prot_H-paniculata_contig16394.3653.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig16394.3653.1
Unique Name	prot_H-paniculata_contig16394.3653.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	87

Homology

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BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot
Match: D7FST7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST7_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.590e-14
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0

Query:    4 HRFRTPLMAAAATGEFSLFRTILHAFNRFFITNHDDGRKVKLR-EQLQIEDVSGMTLLIIAVRSGSIAVVRALLNE-RGIWMPRR 86
            HR RTPLMAAAATG  +LF T+LHA NR       +  ++ LR +QL+  D SGMTLL++A RSGS+ ++ A++   R +  P R
Sbjct:   65 HRMRTPLMAAAATGSLALFTTVLHAVNRAIGEQRMETNRISLRRKQLEYVDESGMTLLMLAARSGSVGILEAVVERVRIVEAPER 149

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BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot
Match: A0A6H5JBB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB0_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.330e-13
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 0

Query:    4 HRFRTPLMAAAATGEFSLFRTILHAFNRFFITNHDDGRKVKLRE-QLQIEDVSGMTLLIIAVRSGSIAVVRALLNE 78
            HR RTPLMAAAATG  +LF T+LHA NR       +  ++ LR+ QL+  D SGMTLL++A RSG++ ++ A++  
Sbjct:  108 HRMRTPLMAAAATGSLALFATVLHAVNRAIGEQRMETNRISLRKKQLEYMDESGMTLLMLAARSGNVGILEAVVER 183

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BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot
Match: D7FN08_ECTSI (Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN08_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 9.900e-9
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0

Query:    1 MLRHRFRTPLMAAAATGEFSLFRTILHAFNRFFITNHDDGRKVKLREQLQIEDVSGMTLLIIAVRSGSIAVVRALLNE 78
            + +H+ RTPLMAAAATG+ +     L A N+ +  ++   R+ ++R QL   D  GMT L++A RS S+AV+  LL E
Sbjct:   98 LAKHKMRTPLMAAAATGDLATCTATLQALNQQY--SNKLARESEMRTQLTNRDREGMTALMLAARSSSVAVLGELLTE 173

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BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot
Match: A0A6H5KM21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM21_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.210e-7
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0

Query:    3 RHRFRTPLMAAAATGEFSLFRTILHAFNRFFIT-----NHDDGRKVKLREQLQIEDVSGMTLLIIAVRSGSIAVVRAL 75
            RH+ RTPLMAAAATG+  +   +L AF   F+      N  + R   +++QL + DV GMTLL+ A  + S AV +AL
Sbjct:   72 RHKLRTPLMAAAATGQMPIVGVVLAAFGDVFMEGEVKENMVNARMKGMQKQLDMVDVEGMTLLMHACSTSSSAVFQAL 149

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig16394.3653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FST7_ECTSI	2.590e-14	48.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JBB0_9PHAE	1.330e-13	48.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FN08_ECTSI	9.900e-9	42.31	Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5KM21_9PHAE	1.210e-7	43.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..81 e-value: 1.5E-8 score: 36.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 7..78
IPR002110	Ankyrin repeat	PFAM	PF13606	Ank_3	coord: 56..81 e-value: 0.001 score: 19.3
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..53
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 77..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig16394	contig	H-paniculata_contig16394:3591..4587 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig16394.3653.1	mRNA_H-paniculata_contig16394.3653.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig16394 3591..4999 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig16394.3653.1 ID=prot_H-paniculata_contig16394.3653.1|Name=mRNA_H-paniculata_contig16394.3653.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MLRHRFRTPLMAAAATGEFSLFRTILHAFNRFFITNHDDGRKVKLREQLQ
IEDVSGMTLLIIAVRSGSIAVVRALLNERGIWMPRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt