prot_H-paniculata_contig16326.3625.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16326.3625.1
Unique Nameprot_H-paniculata_contig16326.3625.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
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BLAST of mRNA_H-paniculata_contig16326.3625.1 vs. uniprot
Match: D7G1G7_ECTSI (Tetratricopeptide repeat family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G7_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.340e-18
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 0 
Query:   11 LQKANGDRDPETVACLSWIAETHQKQGQYFEAEKILLQVVAFNRELLGDDDPRVADSLTDLAELLRAQGKL 81
            + + +G    ETVACLSWIAETH+KQ  Y +AE IL++VV  NR++LGD  P VADSLTDL EL RAQG L
Sbjct:  269 MDQEHGRVHSETVACLSWIAETHEKQEHYQDAEPILIEVVELNRQILGDGKPGVADSLTDLGELRRAQGNL 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16326.3625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1G7_ECTSI1.340e-1861.97Tetratricopeptide repeat family n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 24..83
e-value: 8.1E-13
score: 48.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..98
e-value: 4.7E-18
score: 67.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16326contigH-paniculata_contig16326:4930..5235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16326.3625.1mRNA_H-paniculata_contig16326.3625.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16326 4930..5235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16326.3625.1 ID=prot_H-paniculata_contig16326.3625.1|Name=mRNA_H-paniculata_contig16326.3625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MRAFCITTKILQKANGDRDPETVACLSWIAETHQKQGQYFEAEKILLQVV
AFNRELLGDDDPRVADSLTDLAELLRAQGKLDEVRMKLSESQIRSATACC
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf