prot_H-paniculata_contig16512.3712.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16512.3712.1
Unique Nameprot_H-paniculata_contig16512.3712.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length206
Homology
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.100e-24
Identity = 56/109 (51.38%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   97 SDYWSI-EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +DY S+ EDE     PFRE VGSLMW+AN +RPDIS+AVR  ARH+H P   HWKA  +I+ YL  T + T      K  + S  VY D+ +ASKA+DR SVSG ++ V
Sbjct:  256 NDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDKSVDASTLVYVDADFASKANDRRSVSGAIVLV 364          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.610e-24
Identity = 52/103 (50.49%), Postives = 68/103 (66.02%), Query Frame = 0
Query:  103 EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITVG 205
            EDEE   WP REA+GS+MW++  SRPD+S AVR AARH H+P   HW A+  ++ YL GT  R  G  +++G  + + VY D+SYA   +DR SVSG   TVG
Sbjct:  904 EDEEGGEWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGT--RDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVG 1003          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5KEI7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI7_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 4.110e-23
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 0
Query:  102 IEDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +EDEE    PFRE VGSLMW+AN +RPDIS+A R  ARH+H P   HWKA  +I+ YL  T + T         E+   VY D+ +ASKA DR SVSG ++ V
Sbjct:  105 MEDEEAGDVPFREVVGSLMWIANQTRPDISNAARAVARHSHEPKKSHWKAAQKILNYLLETAHHTLKCKQDDTVEVGTLVYVDADFASKATDRRSVSGALVLV 207          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.160e-23
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   97 SDYWSI-EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +DY S+ EDE     PFRE VGSLMW+AN +RPDIS+AVR  ARH+H P   HWKA  +I+ YL  T + T         + S  VY D+ +ASKA+DR SVSG ++ V
Sbjct:  722 NDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLV 830          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.260e-23
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 0
Query:   97 SDYWSI-EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +DY S+ EDE     PFRE VGSLMW+AN +RPDIS+A+R   RH+H P   HWKA  +I+ YL  T + T         + S  VY D+ +ASKA+DR SVSG ++ V
Sbjct:   91 NDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNALRAVVRHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLV 199          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.330e-23
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   97 SDYWSI-EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +DY S+ EDE     PFRE VGSLMW+AN +RPDIS+AVR  ARH+H P   HWKA  +I+ YL  T + T         + S  VY D+ +ASKA+DR SVSG ++ V
Sbjct:  989 NDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLV 1097          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 5.730e-23
Identity = 52/105 (49.52%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  103 EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGE--MSVTVYADSSYASKADDRWSVSGGVITVG 205
            +DEE  SWPFRE +GSLMWLA  +RPDI++AVR  AR+  +P   HW+A + I+ Y+  T +   G  F++G    +S+ V+AD+ YASKA DR SVSGG++  G
Sbjct:   24 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDL--GITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCG 126          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.840e-23
Identity = 52/105 (49.52%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  103 EDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGG--EMSVTVYADSSYASKADDRWSVSGGVITVG 205
            +DEE  SWPFRE +GSLMWLA  +RPDI++AVR  AR+  +P   HW+A + I+ Y+  T +   G  F++G    +S+ V+AD+ YASKA DR SVSGG++  G
Sbjct:  107 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSD--SGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCG 209          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JJC4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC4_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.150e-22
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0
Query:  102 IEDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +EDEE    PFRE VGSLMW+AN +RPDIS+AVR  ARH+H P   HWKA  +I+  L  T+++T         E+   VY D+ +AS+A DR SVSG ++ V
Sbjct:  295 MEDEEAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKTSHWKAAQKILDCLLETVHQTLKYKQDDTVEVGTLVYVDADFASEATDRSSVSGALVPV 397          
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Match: A0A6H5JGM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM1_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.050e-22
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 0
Query:  102 IEDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWKAVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGGVITV 204
            +EDEE    PFRE VGSLMW+AN +RPDIS+AVR  AR +H P   HWKA  +I+++L  T ++          E+   VY D+ +ASKA DR SVSG ++ V
Sbjct:    1 MEDEEAGDMPFREVVGSLMWIANQTRPDISNAVRAVARQSHEPKKSHWKATQKILSFLLETAHQALKYKQDDTVEVGTLVYVDADFASKATDRISVSGALLLV 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16512.3712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQD0_9PHAE2.100e-2451.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJY0_9PHAE3.610e-2450.49CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5KEI7_9PHAE4.110e-2350.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE4.160e-2350.46Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KBM6_9PHAE4.260e-2348.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRL9_9PHAE4.330e-2350.46Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JTK6_9PHAE5.730e-2349.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR24_9PHAE5.840e-2349.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJC4_9PHAE2.150e-2249.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JGM1_9PHAE3.050e-2248.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16512contigH-paniculata_contig16512:663..2196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16512.3712.1mRNA_H-paniculata_contig16512.3712.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16512 142..4931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16512.3712.1 ID=prot_H-paniculata_contig16512.3712.1|Name=mRNA_H-paniculata_contig16512.3712.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
MKDSSTTTRALSMRVAQNRAMSTTSAALESGTPPRSHYFRVYEIADLHFT
GATGRPDGIKMAAGRTTRARAAQLEEEAATQEQLARGLLANLPFRISDYW
SIEDEEQCSWPFREAVGSLMWLANISRPDISSAVREAARHNHNPGPEHWK
AVMQIMAYLAGTINRTDGNIFKKGGEMSVTVYADSSYASKADDRWSVSGG
VITVG*
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