prot_H-paniculata_contig16501.3707.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16501.3707.1
Unique Nameprot_H-paniculata_contig16501.3707.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
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BLAST of mRNA_H-paniculata_contig16501.3707.1 vs. uniprot
Match: A0A6H5KTU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU3_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 3.860e-54
Identity = 107/153 (69.93%), Postives = 115/153 (75.16%), Query Frame = 0 
Query:    1 LTTLNLSSNELDGAAIRSSAPHLGALSSLESLDLSCNRVDALLGLPFLPRLRRLLVPYNRLTSRRGTAPRSVSRIDQSQALASSLVYLDVRDNRIAGPAHAHTPHLAALARLSSLLLMSPGGG---QANPVCASTGYREVMFSATCSLETLDG 150
            LT LNLSSNELDG AIRS APHLG L+SLESLDLSCNR+D LLGLPFLP LRRLLVPYNRLTS           +D  QALASSL +LD RDNRIAGPA AH PHLAAL RL SL L S G G   Q NP+CA  GYRE +F+A  SL+TLDG
Sbjct:   11 LTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTS-----------LDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREEVFAAARSLKTLDG 152
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BLAST of mRNA_H-paniculata_contig16501.3707.1 vs. uniprot
Match: D7FK56_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK56_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 3.060e-53
Identity = 107/153 (69.93%), Postives = 115/153 (75.16%), Query Frame = 0 
Query:    1 LTTLNLSSNELDGAAIRSSAPHLGALSSLESLDLSCNRVDALLGLPFLPRLRRLLVPYNRLTSRRGTAPRSVSRIDQSQALASSLVYLDVRDNRIAGPAHAHTPHLAALARLSSLLLMSPGGG---QANPVCASTGYREVMFSATCSLETLDG 150
            LT LNLSSNELDG AIRS APHLG L+SLESLDLSCNR+D LLGLPFLP LRRLLVPYNRLTS           +D  QALASSL +LD RDNRIAGPA AH PHLAAL RL SL L S G G   Q NP+CA  GYRE +F+A  SL+TLDG
Sbjct:   88 LTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTS-----------LDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREDVFAAARSLKTLDG 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16501.3707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTU3_9PHAE3.860e-5469.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK56_ECTSI3.060e-5369.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 26..39
score: 50.66
coord: 1..13
score: 47.62
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 1..136
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..150
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..150
e-value: 8.0E-19
score: 69.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 27..40
e-value: 0.23
score: 11.6
coord: 1..13
e-value: 0.44
score: 10.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 28..49
score: 8.028
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1..21
score: 4.732

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16501contigH-paniculata_contig16501:3457..4450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16501.3707.1mRNA_H-paniculata_contig16501.3707.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16501 3457..4450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16501.3707.1 ID=prot_H-paniculata_contig16501.3707.1|Name=mRNA_H-paniculata_contig16501.3707.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
LTTLNLSSNELDGAAIRSSAPHLGALSSLESLDLSCNRVDALLGLPFLPR
LRRLLVPYNRLTSRRGTAPRSVSRIDQSQALASSLVYLDVRDNRIAGPAH
AHTPHLAALARLSSLLLMSPGGGQANPVCASTGYREVMFSATCSLETLDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt