prot_H-paniculata_contig16634.3751.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16634.3751.1
Unique Nameprot_H-paniculata_contig16634.3751.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length324
Homology
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BLAST of mRNA_H-paniculata_contig16634.3751.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 5.750e-48
Identity = 106/152 (69.74%), Postives = 112/152 (73.68%), Query Frame = 0 
Query:    1 MQLARFQHRIAGEPAAARTTFRAAVADIPGSRELWLAFLEFEAAQPQARRSIYSSLALHAGRVEAAFRMAIEEEGSGGGG--------------DNEEARRLTVEDKADLWEWFEEFVEDLSMDVAKVMKMRAEHRAWIRAHSADAHEAAAA 138
            MQLARFQ R+ G P +AR TFRAAV DIPGSRELWLAFLEFEAAQPQA         LHAGRVEAAFRMAI   G GGGG              D+ +ARRLTVED+ADLWEWFEEFVEDL MDVAKVM +RAEHRAW RAH   AHEAAAA
Sbjct:  571 MQLARFQQRVLGNPGSARATFRAAVGDIPGSRELWLAFLEFEAAQPQA---------LHAGRVEAAFRMAI---GDGGGGTGAGGAKNTSGEENDDGDARRLTVEDRADLWEWFEEFVEDLCMDVAKVMSVRAEHRAWTRAHGTGAHEAAAA 710
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16634.3751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR95_ECTSI5.750e-4869.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..270
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 148..273
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 148..273
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 12..44
e-value: 0.0033
score: 26.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..148
e-value: 1.1E-8
score: 36.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16634contigH-paniculata_contig16634:2790..5180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16634.3751.1mRNA_H-paniculata_contig16634.3751.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16634 492..5637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16634.3751.1 ID=prot_H-paniculata_contig16634.3751.1|Name=mRNA_H-paniculata_contig16634.3751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MQLARFQHRIAGEPAAARTTFRAAVADIPGSRELWLAFLEFEAAQPQARR
SIYSSLALHAGRVEAAFRMAIEEEGSGGGGDNEEARRLTVEDKADLWEWF
EEFVEDLSMDVAKVMKMRAEHRAWIRAHSADAHEAAAAAAAGLGDGSSSK
ADYVTADQRDTTGNGYADAGERTRGQCGGGVRGGGAVTAGTMAVGGGGGG
TAGGGGIYAYAQQARDQWAAAYFHHQQRQGFQQQTGVAAEMQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQYSSAMPMPPHHQQQAFIFQQQYSPQGQPQS
QQQPHHQHHQQHPQKHGHSSWQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf