prot_H-paniculata_contig16571.3730.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16571.3730.1
Unique Nameprot_H-paniculata_contig16571.3730.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length296
Homology
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 9.800e-58
Identity = 120/321 (37.38%), Postives = 185/321 (57.63%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKVCFQEKC 296
            ++D+ILITG +++++   +  LM  F++TD+G V  ++G+EV R+   GTL +S+  Y   IL+R+GME+A+P                         +++QAI GSL +L QCTR+D+ Y V Q  R  + P+Q +M A K +LRYLR  PDLPI Y K  F L  ++D+S G   +   +STTG +  L  G + + +  Q + A ++ EAEL AL+  A++ +Y+S+ + E+G+     V +  D  GAL +ASNA FSSR+KHIA+RF  +RE  K   + + H  S   L+D+ TK L P+   A   ++    KC
Sbjct:  416 YVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL-PKQRFATIMQLIKDYKC 734          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.220e-57
Identity = 113/315 (35.87%), Postives = 180/315 (57.14%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKV 290
            ++D+ILITG  ++L+   +  L  +F++TD+G V  ILG++V R+   GTL +S+  YV + L+RFGM+EA+P                         K YQ++ GS+ +L QCT+FD+ Y   Q ++  S P+Q NM A K +LRYLR  P LPI Y +  F L  ++D+S G   +   +STTG +  LA G + + +  Q +TA S+ EAE+ AL+  A++ +Y+S+ + EL +     V +  D  GAL +A NA  S R+KH+A+R+  +RE      + + H  S+HQL+D+ TK L      ++  ++
Sbjct:  175 YVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNG-RSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQI 488          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.370e-57
Identity = 114/315 (36.19%), Postives = 181/315 (57.46%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKV 290
            ++D+ILITG  ++L+   +  L  +F++TD+G V  ILG++V R+   GTL +S+  YV ++L+RFGM+EA+P                         K YQ++ GS+ +L QCTRFD+ Y   Q ++  S P+Q NM A K +LRYLR  P LPI Y +  F L  ++D+S G   +   +STTG +  LA G + + +  Q +TA S+ EAE+ AL+  A++ +Y+S+ + EL +     V +  D  GAL +A NA  S R+KH+A+R+  +RE      + + H  S+HQL+D+ TK L      ++  ++
Sbjct:  383 YVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNG-RSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQI 696          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 4.680e-56
Identity = 113/315 (35.87%), Postives = 180/315 (57.14%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKV 290
            ++D+ILITG  ++L+   +  L  +F++TD+G V  ILG++V R+   GTL +S+  YV ++L+RFGM+EA+P                         K YQ++ GS+ +L QCTRFD+ Y   Q ++  S P+Q NM A K +LRYLR  P LPI Y +  F L  ++D+S G   +   +STTG +  LA G + + +  Q +TA S+ EAE+ AL+  A++ +Y+S+ + EL +     V +  D  GAL +A NA  S R+KH+ +R+  +RE      + + H  S+HQL+D+ TK L      ++  ++
Sbjct:  539 YVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNG-RSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQI 852          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 1.430e-55
Identity = 110/285 (38.60%), Postives = 173/285 (60.70%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT--------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTK 276
            ++D+ILITG  ++L+   +  L  +F++TD+G V  ILG++V R+   GTL +S+  YV ++L+RFGM+EA+P         K YQ++ GS+  L QCTRFD+ Y   Q ++  S P+Q NM A K  +RYLR  P LPI Y +  F L  ++D+S G   +   +STTG +  LA G + + +  Q +TA S+ EAE+ AL+  A++ +Y+S+ + EL +     V +  D  GAL +A NA  S R+K +A+R+  +RE      + + H  S+HQL+D +T+
Sbjct:  158 YVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPDQILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNG-RSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNATHSQRTKLVALRYFFIRELVLLGQITLHHRPSEHQLADXMTE 441          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 2.610e-55
Identity = 112/299 (37.46%), Postives = 168/299 (56.19%), Query Frame = 0
Query:   23 MKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKVCFQEKC 296
            M  F++TD+G V  ++G+EV R+   GTL +S+  Y   IL+R+GME+A+P                         +++Q I GSL +L QCTR+D+ Y V Q  R  + P+Q +M A K +LRYLR  PDLPI Y K  F L  ++D+S G   +   +STTG +  L  G + + +  Q + A ++ EAEL AL+  A++ +Y+S+ + E+G+     V +  D  GAL +ASNA FSSR+KHIA+RF  +RE  K   + + H  S   L+D+ TK L P+   A   ++    KC
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL-PKQRFATIMQLIKDYKC 297          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 5.670e-55
Identity = 114/316 (36.08%), Postives = 177/316 (56.01%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHF-SSLQRITATSSTEAELVALATCAKQGIYMSSLLMELGW-TQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKV 290
            ++D++L+ G     +  V+  L K+F +TDLG  SL+LGME+ R++ + TL +S+  Y  SIL+RFGM  + PT                        ++YQ IVGSL ++ Q  R+D+ Y   Q AR M+KPS+ +M+A K  LRYL    D  I Y K  F+L  +SD++     +   KST+  + +LA+ P+ F S LQ +TA S+ EAELVA A   K+ ++ S+++ ELG+  + +++ V CD    LH   N +FSSR+KHIA+RF  +RE      + I +  ++  L+D+ TK  +      L D +
Sbjct:  118 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNG-KSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLI 432          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 9.720e-52
Identity = 112/288 (38.89%), Postives = 166/288 (57.64%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHP----------TKQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSSLQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQL 278
            ++++ILI+G    L+  ++  L  +F+ITD+G V LILGM+VTR+  +GTL +S+  YV SIL+  GME  +P          +K YQ+I GSL +L QC R+D  Y V+Q  R  SKP++ +  A K  LRY+R  PDL I + +  F +  ++D+S G   + R KSTTG  +                     E+EL A++  AK+  Y+SSLLM L +  L  + +  D  G L LA+N  FSSR+KHIA+RF  ++E  K + + + HV +Q  L+D+ TK L
Sbjct:  577 YVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCNPPADELLGAAESKLYQSITGSLLYLAQCKRYDQSYAVNQLTRACSKPARAHTTAAKHALRYIRGTPDLLIIFKRGRFRVAAFADSSFGAIPDNR-KSTTGLQV---------------------ESELQAISYGAKEAAYLSSLLMALKFENLKPISIYSDSSGTLSLAANTMFSSRTKHIALRFFVLQESIKPRHIAVHHVPTQAMLADIATKHL 842          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.260e-51
Identity = 108/283 (38.16%), Postives = 167/283 (59.01%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHFSS-LQRITATSSTEAELVALATCAKQGIYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKG 258
            ++D+ILITG +++++   +  LM  F++TD+G V  ++G+EV R+   GTL +S+  Y   IL+R+GME+A+P                         +++QAI GSL +L QCTR+D+ Y V Q  R  + P+Q +M A K +LRYLR  PDLPI Y K  F L  ++D+S G   +   +STTG +  L  G + + +  Q + A ++ EAEL AL+  A++ +Y+S+ + E+G+     V +  D  GAL +ASNA FSSR+KHIA+RF  +R   +  G
Sbjct: 1195 YVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNG-RSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRNSRRGTG 1476          
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.310e-51
Identity = 114/316 (36.08%), Postives = 177/316 (56.01%), Query Frame = 0
Query:    1 FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGTLELSRHRYVLSILKRFGMEEAHPT------------------------KQYQAIVGSLTFLIQCTRFDVYYRVSQAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCGGTEETRTKSTTGSMLLLASGPVHF-SSLQRITATSSTEAELVALATCAKQGIYMSSLLMELGW-TQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAVREWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKV 290
            ++D++L+ G     +  V+  L K+F +TDLG  SL+L ME+ R++ + TL +S+  Y  SIL+RFGM  + PT                        ++YQ IVGSL ++ Q  R+D+ Y   Q AR M+KPS+ +M+A K  LRYL    D  I Y K  F+L  +SD++     +   KST+  + +LA+ P+ F S LQ +TA S+ EAELVA A   K+ ++ S+++ ELG+  + +++ V CD    LH   N +FSSR+KHIA+RF  +RE      + I +V ++  L+D+ TK  +      L D +
Sbjct:  678 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNG-KSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLI 992          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16571.3730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF46_9PHAE9.800e-5837.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE1.220e-5735.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE2.370e-5736.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE4.680e-5635.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDK0_9PHAE1.430e-5538.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE2.610e-5537.46Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE5.670e-5536.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9R3_9PHAE9.720e-5238.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHG5_9PHAE1.260e-5138.16Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KNH5_9PHAE1.310e-5136.08Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..74
e-value: 8.0E-10
score: 38.8
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 70..280
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..247
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 70..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16571contigH-paniculata_contig16571:3875..4762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16571.3730.1mRNA_H-paniculata_contig16571.3730.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16571 3875..4762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16571.3730.1 ID=prot_H-paniculata_contig16571.3730.1|Name=mRNA_H-paniculata_contig16571.3730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=296bp
FLDNILITGPSEKLLIGVRNGLMKKFDITDLGNVSLILGMEVTRNKTSGT
LELSRHRYVLSILKRFGMEEAHPTKQYQAIVGSLTFLIQCTRFDVYYRVS
QAARFMSKPSQDNMIAVKRILRYLRWQPDLPIKYSKNNFELVGYSDASCG
GTEETRTKSTTGSMLLLASGPVHFSSLQRITATSSTEAELVALATCAKQG
IYMSSLLMELGWTQLSKVEVLCDVKGALHLASNANFSSRSKHIAIRFAAV
REWNKNKGLVIDHVSSQHQLSDVLTKQLHPRALIALCDKVCFQEKC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like