prot_H-paniculata_contig1650.3704.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1650.3704.1
Unique Nameprot_H-paniculata_contig1650.3704.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length882
Homology
BLAST of mRNA_H-paniculata_contig1650.3704.1 vs. uniprot
Match: D8LK50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK50_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 1.080e-171
Identity = 426/906 (47.02%), Postives = 516/906 (56.95%), Query Frame = 0
Query:    1 MATRGGRG-WAGEKSKRFMMVGTKDSLPTGTKSGVVAPVPINTPSLRQEIHGSQGENTGISSISRSSAGGGWGT-IAGISPAGNASDETSGSGKGTGRVGGDRSQGGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKPESAKDHGPSLRPRAMLKPTGSAGGGSAATAAAQAAIKDAVHNRVADKPKPEEPRRNSSSFADEISPKSRWPGRSQQEGGQQEXXXXXXXXXXGGRGAWDRSREGGXXXXXXXXXXXXXXXXHRDGFQDK-DRRNVGWSSDRNA-GSSRARESIFGLGAHTGVGSV--DTENAGGVPKPTTMYVRQHGPPPRKTSTHGTS-TPVKTQVPPQQHDRHVSTTHQSSSVRSSGESDTDPW-----TPTEASKWRSSSSPVDEPV--GAQEASPTLDSSSSQSGTHVHTHGPPRRGGREGPGDEKGDAS-SSSRSEGGHTAGRKPDAASEAPSRFASAGGVSEQGRGGTERDSVGSGERTLSGRWKEPATALAPPPAPTNTRWKEPKEEQFAPRPGMKRWRNGSREESNMGSGKWNREIGSVGDADGNAGPSDQSPTAPLYEQQAPLEEWQHGGTQTAHRAQEDQSTRPMEQQLHKRQPQVGASVQQPPQHLHLHDQPPHLKQEYRPPPPTAFSSFQQQDRRQHQMQEPVLRQFQPDHFRAQNYHTQEQGGPPSVPE-HVQHRQYQQEHLHXXXXXXXXXXXXQPPQQMHMPQHTLQQHSLXXXXXXXXXXXXXXQGQQQIPPAPLANHMNQVHHSRQHPVIPQQQXXXXXXXXXXXXXXXXXXXXGXXXXXXXXHHQEIGRQISQPQQLLVQQPQQHPPFLGYSDPRARGAGGLGGLPVHNMAPPGSYRDMPL---------QQPGIPPPGPYGFQSPESHHKR 881
            MA RGGRG WAG+K+KR+MMVGTKD++P G K+GVVAPVPINTPSLRQEI   QG+N G ++I+RS +GGGWG+ +A  + A +A+ +         R  G   Q GDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPK E AKD GPSLRPRAMLKPTGSAGGGSAATAAAQAAI DAVHNRVA  PKPEE RR  +SFADEIS KSRW  R  QEGG +           G  G W+ ++E G                 RD F +K DRR+   +S+R+A  S+R RESIFG GAH GV S   D+ + G    P+T YVRQHGPPPRK +T  T+  P   Q  P    +   ++  S+S  S+ +S  DPW     TP   SKWRS+S    +P      EA    DS SSQSG++V  HGPPRR GREG  DE+G+ S SSSR +  H AG +P       SRF  + G  EQG+   ++DS    ERT SGRWKEPA +LAPPP PTNTRWKEPKEE   PR G +RW+  +RE+  MG G+W R      D D +                 PLEEWQ GG Q + R+Q++Q+   +E QL ++QP V  S Q   Q LHLH+   +L + Y+  P   FSSFQ Q   +HQMQ+P L QFQ +HF+AQ Y  Q+      +PE H+   QYQ +H+             Q PQ MH PQH+      XXXXXXXXXXX     QQQ+      +   Q+  SRQ     Q                               H  +   Q+  P    +   Q     +G +DPR     GLGGLPV    P   YRD             Q G+  PG YG QSPE+HHKR
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDAVPAGAKTGVVAPVPINTPSLRQEI---QGDNAGTAAINRSGSGGGWGSAVASSASANSAAGQXXXXXXXXXRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEISTKSRWAERPLQEGGSR-----GRGAGRGTGGTWEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSKTPSTTYVRQHGPPPRKVATPATTPAPAAQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSVETP---SKWRSASPSNPQPAMDAPPEAPQMPDSPSSQSGSYVRAHGPPRRSGREGQADERGETSISSSRPD--HDAGGEP------TSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAGSLAPPPHPTNTRWKEPKEE---PRAGARRWK--AREDGQMGGGRWGRSAEEDADIDDSXXXXXXXXXXXXX---VPLEEWQQGGAQASRRSQQNQTAHAVEPQLQQQQP-VHQSHQPASQPLHLHEHA-NLDRGYQRNPSEGFSSFQPQ---KHQMQDPGLHQFQAEHFQAQAYQNQQSASRGPLPEQHLPRHQYQSDHV---PVQRQHFNQVQIPQHMHPPQHSAXXXXXXXXXXXXXXXXHQGHPQQQV-----YHQGQQLDMSRQTSQAQQM------------------------------HMHQHHLQMQHPSSAFMMPSQ----GMG-TDPRGARGVGLGGLPVQMATP---YRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 828          
BLAST of mRNA_H-paniculata_contig1650.3704.1 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE)

HSP 1 Score: 447 bits (1150), Expect = 8.100e-138
Identity = 315/578 (54.50%), Postives = 375/578 (64.88%), Query Frame = 0
Query:    1 MATRGGRG-WAGEKSKRFMMVGTKDSLPTGTKSGVVAPVPINTPSLRQEIHGSQGENTGISSISRSSAGGGWGT-IAGISPAGNASDETSGSGKGTGRVGGDRSQGGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKPESAKDHGPSLRPRAMLKPTGSAGGGSAATAAAQAAIKDAVHNRVADKPKPEEPRRNSSSFADEISPKSRWPGRSQQEGGQQEXXXXXXXXXXGGRGAWDRSREGGXXXXXXXXXXXXXXXXHRDGFQDK-DRRNVGWSSDRNA-GSSRARESIFGLGAHTGVGSV--DTENAGGVPKPTTMYVRQHGPPPRKTSTHGTS-TPVKTQVPPQQHDRHVSTTHQSSSVRSSGESDTDPW--TPTEASKWRSSSSPVDEPV--GAQEASPTLDSSSSQSGTHVHTHGPPRRGGREGPGDEKGDAS-SSSRSEGGHTAGRKPDAASEAPSRFASAGGVSEQGRGGTERDSVGSGERTLSGRWKEPATALAPPPAPTNTRWKEPKEEQFAPRPGMKRWRNGSREESNMGSGKWNREIGSVGDADGN--AGPSDQSPTA 564
            MA RGGRG WAG+K+KR+MMVGTKD+LP G K+GVVAPVPINTPSLRQEI   QGEN G ++I+RS +GGGWG+ +   + A +A+ ++  SG G GR  G   Q GDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPK E AKD GPSLRPRAMLKPTGSAGGGS ATAAAQAAI DAVHNRVA  PKPEE RR  +SFADEIS KSRW  R  QEGG +           G  G W+ ++E G                 RD F +K DRR+   +S+R+A  S+R RESIFG GAH GV S   D+ + G    P+T YVRQHGPPPRK +T  T+  P   Q  P    +   ++  S+S  S+ +S  DPW  +    SKWRS+S    +P      EA P  DS SSQSG++V   GP    GREG  DE+ + S SSSRS+  H AG +P       SRF  + G  EQG+   ++DS    ERT SGRWKEPA +LAPPP PTNTRWKEPKEE   PR G +RW+  +RE+  MG G+W R  G   D D +  A P+  SPT+
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDALPAGAKTGVVAPVPINTPSLRQEI---QGENAGTAAINRSGSGGGWGSAVVSSASANSAAGQSVASGNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEISTKSRWAERPFQEGGSR-----VRGAGRGTGGTWEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSATPSTTYVRQHGPPPRKAATPATTPAPAVQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSAETLSKWRSASPSNPQPAMDAPPEAPPMPDSPSSQSGSYVRGDGP----GREGQADERVETSVSSSRSD--HDAGGEP------TSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAGSLAPPPHPTNTRWKEPKEE---PRAGARRWK--AREDGQMGGGRWGRSAGEDADIDDSSAAPPTMASPTS 553          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1650.3704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK50_ECTSI1.080e-17147.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJY1_9PHAE8.100e-13854.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1650contigH-paniculata_contig1650:11624..18412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1650.3704.1mRNA_H-paniculata_contig1650.3704.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1650 10328..18442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1650.3704.1 ID=prot_H-paniculata_contig1650.3704.1|Name=mRNA_H-paniculata_contig1650.3704.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=882bp
MATRGGRGWAGEKSKRFMMVGTKDSLPTGTKSGVVAPVPINTPSLRQEIH
GSQGENTGISSISRSSAGGGWGTIAGISPAGNASDETSGSGKGTGRVGGD
RSQGGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKPESAKDH
GPSLRPRAMLKPTGSAGGGSAATAAAQAAIKDAVHNRVADKPKPEEPRRN
SSSFADEISPKSRWPGRSQQEGGQQEGAGGDRGRGGGGRGAWDRSREGGR
ERGGDRGRGYDRERGHRDGFQDKDRRNVGWSSDRNAGSSRARESIFGLGA
HTGVGSVDTENAGGVPKPTTMYVRQHGPPPRKTSTHGTSTPVKTQVPPQQ
HDRHVSTTHQSSSVRSSGESDTDPWTPTEASKWRSSSSPVDEPVGAQEAS
PTLDSSSSQSGTHVHTHGPPRRGGREGPGDEKGDASSSSRSEGGHTAGRK
PDAASEAPSRFASAGGVSEQGRGGTERDSVGSGERTLSGRWKEPATALAP
PPAPTNTRWKEPKEEQFAPRPGMKRWRNGSREESNMGSGKWNREIGSVGD
ADGNAGPSDQSPTAPLYEQQAPLEEWQHGGTQTAHRAQEDQSTRPMEQQL
HKRQPQVGASVQQPPQHLHLHDQPPHLKQEYRPPPPTAFSSFQQQDRRQH
QMQEPVLRQFQPDHFRAQNYHTQEQGGPPSVPEHVQHRQYQQEHLHRQQY
NHVQMHQQQPPQQMHMPQHTLQQHSLHQPQHSPQHMHPHQQGQQQIPPAP
LANHMNQVHHSRQHPVIPQQQQQQPQQQQPQPPPPQQQQQQGQQGQQGQQ
HHQEIGRQISQPQQLLVQQPQQHPPFLGYSDPRARGAGGLGGLPVHNMAP
PGSYRDMPLQQPGIPPPGPYGFQSPESHHKR*
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