prot_H-paniculata_contig1644.3674.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1644.3674.1
Unique Name	prot_H-paniculata_contig1644.3674.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	124

Homology

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 5.580e-35
Identity = 59/116 (50.86%), Postives = 83/116 (71.55%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KCH+D+ F  +L ++ N   I IPGG+T + QP D +LNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW K+AW+
Sbjct:   91 RECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWE 206

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.970e-34
Identity = 60/116 (51.72%), Postives = 84/116 (72.41%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KCH+D+ +  +L ++ N   I+IPGGLT + QP D MLNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW K+AW+
Sbjct:  230 RECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWE 345

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5L467_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L467_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.590e-34
Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+W  R    S+ +Q+P +LV+DD+KCH+D+ F  +L  + N   I IPGGL  + QP D MLNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW K+ W+
Sbjct:   14 RECNGWISGSWNLRPNNGSIVQQRPCILVLDDFKCHKDESFIAALKNDANTIVIFIPGGLAPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKQKPPERGVVSTWCKEEWE 129

[Close]

BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.590e-34
Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KCH+ + F  +L ++ N   I IPGGLT + QP D MLNK+MKR +  KYTA+SA+ + D + GK KPP RG VSTW K+AW+
Sbjct:   14 RECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKAEGFMAALKRDANTMVIFIPGGLTPLVQPLDRMLNKQMKRLLWGKYTAYSASAVIDARSGKLKPPERGVVSTWCKEAWE 129

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.450e-33
Identity = 60/124 (48.39%), Postives = 85/124 (68.55%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWDQTPADLAR 123
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KCH+D+ F  +L ++ N   I IPG LT + QP D MLNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW K+AW+ +  +  +
Sbjct:  230 RECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVK 353

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.660e-33
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KC +D+ F  +L ++ N   I IPGGLT + QP D +LNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW  +AW+
Sbjct:   14 RECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWE 129

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.940e-33
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G WK R    S+ +Q+P +LV+DD+K H+D+ F  +L ++ N   I IPGGLT + QP D MLNK+MKR +R KY A+SA+ +AD + GK KPP RG VSTW K+AW+
Sbjct:  111 RECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWE 226

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BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.250e-33
Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+  +LV+DD+KCH+ + F   L ++ N   I IPGG T + QP D MLNK+MKR +R KYTA+SA+ +AD + GK KPP RG VSTW KKAW+
Sbjct:   14 RECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWE 129

[Close]

BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.470e-33
Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD+KCH D+ F  +L ++ N   I IPGGLT + QP D MLNK+MKR +R KYTA+S + +AD + GK KPP RG VSTW K+AW+
Sbjct:  425 RECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWE 540

[Close]

BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 9.300e-33
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    1 RGCKLWLGGNWKGRTGT-SLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNIDTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKPPGRGAVSTWVKKAWD 115
            R C  W+ G+WK R    S+ +Q+P +LV+DD KCH+ + F  +L ++ N   I IPGGLT + QP D MLNK+MKR +R KYTA+S + +AD + GK KPP RG VSTW K+AW+
Sbjct:  111 RECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWE 226

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1644.3674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4U1_9PHAE	5.580e-35	50.86	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JUK2_9PHAE	1.970e-34	51.72	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L467_9PHAE	2.590e-34	50.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JTI5_9PHAE	2.590e-34	50.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K6L9_9PHAE	1.450e-33	48.39	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L8W0_9PHAE	1.660e-33	50.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KT06_9PHAE	2.940e-33	50.86	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JBJ7_9PHAE	3.250e-33	50.86	DDE-1 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A6H5JHT8_9PHAE	3.470e-33	51.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQK9_9PHAE	9.300e-33	50.86	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 6..118 e-value: 3.0E-12 score: 46.6
None	No IPR available	PANTHER	PTHR19303:SF23	POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAIN	coord: 6..120
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 6..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1644	contig	H-paniculata_contig1644:11926..12297 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1644.3674.1	mRNA_H-paniculata_contig1644.3674.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1644 11926..12297 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1644.3674.1 ID=prot_H-paniculata_contig1644.3674.1|Name=mRNA_H-paniculata_contig1644.3674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
RGCKLWLGGNWKGRTGTSLFRQQPNVLVVDDYKCHRDQKFQESLNKEVNI
DTILIPGGLTAVNQPCDWMLNKEMKRGVRVKYTAWSATTMADPKRGKFKP
PGRGAVSTWVKKAWDQTPADLARK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom