prot_H-paniculata_contig16517.3715.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16517.3715.1
Unique Nameprot_H-paniculata_contig16517.3715.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length509
Homology
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: D7FJF5_ECTSI (Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF5_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 1.270e-139
Identity = 201/311 (64.63%), Postives = 245/311 (78.78%), Query Frame = 0
Query:  198 STGVKLDSVKYPISGLLLIREFRSFQEGEEDGERAYLPVDPLVRDLTNFGLPD----APGI-KKPFHETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRRFVAMNNREDNVWGQQEKYMLP-RWPDLFNVSVIVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            S+  +LD +KYP SGLLL  E+R+F E E+DGER Y P+DPLVR L NFG+ D    A G+ KK FHETLVMR T+P HS SW INI P+DH +FEE+LFHFNPRRRFVAMNNRE N+WGQQEK+ML  RWP++FNVS+ V +QID AGFHVA+DGKYCA+FAHRT +PP+GE+L+LQVMT DDY TNL LVVHEIWWGHKDTMPGLPG  KE  P    + + RG +SND+F DLH   LPPM + + E ++R RL D+F PYGA QV+VFHR  K+FGFIKF++H+ AAKALE+L G E++G  +RLS+
Sbjct:  187 SSNPRLDPIKYPASGLLLRDEYRTFAEIEKDGERVYEPLDPLVRLLKNFGIADSNSGADGVAKKQFHETLVMRATIPAHSTSWAINICPKDHKDFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINVAVQIDAAGFHVAVDGKYCATFAHRTKVPPSGEELVLQVMTRDDYDTNLRLVVHEIWWGHKDTMPGLPGRDKE--PNRRTAENWRGSNSNDAFVDLHAAGLPPMPTSDLEESVRKRLIDMFQPYGAIQVRVFHRESKNFGFIKFREHNDAAKALEELGGAEVHGKPMRLSK 495          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A6H5JWU1_9PHAE (Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU1_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.900e-139
Identity = 195/302 (64.57%), Postives = 238/302 (78.81%), Query Frame = 0
Query:  207 KYPISGLLLIREFRSFQEGEEDGERAYLPVDPLVRDLTNFGLPDAPG-----IKKPFHETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRRFVAMNNREDNVWGQQEKYMLP-RWPDLFNVSVIVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            KYP SGLLL  E+R+F E E++GERAY P+DPLVR L NFG+ D+       +KK FHETLVMR T+P HS SW INI P+DH NFEE+LFHFNPRRRFVAMNNRE N+WGQQEK+ML  RWP++FNVS+ + +QID AGFHVA+DGKYCA+FAHRT +PPN E+L+LQVMT DDY TNL LVVHEIWWGHKDTMPGLPG  KE  P    + + RG +SND+F DLH   LPPM + + + ++R RL D+F PYGA QV+VFHR  K+FGFIKF++H+ AAKALE+L G E++G  +RLS+
Sbjct:   13 KYPASGLLLRDEYRTFAEIEKEGERAYEPLDPLVRLLKNFGIADSNSGADGVVKKQFHETLVMRATIPAHSTSWAINICPKDHKNFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINLAVQIDAAGFHVAVDGKYCATFAHRTKVPPNDEELVLQVMTRDDYDTNLPLVVHEIWWGHKDTMPGLPGRDKE--PNRRTAENWRGSNSNDAFVDLHAAGLPPMPNSDLQESVRKRLVDMFQPYGAIQVRVFHRESKNFGFIKFREHNDAAKALEELGGAEVHGKPMRLSK 312          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A7S2E642_9STRA (Galectin n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E642_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.350e-23
Identity = 74/257 (28.79%), Postives = 120/257 (46.69%), Query Frame = 0
Query:  259 HETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRR----FVAMNNREDNVWGQQEKYMLPRWPDLFN-VSVIVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLH-----VGNLPPMRSPEEENAIRARLRDLFDPYG-AYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSRPK 504
            + TL ++ +VP  S+ +  NI+  +H ++  VLFHFNPR+R     + +N++++  WGQ     L + P +F  VS  + +QI    F V I  K+CA   HRT LP     L  QV + DDYG+    +V+ +WWG KD   G                D  G    + ++ +H     +  L  ++   + +  RA L   F  YG A   KV       F F++ +    A  AL++++       + RL+R +
Sbjct:  109 NNTLAIKFSVPKESRRFSFNIAGPNHGDYNNVLFHFNPRQRQKGGHLVINDKQEGTWGQGINVPLSQIPVIFGQVSCTLILQITGDCFDVFIGDKHCARLDHRTSLPRENCSLHFQVPSTDDYGSLENWIVYRVWWGRKDLKAG----------------DLEGVAGVNQYSSVHPKKLFISGLTKIKHEAQVDLRRAELERAFRKYGGALGCKVTVPTNSTFAFVEVETERQADIALQEMA------HRYRLNRAR 343          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: B8LBZ9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBZ9_THAPS)

HSP 1 Score: 110 bits (275), Expect = 4.520e-22
Identity = 69/256 (26.95%), Postives = 120/256 (46.88%), Query Frame = 0
Query:  259 HETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRR----RFVAMNNREDNVWGQQEKYMLPRWPDLFNV-SVIVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLH-----VGNLPPMRSPEEENAIRARLRDLFDPYGAYQ--VKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            + TL ++   P  S  + INI+  ++ N+  +LFHFNPR       + +N+R++++WG      L   P +F   +  + +Q+++ GF V ++G +C    +RT+LP     L LQ  ++DDYG      V+ +WWG K++M                + D  G    + ++ +H     V NLP + +  E +  RA L   F  YG  Q  V V       F F++      A  AL +++    N +++  +R
Sbjct:  320 NNTLAIKFNAPEESSRFSINIAGPNNDNYNNILFHFNPRHFQKGGQLVINDRKESMWGNDISVPLSTLPLMFGTHACTLVVQMNEDGFDVFVEGVHCCRLEYRTELPRGKGSLFLQCPSSDDYGNPEDWSVYRVWWGRKESM----------------ARDLNGVAGVNLYSAVHPKKLFVSNLPKLHTDPEVDLRRAELERAFRKYGGPQGAVSVLVPKNSTFAFVEVASEQQADLALLEMA----NKYRVNKAR 555          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A7S2WCV4_9STRA (Galectin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCV4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.820e-20
Identity = 67/248 (27.02%), Postives = 114/248 (45.97%), Query Frame = 0
Query:  262 LVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRR---FVAMNNREDNVWGQQEKYMLPRWPDLFNVSVI-VGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSRPKG 505
            LV++  +P  SQ + IN+ P+DH    E++ HFNPR      + +N++ DN WG+  +      P LF      +         ++AIDG     F +R++ P  G  +ILQ+ TADDYG+     V  +WWG    +   P   + +     ++ D        S +D+ VG LP  R   +   + + L +LF        +V     K   F+ F+  ++A  A++     E+ G ++ L+  +G
Sbjct:  167 LVIQAQIPDVSQKYAINLCPKDHRGGSEIMLHFNPRTERGGCLVLNDKRDNDWGRTIRIPAMECPPLFGREECQLTFHFGARHINLAIDGHLYCRFGYRSEPPAEGSDIILQLPTADDYGSPQMWTVKTVWWGPLSDL--APAGRRTKWNGTIKTCDPPTSFLGQS-SDIFVGGLP--RDVADLRKLESALLELFADMRPKHARVVPG--KGIAFVSFESPAAAQGAMDRHKNAELEGRRLILNFSRG 407          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A7S4RA39_9STRA (Galectin n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA39_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.920e-19
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  259 HETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRR----FVAMNNREDNVWGQQEKYMLPRWPDLFN-VSVIVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPG 397
            + TL ++ +VP  S+ +  NI+  +H ++  VLFHFNPR+R     + +N++++  WGQ     L + P +F  +S  + +QI    F V I  K+CA   HRT LP     L  QV + DDYG+    +V+ +WWG KD   G
Sbjct:  293 NNTLAIKFSVPKESRRFSFNIAGPNHGDYNNVLFHFNPRQRQKGGHLVINDKQEGTWGQGINVPLSQIPVIFGQISCTLILQITGDCFDVFIGDKHCARLDHRTSLPRENCSLHFQVPSTDDYGSLENWIVYRVWWGRKDLKAG 436          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A067BYK2_SAPPC (Galectin n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYK2_SAPPC)

HSP 1 Score: 97.1 bits (240), Expect = 5.100e-18
Identity = 72/257 (28.02%), Postives = 121/257 (47.08%), Query Frame = 0
Query:  259 HETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRRF---VAMNNREDNVWGQQEKYMLPRWPDLFNVSV----IVGIQIDKAGFHVAIDGKYCASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAVKERKPAPARSTDRRGDHSNDSFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSRPKGVTR 508
            + TLV+  T+P  S  + +N++  D      ++ H NPR+     + +N+  +  WG    +++ R P +F        ++ I I  +GF + +D  +   F H+  L   G+ L+L V T D+YG    +V+H +WWGH D M   P     R   P    D R  H+N    D++VGNLP         A R+ L  LF  +    +++  RG   FGF+  ++ +   +A+ DL G  + G+   L     +T+
Sbjct:  189 NNTLVVNGTIPSSSCRFVLNLATTD----GTIVCHLNPRKMRGGQILLNSFVEGRWGTA--HIVQRCPLIFGSPTPFRFMLRITITPSGFALFVDEVFVDEFKHQIPLR-EGDDLVLNVPTKDEYGNPEVVVLHNVWWGHTD-MAATPARPPPRYNMPG--PDMRMPHNNQF--DVYVGNLP-------SEANRSDLARLFADFTYDYIRITQRG---FGFVALKNAADVDRAVRDLDGVVLPGFTAHLKISAALTK 423          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A1E4SLF2_9ASCO (Polyadenylate-binding protein n=1 Tax=Suhomyces tanzawaensis NRRL Y-17324 TaxID=984487 RepID=A0A1E4SLF2_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 3.050e-6
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0
Query:  423 SFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGA----YQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            +F ++++ N+P   S E   A       LF PYGA    Y  K      K FGFI F+DH +A KA+++L+ +EING KI + R
Sbjct:  230 NFTNIYIKNIPLDFSEESFKA-------LFQPYGAITSSYLEKDAEGNSKGFGFINFEDHEAAVKAVDELNDKEINGQKIYVGR 306          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A2Z5WH83_CANBO (Polyadenylate-binding protein n=1 Tax=Candida boidinii TaxID=5477 RepID=A0A2Z5WH83_CANBO)

HSP 1 Score: 61.2 bits (147), Expect = 3.080e-6
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 0
Query:  423 SFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRG----EKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            +F +++  N+ P  S +E          LF+P+GA    V  +      K FGF+ F+DH +AAKA+E+L+ +EING K+ + R
Sbjct:  225 NFTNIYAKNVDPELSDDE-------FAKLFEPFGAITSAVLEKDAAGKSKGFGFVNFEDHEAAAKAVEELNDKEINGKKLYVGR 301          
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Match: A0A1L0BZ40_9ASCO (Polyadenylate-binding protein n=1 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0BZ40_9ASCO)

HSP 1 Score: 60.5 bits (145), Expect = 5.300e-6
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0
Query:  423 SFADLHVGNLPPMRSPEEENAIRARLRDLFDPYGAYQVKVFHRG----EKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRLSR 502
            +F ++ V N     S +E       L  LF+PYGA     F +      K FGF+ FQDH +A KA+E+L+ +EING KI + R
Sbjct:  225 NFTNVFVKNFGSDFSEDE-------LTKLFEPYGAITSLYFEKDAEGKSKGFGFVNFQDHEAATKAVEELNDKEINGQKIYVGR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16517.3715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FJF5_ECTSI1.270e-13964.63Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JWU1_9PHAE1.900e-13964.57Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
A0A7S2E642_9STRA3.350e-2328.79Galectin n=1 Tax=Ditylum brightwellii TaxID=49249 ... [more]
B8LBZ9_THAPS4.520e-2226.95Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2WCV4_9STRA2.820e-2027.02Galectin n=1 Tax=Rhizochromulina marina TaxID=1034... [more]
A0A7S4RA39_9STRA3.920e-1936.11Galectin n=3 Tax=Ditylum brightwellii TaxID=49249 ... [more]
A0A067BYK2_SAPPC5.100e-1828.02Galectin n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A0... [more]
A0A1E4SLF2_9ASCO3.050e-639.29Polyadenylate-binding protein n=1 Tax=Suhomyces ta... [more]
A0A2Z5WH83_CANBO3.080e-635.71Polyadenylate-binding protein n=1 Tax=Candida boid... [more]
A0A1L0BZ40_9ASCO5.300e-639.29Polyadenylate-binding protein n=1 Tax=[Candida] in... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 426..501
e-value: 5.7E-9
score: 45.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 446..498
e-value: 6.7E-9
score: 35.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 425..505
score: 13.601
NoneNo IPR availableGENE3D2.60.120.200coord: 253..366
e-value: 4.6E-14
score: 54.1
NoneNo IPR availablePANTHERPTHR11346GALECTINcoord: 260..466
NoneNo IPR availablePANTHERPTHR11346:SF147GALECTINcoord: 260..466
IPR001079Galectin, carbohydrate recognition domainPFAMPF00337Gal-bind_lectincoord: 261..359
e-value: 2.4E-8
score: 33.6
IPR001079Galectin, carbohydrate recognition domainPROSITEPS51304GALECTINcoord: 248..386
score: 13.907
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 418..505
e-value: 4.1E-14
score: 54.5
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 412..502
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 260..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16517contigH-paniculata_contig16517:291..4806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16517.3715.1mRNA_H-paniculata_contig16517.3715.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16517 282..5501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16517.3715.1 ID=prot_H-paniculata_contig16517.3715.1|Name=mRNA_H-paniculata_contig16517.3715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=509bp
MCSCNSILQLHYSLMASRAGRRNRKNSDEDYEEVSAAPTSTRPSSNRRAT
ATEDVMDTLTPEEQYLLKVYRLFRKQTPVPPESTNMKRPASPIPPNGVGG
KRPLGSVAATEKLGASRAGAGLGGVSETGTASKTREPSPPPRPAVPQPTD
TATRLKMLLEKKRKEATGPRAGSAAAAAGASIQRKAKINKGSGGSSSSTG
VKLDSVKYPISGLLLIREFRSFQEGEEDGERAYLPVDPLVRDLTNFGLPD
APGIKKPFHETLVMRITVPPHSQSWGINISPQDHHNFEEVLFHFNPRRRF
VAMNNREDNVWGQQEKYMLPRWPDLFNVSVIVGIQIDKAGFHVAIDGKYC
ASFAHRTDLPPNGEKLILQVMTADDYGTNLGLVVHEIWWGHKDTMPGLPG
AVKERKPAPARSTDRRGDHSNDSFADLHVGNLPPMRSPEEENAIRARLRD
LFDPYGAYQVKVFHRGEKDFGFIKFQDHSSAAKALEDLSGEEINGWKIRL
SRPKGVTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR001079Galectin_CRD
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
IPR013320ConA-like_dom_sf