPHPNIMRG+HSFQD I +ELQP LW GL A LSP T+FLVMPLFTAGSLQALL KRRLRC GPPFLRL+E MRFL+QMLSA+ HLLA+G+AHNDIKPDNWLL AD R LVLTDFG+C D++ PP PR P S SSP+VP L + V A + + + G P C SS G V S A S+G+ AG ++ T K E VP+ + F +A + S P D + PG Q R R YR D +RD V+ G V C +++V F+ Y AG PN +APELAR+W++++ +F RSDV+SVG+CMY ML P + + G+ + N+ E WPLP+FP ++GG PFEV QLCR LL +P +R +A EG S+A Y SRLE+A + DA+ G++G S P SP A+ G R A N LA K RLG E P+ H AA V ++P P S G S++ G + G +G +S+ +A R +EE E DELV+ DRIS MR+ F A P NL AL+ WDV A+ F + DS
Sbjct: 37 TCTTPPHEVSTATDFRDVKLQDFHIGDRLGATRDGGKGFQGVNSRVFRVRLRSRRHDH---------------------------------ASRGRADGANAHPSSV---ASPSLPSXXXXXXXXXXXXXXXPSSTS--------------PPSGSLVKDLMGMCEQLRKGSFGACLSGNYGSVEQGAANAKRSAVPDKAEDKPADTEWALKMVLTLAAKDPLQAEREMKTEIDVLVGGRIPPHPNIMRGVHSFQDTIGRELQPRLWDGLEPNAGGTLSPHTTFLVMPLFTAGSLQALLNKRRLRCKGPPFLRLLETMRFLKQMLSAISHLLAHGVAHNDIKPDNWLLCADQRTLVLTDFGACFDSSNPPQ------------------PRSKPSS----------SSPAVPVPCL---GASAAVSATDLEQTAVTGRGSNP------------------------------------------------CRSS--------GAVGSTAXXXXXXXXXXXXXX--------SNGTDLSGAGAAEPLANAVTGRKRPMEAGNFVPS------RDFGSANRKHLGVSSMPSCDTGTNADSVPGPQDSKRRRLGYR-----------------------------------------------DQERD--------------KVRICSATGTV------CSTTEVSDKMVIPFSNYCVAGAPNILAPELARAWEEETPLNFTRSDVFSVGLCMYRMLRPD--------SVIIDNGTGLEVKDPLEKTKGLTNQ---EAWPLPIFPENKGGCPFEVSQLCRGLLLADPCKRLAAFEGQSIASNYVSRLEDADGKGQ-----DAMERSVSAS----------GSAGASRPRYQ--------------------FESPRAT-GTGEIHGRETRADNALAR--------KHERLGFVENPKSGHFAAVPPIKSHS-----AVDGMAP----PPSPAGGPSNDSCRRDRMLLFRGAGRINCERGGAEGATSNGAAAAG-------------RSSSEERQLPREVDELVKSDRISQMREIFANAAPDNLFKALDTEDWDVAAACAVFGDSTSGDS 847
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: D7G480_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G480_ECTSI) HSP 1 Score: 129 bits (323), Expect = 1.480e-27 Identity = 122/406 (30.05%), Postives = 171/406 (42.12%), Query Frame = 1
Query: 2254 CVHAATQEQLVFQFNEYFAAGTPNSIAPELARSWQKKSVFDFRRSDVYSVGVCMYYMLNPAGPTEARARNRLFGGGSSAAISARAMGPGDWFNEYGDEVWPLPLFPRDQGGYPFEVCQLCRALLQPEPQRRQSASEGHSLAKYYFSRLENAAASARRHRRNDAVSDDXXXXXXXDVGRHGFGASGVSSPATVSSAAPPGVSEGGPAAASATGVPSPSASAGLDTEPKRRVVAVNRLAEDTRCCNGSKKRRLGEYPRHTAAXXXXXXXXXXXXVCVGNLSPTGKAPVSARGTTSSEG------------GEVTVSLGDDKGGSSSAYSAVRGDKAARRRRSAGERGRAEEESAWGEPDELVRCDRISHMRDWFPAATPANLAAALEAHQWDVRASMDAFCNHDGNDS 3435
C A ++V F+ Y AG PN++APELAR+W++++ +F+RSDV+SVG+CMY ML P + + G+ N+ E WPLP+FP ++GG PFEV QLCR LL +P +R +ASEG S+A Y SRLE+A + DA+ XXX R + S P E R A + LA K + G H+AA V ++P P S G ++G G + G +G +S+ +A R +EE+ E DELV+ DRIS MR+ F +A P NL AL+ WDV A+ F + DS
Sbjct: 68 CSTAKVSYEMVIPFSNYCVAGAPNTLAPELARAWEEETPLNFKRSDVFSVGLCMYRMLRPD--------SVIIDNGTGLEEKDPLEKTKGLTNQ---EAWPLPIFPENKGGCPFEVSQLCRGLLLADPYKRLAASEGQSIASNYVSRLEDADGKGQ-----DAMQRSASASXXXGASRTRY---------QFESQRPTDTGE----------------------IHGRETRADHALARKHEGLGSVKNPKRG----HSAAVPPIKSHS-----AVHGMAP----PPSPAGGPLNDGCRRDRMLLFRGAGRINGERGGAEGAASNGAAAAG-------------RSSSEEKQLPTEVDELVKSDRISQMREIFASAAPENLFKALDTKDWDVAAACAVFGDSTSGDS 400
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: A0A1E7FDD2_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDD2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.980e-5 Identity = 44/169 (26.04%), Postives = 79/169 (46.75%), Query Frame = 1
Query: 805 FALKMALTYQGQDPAQAA-----SDMATEISVLVGRRLPPHPNIMRGIHSFQDEIS-------KELQPLLWAGLGSEAEDMLSPLTSFLVMPLFTAGSLQALLEKRRLRCNGPPFLRLMEVMRFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHRMLVLTDFGSCVD 1275
FALK+ D A+ +++A E VL+ R+PPHPN++ H+F+D + + P LW+ + + + +P+ M+V R++ Q++ A++HL ++G+ H D+KP+N LL +H +V+ DFG+ D
Sbjct: 50 FALKILEKKTAADLAKRQHPNVYNEIAMERRVLL-ERIPPHPNVINMYHAFRDFENLYYLMDLHNVNPDLWSQIRYKGNMVGAPV---------------------------------MQVKRWMSQLVDALEHLHSHGIVHRDLKPENVLLN-EHNHVVVIDFGTAKD 183
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: UPI0020078D7C (kinase-like protein n=1 Tax=Xylaria bambusicola TaxID=326684 RepID=UPI0020078D7C) HSP 1 Score: 58.2 bits (139), Expect = 4.890e-5 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 1135 RFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHRMLVLTDFGSC 1269
RF+ ++ SAV HL ANGLAHND+KP N LL DH M V+ DFGSC
Sbjct: 182 RFMAELGSAVAHLHANGLAHNDLKPSNILLDGDH-MPVVIDFGSC 225
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: UPI000A2A54DF (serine/threonine-protein kinase PINK1, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A54DF) HSP 1 Score: 59.3 bits (142), Expect = 6.370e-5 Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 901 LPPHPNIMRGIHSFQDEI-----SKELQPLL------WAGLGSEAEDMLSPLTSFLVMPLFTAGSLQALLEKRRLRCNGPPFLRLMEVMRFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHR---MLVLTDFGSCV 1272
+P HPNI+ +HSF DE+ +++ P G+G +T FLVMP L L + C+ P + E++ L Q+L V HL+ NG+AH D+KPDN L+ + LV+ DFG C+
Sbjct: 240 IPTHPNILPVLHSFVDEVPCLPDARDSYPAALPPKYTXQGIGRN-------MTMFLVMP-----RLDCTLHQYLKXCS--PSKKTSELL--LLQLLEGVSHLVDNGVAHRDMKPDNLLVDMSYPGCPRLVICDFGCCL 361
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: UPI0013F2B0FD (serine/threonine-protein kinase PINK1, mitochondrial n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F2B0FD) HSP 1 Score: 59.3 bits (142), Expect = 6.910e-5 Identity = 57/186 (30.65%), Postives = 79/186 (42.47%), Query Frame = 1
Query: 805 FALKMALTYQGQDPAQAA-----------------SDMATEISVLVGRR--LPPHPNIMRGIHSFQDEISKELQPLLWAGLGSEAEDMLSP------LTSFLVMPLFTAGSLQALLEKRRLRCNGPPFLRLMEVMRFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHRM-----LVLTDFGSCV 1272
FALKM Y + A A +M LV + LPPHPNI+ + F D I + P W ++P ++ FL+M + +L+ LE R + N + L L Q+L AV H+ ANG+AH D+K DN LL LV+TDFG C+
Sbjct: 215 FALKMMFNYDAESNATAILRAMYRETVPSRKHYGNDNMTIWEQKLVENKATLPPHPNIVAMYNVFADRIP--ILPDSWGMYPDALPTRINPHGSGRNMSLFLLMKRYDV-TLKQYLESRSVDGNMRVSILL------LAQLLEAVAHMNANGIAHRDLKSDNILLDLSEETDNCPSLVVTDFGCCL 391
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Match: UPI0005EEFBBB (serine/threonine-protein kinase PINK1, mitochondrial n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005EEFBBB) HSP 1 Score: 58.9 bits (141), Expect = 9.060e-5 Identity = 45/135 (33.33%), Postives = 63/135 (46.67%), Query Frame = 1
Query: 901 LPPHPNIMRGIHSFQDEISKELQPLLWAGLGSEAEDMLSP------LTSFLVMPLFTAGSLQALLEKRRLRCNGPPFLRLMEVMRFLQQMLSAVDHLLANGLAHNDIKPDNWLLGADHRM-----LVLTDFGSCV 1272
LPPHPNI+ + F DEI + P W ++P ++ FLVM + +L+ + R + L L Q+L AV H+ ANG+AH D+K DN LL LV+TDFG C+
Sbjct: 266 LPPHPNIVAMYYVFTDEIP--MLPGSWGMYPDALPSRINPHGSGRNMSLFLVMKRYDT-TLKQYITNRNIDMRVSILL--------LAQLLEAVAHMNANGIAHRDLKSDNILLDLSEETDNSPSLVVTDFGCCL 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1665.3756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1665.3756.1 >prot_H-paniculata_contig1665.3756.1 ID=prot_H-paniculata_contig1665.3756.1|Name=mRNA_H-paniculata_contig1665.3756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1402bp MSRTPPLAQVEVIDLSEDSHPAAASDACTAATTESTCSRTDHEDAGLFRGback to top mRNA from alignment at H-paniculata_contig1665:639..24729+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1665.3756.1 ID=mRNA_H-paniculata_contig1665.3756.1|Name=mRNA_H-paniculata_contig1665.3756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=24091bp|location=Sequence derived from alignment at H-paniculata_contig1665:639..24729+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1665:639..24729+ >mRNA_H-paniculata_contig1665.3756.1 ID=mRNA_H-paniculata_contig1665.3756.1|Name=mRNA_H-paniculata_contig1665.3756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=8412bp|location=Sequence derived from alignment at H-paniculata_contig1665:639..24729+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |