mRNA_H-paniculata_contig16309.3615.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: L8GSN7_ACACA (Midasin family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSN7_ACACA) HSP 1 Score: 54.7 bits (130), Expect = 8.830e-7 Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVTVDPSR 184
L E+GDV P++RHP+ +F PT+ K +LP LR FT F D + V+ R
Sbjct: 964 LTEKGDVEPIKRHPNFRVFACMNPPTDIGKKNLPPGLRNRFTEFYVDELSNVEDLR 1019
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: A0A158R841_TAEAS (Midasin n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A158R841_TAEAS) HSP 1 Score: 54.7 bits (130), Expect = 8.960e-7 Identity = 25/54 (46.30%), Postives = 31/54 (57.41%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVTVDP 178
L +RGD+ PV+RHPD LF T+ K DLPT LR FT R+ +DP
Sbjct: 622 LVDRGDLEPVKRHPDFHLFAAMNPSTDVGKRDLPTGLRNRFTEL---RVAELDP 672
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: UPI0006239004 (LOW QUALITY PROTEIN: midasin n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006239004) HSP 1 Score: 54.7 bits (130), Expect = 8.960e-7 Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVTVDPSRL 187
L ERGD PV+RHPD +F T+ K DLP LR FT F D ++ RL
Sbjct: 844 LLERGDEEPVKRHPDFTIFACMNPATDVGKKDLPVGLRNRFTEFYIDELIQKPDLRL 900
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: A0A164Y7Z6_9CRUS (Midasin n=2 Tax=Daphnia TaxID=6668 RepID=A0A164Y7Z6_9CRUS) HSP 1 Score: 54.3 bits (129), Expect = 1.210e-6 Identity = 25/51 (49.02%), Postives = 28/51 (54.90%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVT 169
L ERGD PV+RHPD LF T+ K LPT LR FT F D I +
Sbjct: 822 LLERGDREPVKRHPDFRLFAAMNPATDVGKKQLPTGLRSRFTEFIVDEITS 872
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: A0A0N8DWL2_9CRUS (Midasin n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8DWL2_9CRUS) HSP 1 Score: 54.3 bits (129), Expect = 1.220e-6 Identity = 25/51 (49.02%), Postives = 28/51 (54.90%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVT 169
L ERGD PV+RHPD LF T+ K LPT LR FT F D I +
Sbjct: 822 LLERGDREPVKRHPDFRLFAAMNPATDVGKKQLPTGLRSRFTEFIVDEITS 872
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: UPI001651EBC8 (midasin n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001651EBC8) HSP 1 Score: 53.9 bits (128), Expect = 1.660e-6 Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRI 163
L ERGD++PV+RHPD LF T+ K DLP +R FT F + +
Sbjct: 727 LTERGDIDPVKRHPDFRLFACMNPATDVGKKDLPAGIRNRFTEFFVEEL 775
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: A0A482W347_9CUCU (AAA 5 domain containing protein (Fragment) n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482W347_9CUCU) HSP 1 Score: 53.5 bits (127), Expect = 2.260e-6 Identity = 24/49 (48.98%), Postives = 27/49 (55.10%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRI 163
L ERGD PV+RHPD LF T+ K DLP LR FT F D +
Sbjct: 341 LLERGDKEPVKRHPDFTLFACMNPSTDVGKKDLPAGLRNRFTEFFVDEL 389
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: A0A158QCU3_HYMDI (Midasin n=11 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A158QCU3_HYMDI) HSP 1 Score: 53.5 bits (127), Expect = 2.290e-6 Identity = 25/55 (45.45%), Postives = 31/55 (56.36%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRIVTVDPS 181
L +RGD+ PVRRHPD LF T+ K DLP LR FT R+ ++PS
Sbjct: 621 LVDRGDLEPVRRHPDFHLFAAMNPSTDVGKRDLPMGLRNRFTEI---RVAELEPS 672
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: E9FYV2_DAPPU (Midasin n=3 Tax=Daphnia TaxID=6668 RepID=E9FYV2_DAPPU) HSP 1 Score: 53.5 bits (127), Expect = 2.290e-6 Identity = 24/49 (48.98%), Postives = 27/49 (55.10%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRI 163
L ERGD P++RHPD LF T+ K LPT LR FT F D I
Sbjct: 808 LLERGDREPIKRHPDFRLFAAMNPATDVGKKQLPTGLRSRFTEFVVDEI 856
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Match: E9IJJ4_SOLIN (Uncharacterized protein (Fragment) n=1 Tax=Solenopsis invicta TaxID=13686 RepID=E9IJJ4_SOLIN) HSP 1 Score: 53.1 bits (126), Expect = 3.100e-6 Identity = 23/49 (46.94%), Postives = 27/49 (55.10%), Query Frame = 2
Query: 17 LAERGDVNPVRRHPDIGLFTVGYKPTNTSKNDLPTALRRSFT*FCADRI 163
L ERGD PV+RHPD +F T+ K DLP LR FT F D +
Sbjct: 746 LLERGDAEPVKRHPDFTIFACMNPATDVGKRDLPVGLRNRFTEFYIDEL 794 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16309.3615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16309.3615.1 >prot_H-paniculata_contig16309.3615.1 ID=prot_H-paniculata_contig16309.3615.1|Name=mRNA_H-paniculata_contig16309.3615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp MTFLQPFAEVLHSFVLTESLQSTLRGLVRAVASSSYPVLLRGPTR*back to top mRNA from alignment at H-paniculata_contig16309:2546..2944- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16309.3615.1 ID=mRNA_H-paniculata_contig16309.3615.1|Name=mRNA_H-paniculata_contig16309.3615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=399bp|location=Sequence derived from alignment at H-paniculata_contig16309:2546..2944- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16309:2546..2944- >mRNA_H-paniculata_contig16309.3615.1 ID=mRNA_H-paniculata_contig16309.3615.1|Name=mRNA_H-paniculata_contig16309.3615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig16309:2546..2944- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |