prot_H-paniculata_contig16394.3652.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16394.3652.1
Unique Nameprot_H-paniculata_contig16394.3652.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length299
Homology
[Close]
BLAST of mRNA_H-paniculata_contig16394.3652.1 vs. uniprot
Match: D7FST7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST7_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.960e-12
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:    1 MYAASAGNSAVFAKVFRAIELAFSTQEYEVEEQLTATSGDKRNLLMHAARSGDHMTLAKVTSSVKRVLLPKKVRHLLKEVDGDRMTFLMHASTA 94
            M+AA A  SAVF  +   ++  +      VEEQL A+S D R +LMHAAR GD M    V+ + +R ++P ++R L+K+VDG+ +TFLMHA +A
Sbjct:  162 MHAAGARRSAVFTVILDELQRCYKDN---VEEQLLASSADDRTILMHAARCGDQMGALSVSHACQRFIMPSRLRKLIKQVDGEGVTFLMHAISA 252
[Close]
BLAST of mRNA_H-paniculata_contig16394.3652.1 vs. uniprot
Match: A0A6H5JBB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 4.030e-10
Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:    9 SAVFAKVFRAIELAFSTQEYEVEEQLTATSGDKRNLLMHAARSGDHMTLAKVTSSVKRVLLPKKVRHLLKEVDGDRMTFLMHASTA 94
            SAVF  +   ++  +      VEEQL A+S D R +LMHAAR GD M +  V+ + +R ++P ++R L+K+VD + +TFLMHA +A
Sbjct:  211 SAVFTVILNELQRCYKDN---VEEQLLASSADDRTILMHAARCGDQMGVLSVSHACQRFIMPSRLRKLVKQVDSEGVTFLMHAISA 293
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16394.3652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FST7_ECTSI1.960e-1244.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBB0_9PHAE4.030e-1043.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16394contigH-paniculata_contig16394:489..3034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16394.3652.1mRNA_H-paniculata_contig16394.3652.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16394 359..4999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16394.3652.1 ID=prot_H-paniculata_contig16394.3652.1|Name=mRNA_H-paniculata_contig16394.3652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MYAASAGNSAVFAKVFRAIELAFSTQEYEVEEQLTATSGDKRNLLMHAAR
SGDHMTLAKVTSSVKRVLLPKKVRHLLKEVDGDRMTFLMHASTAAKEGST
KRSSGESKIRGNMSQSAAAPRRPKAKTSGYSSRSRESKLKTFTTDDRPRR
ASTGSLRASSLPTTVESDILSETGDEEHGRDRGSPRSEEPALSPASNPEL
LVVELIEAATASGSDQMRIGNIDGSVIIFKCAYDFVREMLWKEEVRDQLK
AKDSLGSTILTYAALSKHTKLFNAIFYGMRDGMLDSEVRLSNQRGYEW*
back to top