prot_H-paniculata_contig16510.3711.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16510.3711.1
Unique Nameprot_H-paniculata_contig16510.3711.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A7S0GMZ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMZ6_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.200e-45
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDKE+V
Sbjct:   30 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQV 108          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A1V9YCP2_9STRA (DNA repair and recombination protein RAD54 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YCP2_9STRA)

HSP 1 Score: 149 bits (377), Expect = 8.100e-45
Identity = 69/79 (87.34%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIG NRLVLFDPDWNPA DKQAAAR+WR+GQKK+CF+YRFV+TGT+EEK+FQRQLSKEGLQ+IVDDKEEV
Sbjct:   49 SKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARIWREGQKKQCFIYRFVATGTLEEKIFQRQLSKEGLQSIVDDKEEV 127          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A6H5KSB9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSB9_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 3.420e-44
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV
Sbjct:  588 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 666          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: K0SII4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SII4_THAOC)

HSP 1 Score: 151 bits (382), Expect = 7.090e-42
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDKE+V
Sbjct:  202 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFMATGTVEEKIFQRQLSKEGLQSVVDDKEQV 280          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A397BZT0_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZT0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.870e-41
Identity = 68/79 (86.08%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCG+NLIG NRLVLFDPDWNPA DKQAAAR+WR+GQKK+CF+YRFV+TGT+EEK+FQRQLSKEGLQ+IVDDKEEV
Sbjct:   36 SKAGGCGINLIGANRLVLFDPDWNPATDKQAAARIWREGQKKQCFIYRFVATGTLEEKIFQRQLSKEGLQSIVDDKEEV 114          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A836CHF7_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.030e-41
Identity = 70/79 (88.61%), Postives = 78/79 (98.73%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQ+KRC+VYRF+STGTIEEK+FQRQLSKEGLQ++V+D+ EV
Sbjct:  419 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQRKRCYVYRFISTGTIEEKIFQRQLSKEGLQSVVEDQAEV 497          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: B8CBU1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBU1_THAPS)

HSP 1 Score: 150 bits (379), Expect = 4.220e-41
Identity = 69/79 (87.34%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDK++V
Sbjct:  434 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKDQV 512          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A7S4APF4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4APF4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.090e-40
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDKE+V
Sbjct:  706 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQV 784          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A448YY45_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY45_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.090e-40
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDKE+V
Sbjct:  697 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQV 775          
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Match: A0A1Z5KRM6_FISSO (DNA repair and recombination protein RAD54 and RAD54-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRM6_FISSO)

HSP 1 Score: 151 bits (382), Expect = 1.090e-40
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   10 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEV 88
            SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAAR WRDGQKKRCF YRF++TGT+EEK+FQRQLSKEGLQ++VDDKE+V
Sbjct:  635 SKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQV 713          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16510.3711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0GMZ6_9STRA1.200e-4588.61Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A1V9YCP2_9STRA8.100e-4587.34DNA repair and recombination protein RAD54 (Fragme... [more]
A0A6H5KSB9_9PHAE3.420e-44100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0SII4_THAOC7.090e-4288.61Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A397BZT0_9STRA2.870e-4186.08Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A836CHF7_9STRA3.030e-4188.61SNF2 family N-terminal domain-containing protein n... [more]
B8CBU1_THAPS4.220e-4187.34Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4APF4_9STRA1.090e-4088.61Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A448YY45_9STRA1.090e-4088.61Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5KRM6_FISSO1.090e-4088.61DNA repair and recombination protein RAD54 and RAD... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 10..80
e-value: 2.6E-44
score: 153.7
NoneNo IPR availablePANTHERPTHR45629:SF6DNA REPAIR AND RECOMBINATION PROTEIN RAD54-LIKEcoord: 6..87
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 6..87
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..89
score: 9.299
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16510contigH-paniculata_contig16510:5050..5493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16510.3711.1mRNA_H-paniculata_contig16510.3711.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16510 5050..5493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16510.3711.1 ID=prot_H-paniculata_contig16510.3711.1|Name=mRNA_H-paniculata_contig16510.3711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
SPFSCVCFYSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVWRDGQK
KRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEVRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase