prot_H-paniculata_contig1663.3749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1663.3749.1
Unique Nameprot_H-paniculata_contig1663.3749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
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BLAST of mRNA_H-paniculata_contig1663.3749.1 vs. uniprot
Match: D8LLR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLR3_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 8.460e-57
Identity = 111/177 (62.71%), Postives = 132/177 (74.58%), Query Frame = 0 
Query:    1 MARFSALALLAVISSV-TAFVPSFAPANSITRSVSAQQPATCKPSVRMMAVEGAIAAP-TAESLKAMAEACQEDGCSVEAVSQLLDQLKSKKQELEMQLVTVDDVLTMMGDTSSLSEKGELEKLVMAVGRLFSPNDDDYPYLDYPTGWSGDISQDKKDAWDYNMNTPLKPVKPVYNK 175
            MARFSA A LA+ +S  TAFV   A      RS SA    T     RM A    + AP TA+ LK MA +CQEDGCSVE VS LL+QLK+KK+ELEMQLVTVDDVLT+MGD+SSL+EKGELEKLV AVGR+FS ND    Y+ +PTG+SG++++ +KDAWDYN+NTPLKPVKPVY K
Sbjct:    1 MARFSAFAFLAIFTSAATAFVTPLAGVQMGRRSASANVATT-----RMSASPAPMTAPPTAQELKDMALSCQEDGCSVETVSTLLNQLKTKKKELEMQLVTVDDVLTIMGDSSSLAEKGELEKLVEAVGRVFSTNDGT-DYIPFPTGYSGEVNKKQKDAWDYNVNTPLKPVKPVYKK 171
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BLAST of mRNA_H-paniculata_contig1663.3749.1 vs. uniprot
Match: A0A7S2KC78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC78_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.360e-6
Identity = 37/131 (28.24%), Postives = 65/131 (49.62%), Query Frame = 0 
Query:   49 AVEGAIAAPTAESLKAMAEACQEDGCSVEAVSQLLDQLKSKKQELEMQLVTVDDVLTMMG----DTSSLSEKGELEKLVMAVGRLF----SPNDDDYPYLDYPTGWSGDISQDKKDAWDYNMNTPLKPVKP 171
            A++G +    ++S+   A  C E  C+VE V   L +L+ ++  L  +L  V  +++ +G     T    +  E+ + V A+ R+F      +D+DYP +  P G++G+I    K A+D      L P KP
Sbjct:   31 AIQGLMTEEESKSIIDKAHLCAESECNVEDVDMFLSELREQQMMLRNRLAEVTGMISELGTVNESTGEERKVDEIRETVRAIARIFMMGDKNSDNDYPIMGPPLGYTGEIGDGPKTAYDV-----LSPKKP 156
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1663.3749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLR3_ECTSI8.460e-5762.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KC78_9STRA4.360e-628.24Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.894

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1663contigH-paniculata_contig1663:14635..20170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1663.3749.1mRNA_H-paniculata_contig1663.3749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1663 13072..20233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1663.3749.1 ID=prot_H-paniculata_contig1663.3749.1|Name=mRNA_H-paniculata_contig1663.3749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MARFSALALLAVISSVTAFVPSFAPANSITRSVSAQQPATCKPSVRMMAV
EGAIAAPTAESLKAMAEACQEDGCSVEAVSQLLDQLKSKKQELEMQLVTV
DDVLTMMGDTSSLSEKGELEKLVMAVGRLFSPNDDDYPYLDYPTGWSGDI
SQDKKDAWDYNMNTPLKPVKPVYNK*
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