mRNA_H-paniculata_contig1660.3742.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A6H5K8V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V8_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 1.310e-152 Identity = 232/279 (83.15%), Postives = 256/279 (91.76%), Query Frame = 1
Query: 235 MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGADFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIMDAR-QQAPMHVSTSNPTAQELAGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREARRVKRRGEEEK 1068
MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEG+I+DFKDERVCKA+LCGLCPHDLFSNTKQDLGACDY+HDEELKK+YE VAKG D+GYDK LE ILVNHIQE DKKISR+QRRLEEGGQGAMAMDT SLR NEEI+ +E+++SEIMKNAEAKGEEG+VDEAQELF++AEELQ+ KA LEAKALQ SIM+AR Q AP+H++TSNPTAQEL +TQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIR KL+SI KER R KR+ E+EK
Sbjct: 1 MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEGVIDDFKDERVCKAYLCGLCPHDLFSNTKQDLGACDYLHDEELKKQYEAAVAKGEDYGYDKHLESILVNHIQEVDKKISRSQRRLEEGGQGAMAMDTASLRNNEEIMKIEVQMSEIMKNAEAKGEEGDVDEAQELFEQAEELQRTKAELEAKALQDSIMEARAQSAPLHLATSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESIHKERAERLKKRQEEDEK 279
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: D8LL39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL39_ECTSI) HSP 1 Score: 315 bits (808), Expect = 1.600e-103 Identity = 159/188 (84.57%), Postives = 177/188 (94.15%), Query Frame = 1
Query: 235 MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGADFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQ 798
MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEG+++DFKDERVCKA+LCGLCPHDLFSNTKQDLGACDY+HDEELK++YE VAKG D+GYDK LE ILVNHIQE DKKISR+QRRLEEGGQGAMAMDT SLR NEEI+ +E+++SEIMKNAEAKGEEG+VDEAQELF++AEELQ+ KA LEAKALQ
Sbjct: 1 MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEGVVDDFKDERVCKAYLCGLCPHDLFSNTKQDLGACDYLHDEELKRQYEADVAKGEDYGYDKHLESILVNHIQEVDKKISRSQRRLEEGGQGAMAMDTASLRNNEEIMKMEVQMSEIMKNAEAKGEEGDVDEAQELFEQAEELQRTKAELEAKALQ 188
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A8K1CCH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCH2_PYTOL) HSP 1 Score: 221 bits (563), Expect = 6.310e-65 Identity = 132/267 (49.44%), Postives = 172/267 (64.42%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGADFGYDKELERILVNHIQEADKKISRAQRRLEE--GGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIM-DARQQAPMHVSTSNPTAQELAGSTQ------QKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREARR 1041
MD+QRALLDELMG NR+ D E I DF+D RVCK +LCGLCPHDLF NTK DLG C +H +LK YE + DFGY++ELE+ LV I + +KKISRAQ+RLEE G + MD + + E++ + ++ E+M+ AE G EGEVD + EL + EELQ +KA +A A+ S D R A + A + AG+ QKLRVCD+CGA LSIFDS+ RLA+HFGGKLH+G++ IR K++ I + R RR
Sbjct: 1 MDAQRALLDELMGRNRDGDKPEEEINDFRDSRVCKRYLCGLCPHDLFQNTKMDLGECAKLHLPKLKTAYEKE-RPSRDFGYEQELEKDLVKIISDVEKKISRAQKRLEEQDGERAPSLMDVENCK---EVLEITAEIQEVMEKAEEAGNEGEVDLSMELMAKVEELQMKKAEAQANAMLRSFRSDGRPAASATEGENGKPASDAAGAASSGPNVNQKLRVCDVCGAFLSIFDSDRRLADHFGGKLHLGYLQIRKKIEEIAEVRRERR 263
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A485KC95_9STRA (Aste57867_2639 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC95_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.160e-63 Identity = 123/260 (47.31%), Postives = 174/260 (66.92%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAK-GADFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIM----DARQQAPMHVSTSNPTAQELAGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKERE 1032
MD+QRALLDELMG NR+ D E I DF+D RVCK FLCGLCPHDLF NTK D+G C+ +H +LK Y+ + + G D+GY+ EL R L ++ + +KKISRAQ+RLEE GA A + N+E++ + +++++M+ AE G EGEVD + EL + E L+Q+K+ L+A ++ + DA Q M++ NP A + QKLRVCD+CGA LSIFDS+ RLA+HFGGK+H+G++ IR K+ + + +E
Sbjct: 1 MDAQRALLDELMGRNRDGDRPEEEITDFRDSRVCKRFLCGLCPHDLFQNTKMDMGECEKLHLPKLKLAYDNERQRSGRDYGYENELLRELERYVSDVEKKISRAQKRLEEQD-GARAPSLVGIETNKEVLEITAEIADLMQKAEDAGNEGEVDLSMELMAQVEVLKQKKSHLQANPSRSDAVVNDYDATQMHLMNLLPGNPLAMT---NVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKMHLGYMQIRKKIVEMKRAKE 256
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A2D4CIP8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIP8_PYTIN) HSP 1 Score: 220 bits (561), Expect = 7.590e-63 Identity = 133/268 (49.63%), Postives = 171/268 (63.81%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGA--DFGYDKELERILVNHIQEADKKISRAQRRLEE--GGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIMDARQQAPMHVSTSNPT------AQELAGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREARR 1041
MD+QRALLDELMG NR+ D E I +++D+RVCK FLCGLCPHDLF NTK DLG C +H +L YE A D GY+ ELE+ LV I + +KKI+RAQ+RLEE G + MD + + E++ + ++ E+M+ AE G EGEVD + EL Q+ EELQQ+KA +A A+ SI A AP + T A A S QKLRVCD+CGA LSIFDS+ RLA+HFGGKLH+G++ IR K+ I + R RR
Sbjct: 194 MDAQRALLDELMGKNRDGDRPEEEITNYRDKRVCKRFLCGLCPHDLFQNTKMDLGECAQLHLPKLLAAYESDKAANPNLDLGYEMELEKDLVKIISDVEKKIARAQKRLEEQDGERAPSLMDVENCK---EVLEITAEIQEVMQKAEEAGNEGEVDLSMELMQKVEELQQKKAEAQANAMIRSIRPA---APKETGENGDTDGAKSAADAKASSVNQKLRVCDVCGAFLSIFDSDRRLADHFGGKLHLGYLQIRKKITEIAETRRERR 455
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: K3W7R4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7R4_GLOUD) HSP 1 Score: 214 bits (545), Expect = 1.830e-62 Identity = 135/295 (45.76%), Postives = 177/295 (60.00%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGA--DFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKAL---------QASIMDARQQAPMHVS---------------TSNPTAQELAGS------TQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREARRVKRRG 1056
MD+QRALLDELMG NR+ D E I DF+ RVCK FLCGLCPHDLF NTK DLG C+ +H +++ +YE + + DFGY++ELER LV I E +KKI RAQRRLEE GA A +E++ + ++ E+M+ AE G EGEVD + EL + EEL+Q+KA+ +A A+ A+ DA A + T A+ L G+ QKLRVCD+CGA LSIFDS+ RLA+HFGGKLH+G++ IR K++ I R RR +R G
Sbjct: 1 MDAQRALLDELMGRNRDGDKPEEDISDFRHSRVCKRFLCGLCPHDLFQNTKMDLGECEQLHLPKMRIQYEKEKMEHPTKDFGYEQELERDLVKFISEVEKKIQRAQRRLEEQD-GAKAPSLMDFENCKEVLEITAEIQEVMQKAEEAGNEGEVDLSMELMNQVEELKQKKATAQANAMLNAFKSEAAAATAGDAGNTAVNGAAANDAXXXXTTNDNDNTEKTLAEVLPGNPLASTNVNQKLRVCDVCGAFLSIFDSDRRLADHFGGKLHLGYLQIRKKIEEIADARRERRRQRNG 294
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A067BJQ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BJQ2_SAPPC) HSP 1 Score: 210 bits (534), Expect = 6.230e-61 Identity = 129/270 (47.78%), Postives = 173/270 (64.07%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGA-DFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLE------------AKALQASIMDARQQAPMHVSTSNPTAQELAGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREAR 1038
MD+QRALLDELMG NR+ D + I DF+D+RVCK FLCGLCPHDLF NTK D+G C +H +LK YE AK D+GY+ +LER LV ++ + +KKISRA +RL+E GA + N+E++ + +++E+M+ AE G EGEVD + EL + E L+ +KA+L+ A AL + D Q M V NP A + QKLRVCD+CGA LSIFDS+ RLA+HFGGK+H+G++ IR K I++ REAR
Sbjct: 1 MDAQRALLDELMGRNRDGDKPQEDIRDFRDQRVCKRFLCGLCPHDLFQNTKMDMGECPKLHLPKLKLAYEEDRAKNQRDYGYEADLERELVRYVSDVEKKISRALKRLDEQD-GARVSSMLDIENNKEVLEITAEIAELMQKAEDAGNEGEVDLSMELMAKVEALKVKKAALQGVPSAVLASTAGADALMPEV-DVAQATLMAVLPGNPLAMT---NVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKMHLGYMQIRKK---IVEMREAR 262
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A7S2V537_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V537_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.060e-59 Identity = 120/240 (50.00%), Postives = 157/240 (65.42%), Query Frame = 1
Query: 310 NRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGADFGYDKELERILVNHIQEADKKISRAQRRLEE-GGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIMDARQQAPMHVSTSNPTA--QELAG-STQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSI 1017
NRN DN + + DF+DERVCK FL GLC HDLFSNTK DLG C VH + + +Y+ ++AKG D+GY +ELER L ++ E D KI R+QRRLEE G+GA+ + S E+I L ++S+ MK E GEEG+VD AQEL ++ EEL+QQK + K ++ +A Q + + L+G QKLRVCD+CGA LSI+DS+ RLA+HFGGKLH+GFV IR KL I
Sbjct: 1 NRNQDNPDAEVTDFRDERVCKKFLAGLCVHDLFSNTKMDLGQCPDVHADLMMDQYQKELAKGKDYGYTEELERCLEEYVMEVDGKIRRSQRRLEEEDGEGAVKLSAES---GAEMIKLTSQISDAMKEVEQAGEEGDVDRAQELMEKVEELKQQKIEAQTKLMR----EASGQPSLGGGGEGGESLVDSLSGREVNQKLRVCDVCGAFLSIYDSDRRLADHFGGKLHMGFVQIRQKLAEI 233
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: F0WNG5_9STRA (Uncharacterized protein AlNc14C170G7990 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WNG5_9STRA) HSP 1 Score: 207 bits (528), Expect = 5.450e-59 Identity = 123/271 (45.39%), Postives = 171/271 (63.10%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGADFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIMDARQQAPMH----VSTSNPTAQEL-------AGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKEREARRVK 1047
MD+QRALLDELMG NR+ D I+D++D RVCK FLCGLCPH+LF NTK DLG C +H L+ +YE K + GY+ ELER L+ I + DKKI RAQ+RLEE +G+ A + +E++ + ++ E+M AE G EG+VD + EL ++ E+L+Q+KA +A A+ S+ + P + + P EL + QKLRVCD+CGA LSIFDS+ RLA HFGGKLH+G++ IR K++ I + R+ +R K
Sbjct: 1 MDAQRALLDELMGRNRDGDKPNDEIKDYRDRRVCKYFLCGLCPHELFQNTKMDLGECPKLHIPNLRTKYEKDPKKSS--GYEYELERELLRFISDLDKKIYRAQKRLEEQ-EGSKAPSLMDVENCKEVLEITAEIQEVMLKAEEAGNEGQVDLSMELMEKVEDLKQKKADAQANAMLQSVQGVGARPPDYRKGGLEMKAPGLSELLPRNPLASTDVNQKLRVCDVCGAFLSIFDSDRRLANHFGGKLHLGYLQIRKKVEEIAELRQEQRRK 268
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Match: A0A1V9YWW9_9STRA (RNA-binding protein Luc7-like 2-like isoform X1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWW9_9STRA) HSP 1 Score: 204 bits (519), Expect = 9.850e-59 Identity = 123/265 (46.42%), Postives = 168/265 (63.40%), Query Frame = 1
Query: 268 MDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCGLCPHDLFSNTKQDLGACDYVHDEELKKEYEGQVAKGA-DFGYDKELERILVNHIQEADKKISRAQRRLEEGGQGAMAMDTGSLRQNEEIIALEIKVSEIMKNAEAKGEEGEVDEAQELFQEAEELQQQKASLEAKALQASIM----------DARQQAPMHVSTSNPTAQELAGSTQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRNKLDSILKER 1029
MD+QRALLDELMG NR+ D + I DF+D RVCK +LCGLCPHDLF NT+ DLG C +H +LK YE A+ D+GY+ ELER LV ++ + +KKI++A +RLEE GA + N+E++ L +++E+M+ AE G EGEVD + +L + E L+Q+KA+++ AS D Q M V NP A + QKLRVCD+CGA LSIFDS+ RLA+HFGGKLH+G++ IR K+ + + R
Sbjct: 1 MDAQRALLDELMGRNRDGDRPQEDIRDFRDARVCKRYLCGLCPHDLFQNTRLDLGDCPKLHLPKLKLAYEEDRARTKRDYGYEAELERELVRYVTDVEKKIAKALKRLEEQD-GARVTTLIDVENNKEVLQLTAEIAELMQKAEDAGNEGEVDLSLKLMAQIEVLKQKKAAMQGVTPSASASTSGEAIISEYDIAQLNLMQVLPGNPLAMT---NVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKLHLGYMQIRKKIQEMRESR 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1660.3742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1660.3742.1 >prot_H-paniculata_contig1660.3742.1 ID=prot_H-paniculata_contig1660.3742.1|Name=mRNA_H-paniculata_contig1660.3742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp MGKWRDSKPSQMDSQRALLDELMGVNRNLDNEEGIIEDFKDERVCKAFLCback to top mRNA from alignment at H-paniculata_contig1660:3643..11777- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1660.3742.1 ID=mRNA_H-paniculata_contig1660.3742.1|Name=mRNA_H-paniculata_contig1660.3742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8135bp|location=Sequence derived from alignment at H-paniculata_contig1660:3643..11777- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1660:3643..11777- >mRNA_H-paniculata_contig1660.3742.1 ID=mRNA_H-paniculata_contig1660.3742.1|Name=mRNA_H-paniculata_contig1660.3742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig1660:3643..11777- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |