mRNA_H-paniculata_contig1659.3737.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1659.3737.1
Unique NamemRNA_H-paniculata_contig1659.3737.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: D8LNH6_ECTSI (RNA polymerase sigma factor SigD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH6_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 4.620e-64
Identity = 158/366 (43.17%), Postives = 208/366 (56.83%), Query Frame = 3 
Query:  972 QAQILKERRLGQLVQESIRLTKMKQCLEEDLGE-QISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDY--KGGEXXXXXXANH--MRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGL-NLSEVTALAETSMRKLRGGTLPEERAKLMSYLSMYEP 2051
            QA+  KE  LG  +Q  ++L K+K  L+   GE ++S EVWA+ A +S +SL+Q L  G++A+  LV  NL LV  IV  Y    A G          +FT  DL Q+AT+GLI AVEKFDP KGF F TY +WWVRKYL+E +QN NR++RIP   A+RI++V    ++L  +L RAPT  E+A+ T  TV QVEACLEQ +F +  LD  +G                        GF + D V +  +   EG   G D     GE           ++  LR DLS+A  RLLD  E++CLVLRYGL DGVT + ++   IM   +  +V  +   +M KLR G LPEER KLMSYLS+YEP
Sbjct:   49 QARRDKEYELGTKIQRMMKLLKLKDVLQPAAGEDEVSSEVWAEGAMESVESLRQALDEGEKAKQELVLDNLNLVDIIVKNYVGTFAYG----------RFTEKDLTQDATVGLIRAVEKFDPEKGFFFATYGRWWVRKYLHEGVQNHNRMVRIPNSAAYRIAKVKRVRDELEGELGRAPTKPEIALETDLTVQQVEACLEQDSFRIERLDGYMGH-----------------------GFGMADTVFA--SHFGEGFLYGSDMLTHPGETPAPTVEGEKVIQSSLRGDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEQTAAIMDFCDPDDVRIITTQAMAKLRDGCLPEERKKLMSYLSVYEP 379
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: UPI000EFC7652 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI000EFC7652)

HSP 1 Score: 145 bits (367), Expect = 1.130e-34
Identity = 103/342 (30.12%), Postives = 164/342 (47.95%), Query Frame = 3 
Query:  999 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR--GGTLPEERA 2018
            LG+ VQ+ ++L + K  L E +G+  S  VWA++   S + LQ+ +++G  AR  +V  NL LV ++   Y               G      DL+QE T+GL   VEKFDP KG+RF TYA WW+R+ +   + N +R+IR+P +   ++ ++  A  QL+  L R  T++E+A     +V ++    EQG   + SLD  IGS+                         L  L+  +G    E       Y              R  L+ DLS  LS+ L ++++  + +R+GL+ G   T  +VG  MG++   V  +  +++RKLR  G +L E  A
Sbjct:   32 LGKKVQKYMKLEEAKSDLVESMGDTPSPAVWAESTALSTEELQRAVEVGQRARAKMVRSNLRLVVSVAKKY--------------AGHSLEMMDLIQEGTIGLHRGVEKFDPGKGYRFSTYAYWWIRQAITRSISNNSRVIRLPIHIGDKLRKMRKAQRQLSQSLGRPATVKEVASEMSLSVEKLRELQEQGRRPL-SLDMKIGSEQ---------------------NTELGALLEDEGILPEE-------YA------------TRNLLKNDLSQLLSKTLSEQQRAVIRMRFGLDTGSKMTLHQVGDSMGISRERVRQVERSALRKLRQRGASLKEYAA 318
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: Q7NEW6_GLOVI (RNA polymerase sigma factor n=4 Tax=Gloeobacterales TaxID=307595 RepID=Q7NEW6_GLOVI)

HSP 1 Score: 145 bits (365), Expect = 5.490e-34
Identity = 105/354 (29.66%), Postives = 168/354 (47.46%), Query Frame = 3 
Query:  999 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYW-RGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDD---REKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLSMYE 2048
            L Q VQ+ ++LT +K+ L+  LG + S E WA+AA      L++ +  G  A+  ++E NL LV ++   Y  RG+                  DL+QE T+GL  AVEKFDPTKG+RF TYA WW+R+ +   +  Q+R IR+P +   +++R+     +L+ +L R PT+ E+A         V   + +   SV SL+  +G                           L +L+ ++  +  E                   + +++ LR D+      LLDD   RE+  + +RYGL DG T +  E+GR + L+   V  +   +++KLR    P  RAK+  YL + E
Sbjct:   72 LAQQVQKLMKLTALKESLQTSLGSEYSDEQWAEAAKVGLFELKRQVLAGSRAKKKMIEANLRLVVSVAKKYQNRGLEL---------------LDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHITEKLNRIKKTQRKLSQNLGRTPTISEIAEELEMEPAHVRELMSRVPRSV-SLETRVGKDKD---------------------TELGELLEAEEVSPEE-------------------SAVQESLRRDVK----ELLDDLTLRERDVITMRYGLLDGRTYSLSEIGRALDLSRERVRQIESKALQKLRQ---PRRRAKVRDYLELME 362
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A2N5JN07_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JN07_9CYAN)

HSP 1 Score: 144 bits (362), Expect = 6.300e-34
Identity = 104/350 (29.71%), Postives = 163/350 (46.57%), Query Frame = 3 
Query:  990 ERRLGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLS 2039
            E RLG+ V++ + L  +++ L + LG   + E WA+AA  + K+L+  LKLG  A+  ++E NL LV ++   Y +                    DL+QE T+GL  AV+KFDPTKGF+F TYA WW+R+ +   +  Q R IR+P +   +++++  A  QL+  L R  T  E+A        QV  CL      V SLD  IG                           L +L+  DGA+         D+             + + LR  +   LS L   R++Q ++LRYGLEDG   +   + + + L+  +V  L   +M  LR     + +A++  YL+
Sbjct:   39 EIRLGKQVKQMMDLFALQESLADRLGRMPTDEEWAEAANMTPKALEAALKLGSRAKTKMIEANLRLVVSVAKKYQK--------------RNLELLDLVQEGTLGLERAVDKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPVHITEKLNKIKKAQRQLSQSLGRVATALEVANFLEIKPEQVRECLSLSRQPV-SLDLRIGDNQD---------------------TELAELLEDDGASPE-------DFA------------VSESLRDSIQELLSELTP-RQRQVMILRYGLEDGQELSLASISKRLDLSREQVRQLERQAMDSLR-----KRKARMREYLA 327
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6I5N2M8_9CYAN (RpoD/SigA family RNA polymerase sigma factor n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5N2M8_9CYAN)

HSP 1 Score: 143 bits (361), Expect = 6.740e-34
Identity = 101/330 (30.61%), Postives = 154/330 (46.67%), Query Frame = 3 
Query: 1002 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 1991
            G+ VQ  + L   +  L E  G+  S+  WAQ AG S ++LQQ ++ G  A+  +VE NL LV +I   Y +              +     DL+QE T+GL    EKFDPTKG+RF TYA WW+R+ +   +  Q R IR+P + + ++ ++  A  QLT  L R+ T+ ELA +    V +V   LE+    V SLD  IG                           L DL+        +  P   DY              +Q L+ DL++ +S L    ++  L LR+GLEDGV  T  ++G  + ++   V  +   ++++LR
Sbjct:   33 GKAVQRLVALEAERASLSEQRGQSPSLAEWAQQAGLSVEALQQVIQQGQRAKRKMVESNLRLVVSIAKKYLK--------------SNLEMLDLIQEGTIGLQRGAEKFDPTKGYRFSTYAYWWIRQAMTRAIAEQGRAIRLPIHMSEKLYKIKQAQRQLTQTLGRSATVAELAESVNLPVEKVRDYLEKSR-KVMSLDIRIGDDE---------------------NSELGDLLQ-------DSRPLPSDYV------------AQQLLKDDLASLMSELTQQ-QQAVLALRFGLEDGVPHTLAKIGEQLNVSRERVRQVEREALKRLR 306
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: Q10XF4_TRIEI (RNA polymerase, sigma 28 subunit n=20 Tax=Oscillatoriales TaxID=1150 RepID=Q10XF4_TRIEI)

HSP 1 Score: 143 bits (361), Expect = 6.900e-34
Identity = 98/330 (29.70%), Postives = 152/330 (46.06%), Query Frame = 3 
Query: 1002 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 1991
            G+ VQ    L +  Q L E LG + ++  WA+A   S   LQ+ ++ G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++     QLT  L R+ T  E+A   G T  Q+  CLE+    + SLD  +G                           L DL+   GA+         DY             ++  +RTDL + +  L    +KQ L LR+GLEDG T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQRLTALQEFNQTLAEALGREPTLLEWAEAKELSKSELQRIIREGERAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQQLGRSATTGEIAEELGLTPKQIRECLERARLPL-SLDLRVGDNQD---------------------TELGDLLEDTGASPE-------DYA------------LQSSMRTDLESIMVDLTPQ-QKQVLALRFGLEDGQTMTLSKIGAHLNISRERVRQIEREALSKLR 307
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6P0T449_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T449_9CYAN)

HSP 1 Score: 143 bits (361), Expect = 6.900e-34
Identity = 98/331 (29.61%), Postives = 155/331 (46.83%), Query Frame = 3 
Query:  999 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 1991
            LG+ VQ   +L  M+  +E++ GE +S+E WAQ A  +   LQQT+  G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDP+KG+RF TYA WW+R+ +   +  + R IR+P +   +++++     QL     R+ ++EE+A     T  Q+   LE+    + SLD  +G                           L DL+  DG +  E                  A H   +LR+ LS  +S L    +++ L LR+GLEDG T T  ++G  M ++   V  +   ++ KLR
Sbjct:   33 LGKQVQALTKLVAMRISVEDESGESLSLEQWAQVADVTVSELQQTVATGEAAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLAQQYGRSASVEEIATEMKLTTKQIRDYLERSRLPL-SLDIRVGDNQD---------------------TELGDLLEDDGQSPEE-----------------YAAHA--DLRSQLSQLISDLTPQ-QREVLSLRFGLEDGKTMTLAKIGSRMQISRERVRQIEREALTKLR 307
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0YTG7_LYNSP (RNA polymerase sigma factor n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0YTG7_LYNSP)

HSP 1 Score: 143 bits (361), Expect = 6.900e-34
Identity = 100/330 (30.30%), Postives = 155/330 (46.97%), Query Frame = 3 
Query: 1002 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 1991
            G+ VQ+S  L + K+ L + LG + S   WA+ AG S K L+Q L+ G  A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++  A   L  DL RA T+ ELA        Q+   LE+    + SLD  +G                           L DL+  DGA+         DY             ++  +R+DL   ++ L D  ++Q L LR+GLE+G T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQQSAILQEGKEKLAKRLGREPSYAEWAENAGVSLKELKQALEDGQTAKRKMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRSLAQDLGRAATIAELADELDLNPKQIREYLERARLPL-SLDLRVGDNQD---------------------TELGDLLEDDGASPE-------DYA------------LQSSMRSDLEVLMADLTDQ-QRQVLALRFGLENGQTMTLAKIGDRLNISRERVRQIEREALTKLR 307
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: K9VD31_9CYAN (RNA polymerase, sigma 70 subunit, RpoD subfamily n=16 Tax=Cyanobacteria TaxID=1117 RepID=K9VD31_9CYAN)

HSP 1 Score: 141 bits (356), Expect = 3.170e-33
Identity = 98/330 (29.70%), Postives = 150/330 (45.45%), Query Frame = 3 
Query: 1002 GQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLR 1991
            G+ VQ S  L + K  L E+LG   +   WAQA G S   LQ+T++ G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  + R IR+P +   +++++  A  QL   L RA T  ELA     T  Q+   L++    + SLD  +G                           L DL+   G           D+             ++  LRTDL   ++ L    +++ L LR+GLEDG T T  ++G  + ++   V  +   ++ KLR
Sbjct:   34 GKQVQRSTALHQEKNILAEELGRDPTAAEWAQAVGLSEAQLQRTIEQGERAKRQMVEANLRLVVSVAKKYIK--------------RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQQLGRAATAAELASELELTPKQIREYLDRARLPL-SLDLRVGDNQD---------------------TELGDLLEDTGTTPE-------DFA------------LQSSLRTDLDQLMAELTQQ-QREVLALRFGLEDGQTLTLAKIGDRLNISRERVRQIEREALTKLR 307
[Close]
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Match: A0A6P2ATU7_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Spirulina sp. DLM2.Bin59 TaxID=2480215 RepID=A0A6P2ATU7_9CYAN)

HSP 1 Score: 140 bits (353), Expect = 7.720e-33
Identity = 102/347 (29.39%), Postives = 160/347 (46.11%), Query Frame = 3 
Query:  999 LGQLVQESIRLTKMKQCLEEDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVSTYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFCTYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAPTLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSXXXXXXXXXXXXXXGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEXXXXXXANHMRQELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEVTALAETSMRKLRGGTLPEERAKLMSYLS 2039
            L + VQ++I L  +K   E + GE +S+  WAQ A  +   LQ+TL  G+ A+  +VE NL LV ++   Y +                    DL+QE T+G+   VEKFDPTKG+RF TYA WW+R+ +   +  ++R IR+P +   +++++  A  QL+  L RA T+ EL      T  QV   LE+    + SLD  +G                           L +L+  DG +         DY              +  L+ DL+  ++ L    +++ L LRYGL DG   T  ++G  +G++   V  L   S++KLR     + R  +  YL+
Sbjct:   32 LAKRVQKAIALENLKADHEAETGEPLSLGAWAQLADLTELELQRTLDAGEVAKRKMVEANLRLVVSVAKKYIK--------------RNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQQLGRAATMAELGKELDLTPKQVRDYLEKSRHPL-SLDLRVGDNQD---------------------TELGELLEDDGLSPE-------DYA------------TQASLQGDLAKLMAELTPQ-QREVLTLRYGLTDGQPLTLAKIGTRLGISRERVRQLERESLKKLR-----QRRVAVQEYLA 317
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1659.3737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH6_ECTSI4.620e-6443.17RNA polymerase sigma factor SigD n=2 Tax=Ectocarpu... [more]
UPI000EFC76521.130e-3430.12RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
Q7NEW6_GLOVI5.490e-3429.66RNA polymerase sigma factor n=4 Tax=Gloeobacterale... [more]
A0A2N5JN07_9CYAN6.300e-3429.71RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A6I5N2M8_9CYAN6.740e-3430.61RpoD/SigA family RNA polymerase sigma factor n=1 T... [more]
Q10XF4_TRIEI6.900e-3429.70RNA polymerase, sigma 28 subunit n=20 Tax=Oscillat... [more]
A0A6P0T449_9CYAN6.900e-3429.61RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0YTG7_LYNSP6.900e-3430.30RNA polymerase sigma factor n=3 Tax=Oscillatoriale... [more]
K9VD31_9CYAN3.170e-3329.70RNA polymerase, sigma 70 subunit, RpoD subfamily n... [more]
A0A6P2ATU7_9CYAN7.720e-3329.39RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1659contigH-paniculata_contig1659:14335..22699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue6.3e-63
Seed eggNOG ortholog2880.D8LNH6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sigma-70 region 2
EggNOG OGs2SJXU@2759,COG0568@1
Ec32 ortholog descriptionRNA polymerase sigma-70 like domain
Ec32 orthologEc-04_003820.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size3466
Cds size1800
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929317.3781788-UTR-H-paniculata_contig1659:14334..151451622929317.3781788-UTR-H-paniculata_contig1659:14334..15145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 14335..15145 +
1691480813.218457-UTR-H-paniculata_contig1659:14334..151451691480813.218457-UTR-H-paniculata_contig1659:14334..15145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 14335..15145 +
1622929317.390372-UTR-H-paniculata_contig1659:15170..152091622929317.390372-UTR-H-paniculata_contig1659:15170..15209Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 15171..15209 +
1691480813.2294436-UTR-H-paniculata_contig1659:15170..152091691480813.2294436-UTR-H-paniculata_contig1659:15170..15209Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 15171..15209 +
1622929317.4026942-UTR-H-paniculata_contig1659:15609..156641622929317.4026942-UTR-H-paniculata_contig1659:15609..15664Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 15610..15664 +
1691480813.237136-UTR-H-paniculata_contig1659:15609..156641691480813.237136-UTR-H-paniculata_contig1659:15609..15664Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 15610..15664 +
1622929317.4861975-UTR-H-paniculata_contig1659:21938..226991622929317.4861975-UTR-H-paniculata_contig1659:21938..22699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 21939..22699 +
1691480813.3013518-UTR-H-paniculata_contig1659:21938..226991691480813.3013518-UTR-H-paniculata_contig1659:21938..22699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1659 21939..22699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929317.4145014-CDS-H-paniculata_contig1659:15664..157691622929317.4145014-CDS-H-paniculata_contig1659:15664..15769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 15665..15769 +
1691480813.2467804-CDS-H-paniculata_contig1659:15664..157691691480813.2467804-CDS-H-paniculata_contig1659:15664..15769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 15665..15769 +
1622929317.430276-CDS-H-paniculata_contig1659:17575..177321622929317.430276-CDS-H-paniculata_contig1659:17575..17732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 17576..17732 +
1691480813.2675343-CDS-H-paniculata_contig1659:17575..177321691480813.2675343-CDS-H-paniculata_contig1659:17575..17732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 17576..17732 +
1622929317.4460633-CDS-H-paniculata_contig1659:18087..183771622929317.4460633-CDS-H-paniculata_contig1659:18087..18377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 18088..18377 +
1691480813.2762148-CDS-H-paniculata_contig1659:18087..183771691480813.2762148-CDS-H-paniculata_contig1659:18087..18377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 18088..18377 +
1622929317.463707-CDS-H-paniculata_contig1659:19536..200311622929317.463707-CDS-H-paniculata_contig1659:19536..20031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 19537..20031 +
1691480813.2836807-CDS-H-paniculata_contig1659:19536..200311691480813.2836807-CDS-H-paniculata_contig1659:19536..20031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 19537..20031 +
1622929317.4749792-CDS-H-paniculata_contig1659:21185..219381622929317.4749792-CDS-H-paniculata_contig1659:21185..21938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 21186..21938 +
1691480813.2922392-CDS-H-paniculata_contig1659:21185..219381691480813.2922392-CDS-H-paniculata_contig1659:21185..21938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1659 21186..21938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1659.3737.1prot_H-paniculata_contig1659.3737.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1659 15665..21938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1659.3737.1

>prot_H-paniculata_contig1659.3737.1 ID=prot_H-paniculata_contig1659.3737.1|Name=mRNA_H-paniculata_contig1659.3737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=600bp
MPKRPFVVYTGPAKSAKPTAVVQAQILKERRLGQLVQESIRLTKMKQCLE
EDLGEQISVEVWAQAAGQSAKSLQQTLKLGDEARGSLVELNLGLVKTIVS
TYWRGMAAGGGSRRTGNGAQFTRTDLLQEATMGLIHAVEKFDPTKGFRFC
TYAQWWVRKYLNECLQNQNRLIRIPTYFAHRISRVNHATNQLTVDLDRAP
TLEELAIATGYTVPQVEACLEQGTFSVSSLDALIGSKSAGNGSGRSGGGE
GSSDGSHGGGFNLLDLVASDGAAEAEGEPRGGDYKGGEEGHDGGANHMRQ
ELRTDLSTALSRLLDDREKQCLVLRYGLEDGVTKTEQEVGRIMGLNLSEV
TALAETSMRKLRGGTLPEERAKLMSYLSMYEPDYLPLSLGGSSGSSRSIN
GGVKDVDVGSKPTSGYYHDSHVGYDDDMLRDPCETVKLEEELARYLRARG
ITKDFSRRNDDDYGEPSMEELNLGSDRIPEPRENRAFKLDYDEEDEEVGA
KMGNKKGWSKDALAKDGGGVKVISGSRSGKHGNSGGGVWDGGVAGAQTGM
DVDNPRAKFIGEAEPRPNSREAMQLEHLSRLLFDGEEPEDFVFGQSTLQ*
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mRNA from alignment at H-paniculata_contig1659:14335..22699+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1659.3737.1 ID=mRNA_H-paniculata_contig1659.3737.1|Name=mRNA_H-paniculata_contig1659.3737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8365bp|location=Sequence derived from alignment at H-paniculata_contig1659:14335..22699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGTTTCATGTTTTCGCTGAACGATAGAATACGCGTGTGTCCCTCGCGT
CAGATCGGCAGACAATTGTGTTGTTAGCCCAACATTCCCGGCACCTAGTG
TACCTCTCACGTGCATAAGGATAGAGCGTAGGCGAGTGTGAACATAGTAA
GTTCGAGAGAGCCATCCATACGCAGGTCTTGAGAGGATTCACTAGGGCGG
TGTTCGGGCAGGTACCGATAGGAAGGTTGTTCGCTTCTCAACATCCGACA
CGCAACACTGAAAACGCAAACGTCATCGAATCTGGCCCCACGTTGCCTCT
TATTCGAGTGATTTTTGACGCACACGTCGTCTGGGATTGGAGTGTATCGC
TGGTCGGGGCACGGAAGAGCTGAGACAAACAGGACTTCTACGGACCTTAA
CTATTTTCCACTTGGGTCCTGCTTCCTGAGTTGTTCGTGTCAAAGACTGA
CTGACGGCCTCCTCCATGTTGTGGAATCGGTGTAAGACAACGATGGTGGT
GGAGAGTTTGTCAGCACGTATCTCGCCAGTAAAGCGGGTGCTGCGGCGAG
GCTGGGCCGTCTGCCTTTGCGCGGCTATTTGTGGCCGATTATTGGCGCCA
GGGGGGCGGCCAGGCTCCGACGGGGGAAGGGCAGCACCGGCAACTGGGGC
TCATGCTTACGCGTTCCTAGCAAGGCCGGTAGTGCGGTCGCAGCAATTCA
GGCGGGGGCGTTTTCACAAGCCCATGAAGACACCCTGTACCTCGTGCCAG
CAGCGTGGCAGTAGCAGTGGCGGAGGTGGCACGCTTCCCGGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTCGAGGCGGCGAAGGAGGA
GTGCTGCTGCGCTCTCCGCGAACCGGTGAGCATTGGTTTTGTGTCGGTCT
GGTCGGTATTCGTGTGTGCACTTGTGTTGCCGTGCTGTTGGTGTTTTGTG
GACGTGGATCCTTTTCTGGGAGAGCGGCTCGCGTTCGTGTGCTCTCAATT
TTGGAGTGAGGTGTCTGTTTTGCGCTCATCCGCTGGTCATCCGTTTCGTT
TTCACTTTGCACCCGCTTCCCCACTCCCCACGCCAAGAAACGGGTGCAAA
TACAGCGGTAAACTAAAGGAATTCTTTCTTCTGCCGGGGGCTGCATGATA
GGTGTGATCGACTACTGCGCCTCTAGGAACTCTTTCTCTATTACTCTGGA
TTTTGTCAGAGACTAGCGGTTACGCATGTTTCCTGTCTGTGCTTTGTGCC
TTTGCCTTTCCGTGTGCACGCACAGGCGCGTGGAGGTGTCGGATTTGTCA
ACAACGAATATAGACGAGGTGGTGCGGCCAATGCCCAAAAGGCCTTTCGT
TGTCTACACGGGACCTGCAAAGTCTGCCAAGCCCACGGCGGTGGTCCAGG
CTCAGATATTGAAAGAGCGTCGTCTCGGCCAGTTGGTGAGACGAAAGCTC
AGTTGCTCTATTTTTTCTGTATCTTGCTTTTGCTCAAACATTCCACTGGT
CGTTCGTTTTTCGATTTTTCTTTCACACAGCAAACCGTCCATTACAGTCA
ATGATCCTTTACGATACTGGGCAGCAATTTACCGCACGTATGATGTGGAG
TACCCATTAACACTATTATAACTAATAACATATTAGTAAACGCAGCGATA
GTGCTGTGCTGACTGTGTCCTTGTCGACACTCGTCCATCTTATGCGTGGG
CCGGGGGGAGGGCTCATACACCATTTTGTATTTTCATCATCATCCTTGCT
AAATAGTGTTTTCGAAACATTTTTTCATGTAGTGGTCGCCAGCTGTCAGC
CGTCCAATTCCCACCAATTTTTTCACATCCGCGAGTTTCAGTTGTCGACA
TGAAATATGGATAGATGAGAATGTACCGCCTTCATCTGTCATTCGTTGAC
GGGGACCCACAGGCTCAGCAGCAGGCCGTCTGCTACAATCCGTAGTGGCA
GTCGGGACATAACAATAGGAGTGATGTCTACCGTTGTTGGGAATCAGGCG
TTGGGCTCACTGGAACAAACCTGTCTCTTCCAGTTAGGTTTTCTTCTTCC
AGTTGTAAGGGGGTTAACCTTAGTCGCCTGCAAAAACACTCATCGATTAA
TTTTTCCTACATCGAACAGCTTTGTGTCCATCACCGACCAACAGGAGATC
GCTCCCCTTCTCCGTAAAAAACGAACAATGATATGTGTACTTCACGCTGA
ATCCCTAAACCTCATCTCAATACTACGGATCGTTTGCCCAGTGACCCGTG
TGTAACTGATCCGTAGAGGTCGGATCTTTAGTCATGTTGTCCCCCCTGGA
TCCATACGACACGGATCGTTAGTGCATGTTCTTGCACATGCGACCCGTAC
GCTGTGTTGGATGCGCACGTATATCGCACCGGTGATCCGTACACTGCATT
TTATCTGTACATATTTCTCCACTAGTGATCTACCGTCACTCATAGAAGGA
TGCCACACACCCAGCGGCTATCACTCGTTACGGAAATCTGGGGATATTAT
CCTGGTACCTGTACCGCAAATATGGTGTTGCATGCAGCAGTACACCAAAT
GTCTGCATTGCGTGCATACATCAGTATTGTCTGTATCTCCTGTCACCGGG
CGCAACTCTGCAGCATCATGCTGTTTGGGCTAAGCAGCTGACTCACATGA
GTACTCAATCCTGCTTCCTACTGGTATATCACTCTGCCATCGCTGGAGGG
ACCCAATATACACGGCGCTCTGGCCGCTGTGCGAGCCCTTGACGTACGTG
AGTATTTTCAAAATATCCGATGCTCTTTTACATCTAAAGTTGACATGTGA
TATTCTAAACTCATATTGATAACCAAAACACGTCGAGATCCCGCTGTACT
ATTTATCACATGATTGTCGACATAGGGGTTTGATCTTAACCAGGTCAAAA
CAATCTCGTCCGTCGAAATTCGGTACCCATCCCCTGCTAACCCCCCTACC
CACTTTCTTCGATGCGGGACTGGGAAAAAGTGCACGTAGAATCATGTCGA
AATGCAATCTAGCTGATCTGTGAGGGTTAAGCAATTCCTAATAGGAAACC
ATATACGAATCCGTGAAGATGGGAATATTATCATGCTGCCATTGGTGTGT
TGGTGATTTTCAAAAGTACCCTGCAAATTAAATAAACAGCAATATTTCAA
CTACCGTGAACGTTCTTGGCAGCGGGTCTTGTAATTGATTGATCAAATGG
ATTCCGAATTTTTTCACTATTTCGTCATACTCCACTCGCAGGTTCAAGAA
TCGATCCGGCTGACGAAGATGAAGCAGTGTCTGGAAGAGGACCTGGGTGA
ACAGATCTCGGTGGAAGTATGGGCCCAGGCGGCAGGACAGAGCGCCAAGT
CTCTTCAGCAAACCCTTAAGCTAGGCGATGAGGCACGGGGTTCCCTGGGT
AAGAAGGCTGACGATACGAAAGACATTAACGATCTAGCGCGAAGTGGTTG
TTCCCGTTCTTGACATTTTTTTTCTCACTTGATGAAATACATGCGAACAG
TTGTCAGCTATGAACAAAAATAATCGCGCACCCTCCAGTCCGTACATTAT
AGTATGCTACAATGGTCTAAAGCGTGTGCTCCATGTCACCCTCCAGTTGG
TTCATTAGTTATACAGTTGATTGCCCACTTCCAAACAGGCCATATGTTTT
CTTGTTTCAAAATTATATTGATCTTGCCCGTATTGATTTAATTTCGGAAA
TAAGCTCCCCCTCCTCAACCCACCTGACCCACCCAACCATAATGCAATAA
CAGTGGAGCTCAACCTGGGCCTGGTGAAGACGATTGTGTCGACCTATTGG
CGGGGCATGGCCGCGGGTGGCGGCAGCCGACGCACCGGAAATGGTGCCCA
GTTTACACGGACGGATCTATTGCAGGAGGCCACAATGGGGCTGATTCACG
CGGTGGAAAAGTTCGACCCCACGAAAGGGTTCCGATTCTGCACCTACGCC
CAGTGGTGGGTTCGGAAGTATCTGAATGAGTGCCTACAGAACCAGAACAG
GCTTATTCGGATACCCACGTACTTCGCGCACCGCATATCGAGGGTACGTG
TAGTAGAGCAGAGTGCTATGGTTGACGCGTTACGTTTTTCGGCGGCTGCA
TTTTCTAGCACAGCATCAGAAATGTCTTATCAGCTGTGTACATACACCTC
CTCCGTTAAGTAAGTAAAGGAACTTAAGTTTGATGCGCCATATCTCCAGC
TCTACGGTGATTCACTGGGAGTTCGTGTTATTTGTCGAAAAAGAATTTTA
CGTGGATTCAACTCAATACAACCAAGAAAAAATATTTCAAAGATTTCGGA
ACAAAAGATGAGCCGAAATCAATAAAATTTTAGCCATTTTTGACAGTCCC
GGCCAAGTTTTTGAGACTCAGCACAAGCACATAACACCACGATGGAGCCC
ACCGCAGCGACCCCACCACGCCGCAGAGGCGAGGAGTTGCCTTTCGACAG
GAGGTTTGCGGTTGCAATCGACATCGTGGTGGCAATTAAGCCGGGTCCCT
CGAAATTACCCCATGGCAAGTGGTCACGACTCTGTGCACGAAATATGGCT
GCGGCCTAAAATGCACCTTTTTGGGGTGATTTTTGGGCCATTTGCTTTTT
TTTAGACGCTTGCGCACGCCGTGGGCTTCACGGATTGTCATGAAAATTTG
GGGTCAAACCTATAAACATCAAGGATTCCAAATCTGCAAAAAGAACAATA
GGGACACCATCGATATCTCACACAAATCCAAGTTCCTTTACTTATTGAAC
GGAGGAGTTATTTATATAACGAGTGTTGATGTCGCTGTTGGGACGACAGT
GTTTTTGTGCTTGTGTTCGCGTATGATTTTGTTTTGCGGCGGCTGCCTTC
CTGTGATGGCGTCAGTGGCGTGGGTCGGTTCGATGGCGTGTGTGACATGT
TTTCCTTTGACTTTCACATATGAGTTGGGGAGTTTGTGTAGTCCACTGTT
TGGATGCCTACACCGGAATACGACCGAACGAGGCCTTGAGATGTTTGTTG
CATTTTTTAACTCCCCCCACCCTCCCTTGCCCTTCAATACCCTCGATGAA
CTGTCTCATTTTTACTATTTTTTCCACTCTGTTGTGTCTTATTTTGACTT
TCCCTCCCCTCCCCTCCGTTCCTTCATTTATTGCCTTCCTTTCGTTCACA
CCCACTTTACCAATCCATCCCCCTTTCCGAATAAAACTCCAACGTAAACC
AGGTTAACCATGCGACGAATCAGCTCACAGTTGACTTGGATCGCGCTCCG
ACCCTCGAAGAGCTTGCGATCGCCACGGGCTACACCGTCCCCCAGGTGGA
GGCCTGCCTGGAGCAAGGCACTTTCAGCGTGTCCAGCCTGGACGCTCTCA
TTGGCTCGAAAAGTGCGGGAAACGGAAGCGGACGCAGCGGCGGCGGCGAG
GGCAGCTCGGACGGCAGCCATGGCGGCGGCTTCAACCTGCTGGATCTGGT
AGCATCGGACGGGGCAGCAGAGGCCGAGGGAGAGCCTCGGGGCGGTGACT
ACAAGGGCGGCGAAGAGGGGCACGACGGAGGAGCGAACCACATGCGGCAG
GAGCTGAGGACGGACCTGTCAACCGCGCTGTCCAGGCTGCTGGACGACCG
TGAGAAGCAGTGCCTGGTGCTGCGGTATGGGCTGGAGGACGGGGTGACTA
AGACTGAGCAGGAGGTCGGGAGGATCATGGGGTTGAACTTGAGTGAGGTG
CGTATGCATTTATGCATGTATGCATTATGTATGTATGTGCTAGTAGTAAG
AGCTATGGTTACGCCCGTGCAGTGCGTGTTTTGTTGTCCTCGAGGCGCGC
TGCATAATGACTATGCGCTTGCACGAAGATTTGTTTTTGGAATGCCCTCA
TGAGATATGGACTGGTTGAAGAGTTGTGGCGGAACGGGAGCCGACGACGA
TTTCACTCTGTCAAGTATTGATAACGGATTGTGAAGGAAAAAACAAGAAT
TGAAATGATGACTGTTTTCTGTTTCATACTAATGACTTCAAGTGGTTCGT
GATATTTCGCTCGTGGTTCTAACCTTCATGGCTGAAAATTCAACTTCTTC
TTAATCTTCTTTCTCTTGTGGCGCTTGACCGGTCTTATGTGTTGCTATTG
CTCCAGCAGCAGGTAAGATAGGTAGGATATGTCACGCTTCCGAAAGAGCT
AACCGAAACCGGATAAATCAGAACCGCGAACTTGAGCTTACCCAAGTGTT
TGGTCTTTATTCTGTTTTTCAGTTCTTGACGAAATTTGAGTCATGTTTTT
TGAGACGATTTTATGTGGCTTCTCTGTCCTTCGGTATGTACCCTATCCTT
CTACGGATCAAGTATAAAATGATGTCATTTTTGCCTCAGTTTGTTCGCAA
CGCCATAGTTTTCGTCATCTGGCTTTGCACTTCGTGTGGAAACAGTTCGT
GTAGTTTTTCACCTGGTAAACATCTGGATTGTTGGTGTGGGTACTTCAGT
GACAGCATTCATACAAGCAGTCATGGAAGGTAATTGGATGACTGCTGCTA
TTGCAGCGTGAGGTGTGACTGATATTTCAAGCTGGGTTGCGAAAATTGAC
TCTCATGCCTAGTTATCACGACACCCCCACTGTGGCACCCGAGGTCAAAA
TCGCAAGGATGTACTCTACTACATATTATTGGTGGTGCTTGCCCAGCGTT
ATCGATTTGAGACAAAAAATGATGCTTTCTTAGAGCCTGTCTTACCGAGT
TCATGACTCCCACGTAGATAAGGCAGTATTTTTCCTTAGTACGACCGCAC
ACATTCTCTGTTAGCGTTTTTCCCCAGGATCATAACCTTCGGTTACTTGA
CGCCGCTGACCCTCAACCCCAAACCCCAATCTCCATCCGCCAATACAACA
GGTGACAGCACTCGCGGAAACATCAATGCGCAAGCTGAGAGGCGGTACCC
TACCCGAAGAGCGCGCGAAGCTCATGTCCTACCTCTCGATGTACGAACCA
GATTATCTGCCGTTAAGTCTCGGGGGTAGCAGCGGTAGCAGCAGAAGCAT
TAATGGAGGCGTCAAGGACGTCGACGTCGGCAGCAAGCCGACGTCAGGCT
ATTACCATGATAGTCACGTGGGGTATGATGACGATATGCTCCGGGACCCT
TGCGAGACCGTGAAACTAGAAGAAGAGCTGGCGCGGTACCTGCGGGCAAG
GGGTATTACTAAAGACTTCAGCCGGCGGAACGACGACGACTACGGAGAGC
CGTCGATGGAAGAGCTTAACCTCGGAAGCGATCGGATACCGGAACCTCGA
GAGAACCGTGCCTTCAAGCTGGATTATGACGAGGAGGACGAGGAGGTAGG
CGCGAAAATGGGTAACAAGAAGGGTTGGAGCAAGGACGCGCTGGCCAAGG
ACGGAGGGGGTGTGAAAGTGATCAGCGGGAGCAGGAGCGGTAAACACGGA
AATAGTGGCGGTGGTGTCTGGGACGGGGGGGTGGCGGGCGCCCAAACGGG
GATGGACGTGGATAATCCCCGGGCAAAGTTTATCGGAGAGGCCGAGCCAC
GACCCAATAGTCGGGAAGCGATGCAGCTGGAACACTTGAGCAGGTTACTG
TTCGACGGGGAGGAGCCTGAGGATTTTGTATTCGGGCAGTCTACTCTCCA
ATGACAGCTCGCAGTTTTGGGAGGAGGCTTGTCGTCAGTAAAGTTAGATA
CAGTACGTCAAGTAGGGTGGTAATACGGTGGTCATGGTCGTCTCTTGGTT
TTGTCTGTGGGAGCTTTTACTATTGTTACCTTTTTGGTTCTCCTGTGTTG
AACAAACAAGAAGTCAGGCGGGAAAATAACAAAGTAAAACGTTGCCGCTC
CATCTCTAATTTGGCGGCGTTTCTTGTTCACCTGTTTTTTTTTCTCGGTG
TGTGTACGTGTATGCGTGTTCGTTTTCTTATTTTAATGCACATGTCAATG
TTTCCTTTTTAGAGAGGAGTTATGCTCCACAAAAACCAGGGACAGATTAT
AGAACGGTGAATCAGAAGTACAAGTCGACGGGACAATAGTGTTAGCTGGG
TGAGCGCCTTTCCCCCCCTTGTTTGTGTCAAGTGCATCTGAAACGATACC
GTCGTTTACCATTCGCGACGGAAGGAAACATGGCGCAAGGATCGGAACAT
GAACGGAAAACGTTCGCTCTTTTTTTTTTTCCCAAGAGTGAAAAGTGTTG
AAACCCCAGACCAACGGTAAGGTCAGCAATTGCATGGCGACCCTTGATTC
ACGTGCGATGTTCGTTTTACTGTTGGCAGCGTGGTTGGTGCGCATGATCG
CACCACTGCAGCACTACCATACGATTTGTATGTCTTTTTGAGCGTATATT
GGTTCAGGTATTGGGGTGATTATGTATTTCTCAGCCGAGAGTCCTGGGAT
ATGGGTACGTTAGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig1659:14335..22699+

>mRNA_H-paniculata_contig1659.3737.1 ID=mRNA_H-paniculata_contig1659.3737.1|Name=mRNA_H-paniculata_contig1659.3737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3600bp|location=Sequence derived from alignment at H-paniculata_contig1659:14335..22699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAAAAGGCCTTTCGTTGTCTACACGGGACCTGCAAAGTCTGCCAA
GCCCACGGCGGTGGTCCAGGCTCAGATATTGAAAGAGCGTCGTCTCGGCC
AGTTGATGCCCAAAAGGCCTTTCGTTGTCTACACGGGACCTGCAAAGTCT
GCCAAGCCCACGGCGGTGGTCCAGGCTCAGATATTGAAAGAGCGTCGTCT
CGGCCAGTTGGTTCAAGAATCGATCCGGCTGACGAAGATGAAGCAGTGTC
TGGAAGAGGACCTGGGTGAACAGATCTCGGTGGAAGTATGGGCCCAGGCG
GCAGGACAGAGCGCCAAGTCTCTTCAGCAAACCCTTAAGCTAGGCGATGA
GGCACGGGGTTCCCTGGGTTCAAGAATCGATCCGGCTGACGAAGATGAAG
CAGTGTCTGGAAGAGGACCTGGGTGAACAGATCTCGGTGGAAGTATGGGC
CCAGGCGGCAGGACAGAGCGCCAAGTCTCTTCAGCAAACCCTTAAGCTAG
GCGATGAGGCACGGGGTTCCCTGGTGGAGCTCAACCTGGGCCTGGTGAAG
ACGATTGTGTCGACCTATTGGCGGGGCATGGCCGCGGGTGGCGGCAGCCG
ACGCACCGGAAATGGTGCCCAGTTTACACGGACGGATCTATTGCAGGAGG
CCACAATGGGGCTGATTCACGCGGTGGAAAAGTTCGACCCCACGAAAGGG
TTCCGATTCTGCACCTACGCCCAGTGGTGGGTTCGGAAGTATCTGAATGA
GTGCCTACAGAACCAGAACAGGCTTATTCGGATACCCACGTACTTCGCGC
ACCGCATATCGAGGTGGAGCTCAACCTGGGCCTGGTGAAGACGATTGTGT
CGACCTATTGGCGGGGCATGGCCGCGGGTGGCGGCAGCCGACGCACCGGA
AATGGTGCCCAGTTTACACGGACGGATCTATTGCAGGAGGCCACAATGGG
GCTGATTCACGCGGTGGAAAAGTTCGACCCCACGAAAGGGTTCCGATTCT
GCACCTACGCCCAGTGGTGGGTTCGGAAGTATCTGAATGAGTGCCTACAG
AACCAGAACAGGCTTATTCGGATACCCACGTACTTCGCGCACCGCATATC
GAGGGTTAACCATGCGACGAATCAGCTCACAGTTGACTTGGATCGCGCTC
CGACCCTCGAAGAGCTTGCGATCGCCACGGGCTACACCGTCCCCCAGGTG
GAGGCCTGCCTGGAGCAAGGCACTTTCAGCGTGTCCAGCCTGGACGCTCT
CATTGGCTCGAAAAGTGCGGGAAACGGAAGCGGACGCAGCGGCGGCGGCG
AGGGCAGCTCGGACGGCAGCCATGGCGGCGGCTTCAACCTGCTGGATCTG
GTAGCATCGGACGGGGCAGCAGAGGCCGAGGGAGAGCCTCGGGGCGGTGA
CTACAAGGGCGGCGAAGAGGGGCACGACGGAGGAGCGAACCACATGCGGC
AGGAGCTGAGGACGGACCTGTCAACCGCGCTGTCCAGGCTGCTGGACGAC
CGTGAGAAGCAGTGCCTGGTGCTGCGGTATGGGCTGGAGGACGGGGTGAC
TAAGACTGAGCAGGAGGTCGGGAGGATCATGGGGTTGAACTTGAGTGAGG
TTAACCATGCGACGAATCAGCTCACAGTTGACTTGGATCGCGCTCCGACC
CTCGAAGAGCTTGCGATCGCCACGGGCTACACCGTCCCCCAGGTGGAGGC
CTGCCTGGAGCAAGGCACTTTCAGCGTGTCCAGCCTGGACGCTCTCATTG
GCTCGAAAAGTGCGGGAAACGGAAGCGGACGCAGCGGCGGCGGCGAGGGC
AGCTCGGACGGCAGCCATGGCGGCGGCTTCAACCTGCTGGATCTGGTAGC
ATCGGACGGGGCAGCAGAGGCCGAGGGAGAGCCTCGGGGCGGTGACTACA
AGGGCGGCGAAGAGGGGCACGACGGAGGAGCGAACCACATGCGGCAGGAG
CTGAGGACGGACCTGTCAACCGCGCTGTCCAGGCTGCTGGACGACCGTGA
GAAGCAGTGCCTGGTGCTGCGGTATGGGCTGGAGGACGGGGTGACTAAGA
CTGAGCAGGAGGTCGGGAGGATCATGGGGTTGAACTTGAGTGAGGTGACA
GCACTCGCGGAAACATCAATGCGCAAGCTGAGAGGCGGTACCCTACCCGA
AGAGCGCGCGAAGCTCATGTCCTACCTCTCGATGTACGAACCAGATTATC
TGCCGTTAAGTCTCGGGGGTAGCAGCGGTAGCAGCAGAAGCATTAATGGA
GGCGTCAAGGACGTCGACGTCGGCAGCAAGCCGACGTCAGGCTATTACCA
TGATAGTCACGTGGGGTATGATGACGATATGCTCCGGGACCCTTGCGAGA
CCGTGAAACTAGAAGAAGAGCTGGCGCGGTACCTGCGGGCAAGGGGTATT
ACTAAAGACTTCAGCCGGCGGAACGACGACGACTACGGAGAGCCGTCGAT
GGAAGAGCTTAACCTCGGAAGCGATCGGATACCGGAACCTCGAGAGAACC
GTGCCTTCAAGCTGGATTATGACGAGGAGGACGAGGAGGTAGGCGCGAAA
ATGGGTAACAAGAAGGGTTGGAGCAAGGACGCGCTGGCCAAGGACGGAGG
GGGTGTGAAAGTGATCAGCGGGAGCAGGAGCGGTAAACACGGAAATAGTG
GCGGTGGTGTCTGGGACGGGGGGGTGGCGGGCGCCCAAACGGGGATGGAC
GTGGATAATCCCCGGGCAAAGTTTATCGGAGAGGCCGAGCCACGACCCAA
TAGTCGGGAAGCGATGCAGCTGGAACACTTGAGCAGGTTACTGTTCGACG
GGGAGGAGCCTGAGGATTTTGTATTCGGGCAGTCTACTCTCCAATGAGTG
ACAGCACTCGCGGAAACATCAATGCGCAAGCTGAGAGGCGGTACCCTACC
CGAAGAGCGCGCGAAGCTCATGTCCTACCTCTCGATGTACGAACCAGATT
ATCTGCCGTTAAGTCTCGGGGGTAGCAGCGGTAGCAGCAGAAGCATTAAT
GGAGGCGTCAAGGACGTCGACGTCGGCAGCAAGCCGACGTCAGGCTATTA
CCATGATAGTCACGTGGGGTATGATGACGATATGCTCCGGGACCCTTGCG
AGACCGTGAAACTAGAAGAAGAGCTGGCGCGGTACCTGCGGGCAAGGGGT
ATTACTAAAGACTTCAGCCGGCGGAACGACGACGACTACGGAGAGCCGTC
GATGGAAGAGCTTAACCTCGGAAGCGATCGGATACCGGAACCTCGAGAGA
ACCGTGCCTTCAAGCTGGATTATGACGAGGAGGACGAGGAGGTAGGCGCG
AAAATGGGTAACAAGAAGGGTTGGAGCAAGGACGCGCTGGCCAAGGACGG
AGGGGGTGTGAAAGTGATCAGCGGGAGCAGGAGCGGTAAACACGGAAATA
GTGGCGGTGGTGTCTGGGACGGGGGGGTGGCGGGCGCCCAAACGGGGATG
GACGTGGATAATCCCCGGGCAAAGTTTATCGGAGAGGCCGAGCCACGACC
CAATAGTCGGGAAGCGATGCAGCTGGAACACTTGAGCAGGTTACTGTTCG
ACGGGGAGGAGCCTGAGGATTTTGTATTCGGGCAGTCTACTCTCCAATGA
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