prot_H-paniculata_contig1659.3737.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1659.3737.1
Unique Nameprot_H-paniculata_contig1659.3737.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length600
Homology
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: D8LNH6_ECTSI (RNA polymerase sigma factor SigD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH6_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.010e-67
Identity = 158/366 (43.17%), Postives = 208/366 (56.83%), Query Frame = 0
Query:   23 QAQILKERRLGQLVQESIRLTKMKQCLEEDLGE-QISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDY--KGGEXXXXXXANH--MRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGL-NLSEVTALAETSMRKLRGGTLPEERAKLMSYLSMYEP 382
            QA+  KE  LG  +Q  ++L K+K  L+   GE ++S EVWA+ A +S +SL+Q L  G++A+  LV  NL LV  IV  Y    A G          +FT  DL Q+AT+GLI AVEKFDP KGF F TY +WWVRKYL+E +QN NR++RIP   A+RI++V    ++L  +L RAPT  E+A+ T  TV QVEACLEQ +F +  LD  +G                        GF + D V +  +   EG   G D     GE           ++  LR DLS+A  RLLD  E++CLVLRYGL DGVT + ++   IM   +  +V  +   +M KLR G LPEER KLMSYLS+YEP
Sbjct:   49 QARRDKEYELGTKIQRMMKLLKLKDVLQPAAGEDEVSSEVWAEGAMESVESLRQALDEGEKAKQELVLDNLNLVDIIVKNYVGTFAYG----------RFTEKDLTQDATVGLIRAVEKFDPEKGFFFATYGRWWVRKYLHEGVQNHNRMVRIPNSAAYRIAKVKRVRDELEGELGRAPTKPEIALETDLTVQQVEACLEQDSFRIERLDGYMGH-----------------------GFGMADTVFA--SHFGEGFLYGSDMLTHPGETPAPTVEGEKVIQSSLRGDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEQTAAIMDFCDPDDVRIITTQAMAKLRDGCLPEERKKLMSYLSVYEP 379          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: UPI000EFC7652 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI000EFC7652)

HSP 1 Score: 145 bits (367), Expect = 1.750e-35
Identity = 103/342 (30.12%), Postives = 164/342 (47.95%), Query Frame = 0
Query:   32 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR--GGTLPEERA 371
            LG+ VQ+ ++L + K  L E +G+  S  VWA++   S + LQ+ +++G  AR  +V  NL LV ++   Y               G      DL+QE T+GL   VEKFDP KG+RF TYA WW+R+ +   + N +R+IR+P +   ++ ++  A  QL+  L R  T++E+A     +V ++    EQG   + SLD  IGS+                         L  L+  +G    E       Y              R  L+ DLS  LS+ L ++++  + +R+GL+ G   T  +VG  MG++   V  +  +++RKLR  G +L E  A
Sbjct:   32 LGKKVQKYMKLEEAKSDLVESMGDTPSPAVWAESTALSTEELQRAVEVGQRARAKMVRSNLRLVVSVAKKY--------------AGHSLEMMDLIQEGTIGLHRGVEKFDPGKGYRFSTYAYWWIRQAITRSISNNSRVIRLPIHIGDKLRKMRKAQRQLSQSLGRPATVKEVASEMSLSVEKLRELQEQGRRPL-SLDMKIGSEQ---------------------NTELGALLEDEGILPEE-------YA------------TRNLLKNDLSQLLSKTLSEQQRAVIRMRFGLDTGSKMTLHQVGDSMGISRERVRQVERSALRKLRQRGASLKEYAA 318          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: Q7NEW6_GLOVI (RNA polymerase sigma factor n=4 Tax=Gloeobacterales TaxID=307595 RepID=Q7NEW6_GLOVI)

HSP 1 Score: 145 bits (365), Expect = 8.440e-35
Identity = 105/354 (29.66%), Postives = 168/354 (47.46%), Query Frame = 0
Query:   32 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYW-RGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDD---REKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLSMYE 381
            L Q VQ+ ++LT +K+ L+  LG + S E WA+AA      L++ +  G  A+  ++E NL LV ++   Y  RG+                  DL+QE T+GL  AVEKFDPTKG+RF TYA WW+R+ +   +  Q+R IR+P +   +++R+     +L+ +L R PT+ E+A         V   + +   SV SL+  +G                           L +L+ ++  +  E                   + +++ LR D+      LLDD   RE+  + +RYGL DG T +  E+GR + L+   V  +   +++KLR    P  RAK+  YL + E
Sbjct:   72 LAQQVQKLMKLTALKESLQTSLGSEYSDEQWAEAAKVGLFELKRQVLAGSRAKKKMIEANLRLVVSVAKKYQNRGLEL---------------LDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHITEKLNRIKKTQRKLSQNLGRTPTISEIAEELEMEPAHVRELMSRVPRSV-SLETRVGKDKD---------------------TELGELLEAEEVSPEE-------------------SAVQESLRRDVK----ELLDDLTLRERDVITMRYGLLDGRTYSLSEIGRALDLSRERVRQIESKALQKLRQ---PRRRAKVRDYLELME 362          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A2N5JN07_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JN07_9CYAN)

HSP 1 Score: 144 bits (362), Expect = 1.040e-34
Identity = 104/350 (29.71%), Postives = 163/350 (46.57%), Query Frame = 0
Query:   29 ERRLGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLS 378
            E RLG+ V++ + L  +++ L + LG   + E WA+AA  + K+L+  LKLG  A+  ++E NL LV ++   Y +                    DL+QE T+GL  AV+KFDPTKGF+F TYA WW+R+ +   +  Q R IR+P +   +++++  A  QL+  L R  T  E+A        QV  CL      V SLD  IG                           L +L+  DGA+         D+             + + LR  +   LS L   R++Q ++LRYGLEDG   +   + + + L+  +V  L   +M  LR     + +A++  YL+
Sbjct:   39 EIRLGKQVKQMMDLFALQESLADRLGRMPTDEEWAEAANMTPKALEAALKLGSRAKTKMIEANLRLVVSVAKKYQK--------------RNLELLDLVQEGTLGLERAVDKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPVHITEKLNKIKKAQRQLSQSLGRVATALEVANFLEIKPEQVRECLSLSRQPV-SLDLRIGDNQD---------------------TELAELLEDDGASPE-------DFA------------VSESLRDSIQELLSELTP-RQRQVMILRYGLEDGQELSLASISKRLDLSREQVRQLERQAMDSLR-----KRKARMREYLA 327          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6I5N2M8_9CYAN (RpoD/SigA family RNA polymerase sigma factor n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5N2M8_9CYAN)

HSP 1 Score: 143 bits (361), Expect = 1.140e-34
Identity = 101/330 (30.61%), Postives = 154/330 (46.67%), Query Frame = 0
Query:   33 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 362
            G+ VQ  + L   +  L E  G+  S+  WAQ AG S ++LQQ ++ G  A+  +VE NL LV +I   Y +              +     DL+QE T+GL    EKFDPTKG+RF TYA WW+R+ +   +  Q R IR+P + + ++ ++  A  QLT  L R+ T+ ELA +    V +V   LE+    V SLD  IG                           L DL+        +  P   DY              +Q L+ DL++ +S L    ++  L LR+GLEDGV  T  ++G  + ++   V  +   ++++LR
Sbjct:   33 GKAVQRLVALEAERASLSEQRGQSPSLAEWAQQAGLSVEALQQVIQQGQRAKRKMVESNLRLVVSIAKKYLK--------------SNLEMLDLIQEGTIGLQRGAEKFDPTKGYRFSTYAYWWIRQAMTRAIAEQGRAIRLPIHMSEKLYKIKQAQRQLTQTLGRSATVAELAESVNLPVEKVRDYLEKSR-KVMSLDIRIGDDE---------------------NSELGDLLQ-------DSRPLPSDYV------------AQQLLKDDLASLMSELTQQ-QQAVLALRFGLEDGVPHTLAKIGEQLNVSRERVRQVEREALKRLR 306          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: Q10XF4_TRIEI (RNA polymerase, sigma 28 subunit n=20 Tax=Oscillatoriales TaxID=1150 RepID=Q10XF4_TRIEI)

HSP 1 Score: 143 bits (361), Expect = 1.160e-34
Identity = 98/330 (29.70%), Postives = 152/330 (46.06%), Query Frame = 0
Query:   33 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 362
            G+ VQ    L +  Q L E LG + ++  WA+A   S   LQ+ ++ G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++     QLT  L R+ T  E+A   G T  Q+  CLE+    + SLD  +G                           L DL+   GA+         DY             ++  +RTDL + +  L    +KQ L LR+GLEDG T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQRLTALQEFNQTLAEALGREPTLLEWAEAKELSKSELQRIIREGERAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQQLGRSATTGEIAEELGLTPKQIRECLERARLPL-SLDLRVGDNQD---------------------TELGDLLEDTGASPE-------DYA------------LQSSMRTDLESIMVDLTPQ-QKQVLALRFGLEDGQTMTLSKIGAHLNISRERVRQIEREALSKLR 307          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6P0T449_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T449_9CYAN)

HSP 1 Score: 143 bits (361), Expect = 1.160e-34
Identity = 98/331 (29.61%), Postives = 155/331 (46.83%), Query Frame = 0
Query:   32 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 362
            LG+ VQ   +L  M+  +E++ GE +S+E WAQ A  +   LQQT+  G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDP+KG+RF TYA WW+R+ +   +  + R IR+P +   +++++     QL     R+ ++EE+A     T  Q+   LE+    + SLD  +G                           L DL+  DG +  E                  A H   +LR+ LS  +S L    +++ L LR+GLEDG T T  ++G  M ++   V  +   ++ KLR
Sbjct:   33 LGKQVQALTKLVAMRISVEDESGESLSLEQWAQVADVTVSELQQTVATGEAAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLAQQYGRSASVEEIATEMKLTTKQIRDYLERSRLPL-SLDIRVGDNQD---------------------TELGDLLEDDGQSPEE-----------------YAAHA--DLRSQLSQLISDLTPQ-QREVLSLRFGLEDGKTMTLAKIGSRMQISRERVRQIEREALTKLR 307          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0YTG7_LYNSP (RNA polymerase sigma factor n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0YTG7_LYNSP)

HSP 1 Score: 143 bits (361), Expect = 1.160e-34
Identity = 100/330 (30.30%), Postives = 155/330 (46.97%), Query Frame = 0
Query:   33 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 362
            G+ VQ+S  L + K+ L + LG + S   WA+ AG S K L+Q L+ G  A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++  A   L  DL RA T+ ELA        Q+   LE+    + SLD  +G                           L DL+  DGA+         DY             ++  +R+DL   ++ L D  ++Q L LR+GLE+G T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQQSAILQEGKEKLAKRLGREPSYAEWAENAGVSLKELKQALEDGQTAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRSLAQDLGRAATIAELADELDLNPKQIREYLERARLPL-SLDLRVGDNQD---------------------TELGDLLEDDGASPE-------DYA------------LQSSMRSDLEVLMADLTDQ-QRQVLALRFGLENGQTMTLAKIGDRLNISRERVRQIEREALTKLR 307          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: K9VD31_9CYAN (RNA polymerase, sigma 70 subunit, RpoD subfamily n=16 Tax=Cyanobacteria TaxID=1117 RepID=K9VD31_9CYAN)

HSP 1 Score: 141 bits (356), Expect = 5.720e-34
Identity = 98/330 (29.70%), Postives = 150/330 (45.45%), Query Frame = 0
Query:   33 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 362
            G+ VQ S  L + K  L E+LG   +   WAQA G S   LQ+T++ G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++  A  QL   L RA T  ELA     T  Q+   L++    + SLD  +G                           L DL+   G           D+             ++  LRTDL   ++ L    +++ L LR+GLEDG T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQRSTALHQEKNILAEELGRDPTAAEWAQAVGLSEAQLQRTIEQGERAKRQMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQQLGRAATAAELASELELTPKQIREYLDRARLPL-SLDLRVGDNQD---------------------TELGDLLEDTGTTPE-------DFA------------LQSSLRTDLDQLMAELTQQ-QREVLALRFGLEDGQTLTLAKIGDRLNISRERVRQIEREALTKLR 307          
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6P2ATU7_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Spirulina sp. DLM2.Bin59 TaxID=2480215 RepID=A0A6P2ATU7_9CYAN)

HSP 1 Score: 140 bits (353), Expect = 1.450e-33
Identity = 102/347 (29.39%), Postives = 160/347 (46.11%), Query Frame = 0
Query:   32 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLS 378
            L + VQ++I L  +K   E + GE +S+  WAQ A  +   LQ+TL  G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  ++R IR+P +   +++++  A  QL+  L RA T+ EL      T  QV   LE+    + SLD  +G                           L +L+  DG +         DY              +  L+ DL+  ++ L    +++ L LRYGL DG   T  ++G  +G++   V  L   S++KLR     + R  +  YL+
Sbjct:   32 LAKRVQKAIALENLKADHEAETGEPLSLGAWAQLADLTELELQRTLDAGEVAKRKMVEANLRLVVSVAKKYIK--------------RNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQQLGRAATMAELGKELDLTPKQVRDYLEKSRHPL-SLDLRVGDNQD---------------------TELGELLEDDGLSPE-------DYA------------TQASLQGDLAKLMAELTPQ-QREVLTLRYGLTDGQPLTLAKIGTRLGISRERVRQLERESLKKLR-----QRRVAVQEYLA 317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH6_ECTSI2.010e-6743.17RNA polymerase sigma factor SigD n=2 Tax=Ectocarpu... [more]
UPI000EFC76521.750e-3530.12RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
Q7NEW6_GLOVI8.440e-3529.66RNA polymerase sigma factor n=4 Tax=Gloeobacterale... [more]
A0A2N5JN07_9CYAN1.040e-3429.71RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A6I5N2M8_9CYAN1.140e-3430.61RpoD/SigA family RNA polymerase sigma factor n=1 T... [more]
Q10XF4_TRIEI1.160e-3429.70RNA polymerase, sigma 28 subunit n=20 Tax=Oscillat... [more]
A0A6P0T449_9CYAN1.160e-3429.61RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0YTG7_LYNSP1.160e-3430.30RNA polymerase sigma factor n=3 Tax=Oscillatoriale... [more]
K9VD31_9CYAN5.720e-3429.70RNA polymerase, sigma 70 subunit, RpoD subfamily n... [more]
A0A6P2ATU7_9CYAN1.450e-3329.39RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 335..350
score: 29.07
coord: 125..138
score: 54.52
coord: 350..361
score: 24.03
coord: 149..157
score: 62.08
coord: 314..326
score: 39.85
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 82..362
e-value: 2.5E-19
score: 67.5
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 314..362
e-value: 3.7E-6
score: 26.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 296..383
e-value: 9.6E-10
score: 40.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 171..222
e-value: 1.9E-8
score: 36.2
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 92..162
e-value: 1.2E-9
score: 37.8
NoneNo IPR availableGENE3D1.20.120.1810coord: 12..170
e-value: 3.1E-26
score: 94.7
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 28..377
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 28..377
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 182..228
e-value: 6.9E-7
score: 29.3
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 29..170
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 174..238
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 295..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1659contigH-paniculata_contig1659:15665..21938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1659.3737.1mRNA_H-paniculata_contig1659.3737.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1659 14335..22699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1659.3737.1 ID=prot_H-paniculata_contig1659.3737.1|Name=mRNA_H-paniculata_contig1659.3737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=600bp
MPKRPFVVYTGPAKSAKPTAVVQAQILKERRLGQLVQESIRLTKMKQCLE
EDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVS
TYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFC
TYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAP
TLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSGRSGGGE
GSSDGSHGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEEGHDGGANHMRQ
ELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEV
TALAETSMRKLRGGTLPEERAKLMSYLSMYEPDYLPLSLGGSSGSSRSIN
GGVKDVDVGSKPTSGYYHDSHVGYDDDMLRDPCETVKLEEELARYLRARG
ITKDFSRRNDDDYGEPSMEELNLGSDRIPEPRENRAFKLDYDEEDEEVGA
KMGNKKGWSKDALAKDGGGVKVISGSRSGKHGNSGGGVWDGGVAGAQTGM
DVDNPRAKFIGEAEPRPNSREAMQLEHLSRLLFDGEEPEDFVFGQSTLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR014284RNA_pol_sigma-70_dom
IPR007630RNA_pol_sigma70_r4
IPR036388WH-like_DNA-bd_sf
IPR007627RNA_pol_sigma70_r2
IPR007624RNA_pol_sigma70_r3
IPR013325RNA_pol_sigma_r2
IPR013324RNA_pol_sigma_r3/r4-like