prot_H-paniculata_contig163.3612.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig163.3612.1
Unique Nameprot_H-paniculata_contig163.3612.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length804
Homology
BLAST of mRNA_H-paniculata_contig163.3612.1 vs. uniprot
Match: A0A6H5JBS2_9PHAE (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS2_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 1.370e-163
Identity = 436/835 (52.22%), Postives = 499/835 (59.76%), Query Frame = 0
Query:    1 MPRQATRSAANRGPLDKLRGPVRKMAEEVFSVDTDRSVLKDEPLMNGLSELQTKQALKVLDTYCQNVQRQGSGRIQNKAAYLMSLIQSYKLGPSSGSP-GSAQRLVERLSPAVRRAVDGVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIDNRCGYLIGFLKQYQDGVAVMGVSNNTANNGSAQPGSSRGAPTSTVTSNGDHLAPPPKSAAQTTPLANGNAMANGSRGATSNGSGGVSAVTVASATKQVAASSPXXXXXXXXXXASGVRPILYLQESVRKQLEKLFESGKDKAVLEDVGLIKQLARLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPITKGAWEGSSXXXXXXXXXXXXXXXGPARTGRGGGRGSGTLTDDTERMSSHPVPNSEGDAPQQXXXXXXXXXXXXXXXXXXXVPAPPAAPS-------------LEVPGPREFGGFANAPAQQXXXXXXXXXHSAFSS-----AVRPM-PVPSLQSFTSPLTSPPLGGGLCLGGVGLAN-GNSSSVGDVPQHRYDSSNVLLYINGGGGVPGFGIAPVPPPANQPPRHASPHESLFGHSPTLGVGDGSRRQHQHQTLVGPGLLGGEFLSNGGGSDRGLVHNGPAANGSGAAGPXXXXXXXXXMGVL---------FGSGLLAGDELGGFGNGSIPASPGSASGMGSTSGVASSSLSGVGAXXXXXXXXXXXXXXXSGGHDSTLTTMPLSTTTPMT-SVSNTDTCSSAAARVGSSSSNSGSNASEEGRENLNSSEAAVGGMIDMLARLNLSKYVPVLAEAEVDMDALRLFGE 804
            MPRQATR      P+DKLRGPVRK A        DR+ L+D+PL+ GLSELQTKQALKVLDTYC NVQRQGSGRIQNKAAYLMSLIQSYKLGP+ G+  GSAQRL+ERLSP V +AV GVFDPV+DR V EDRALMELLAKVPEEQALAALKKYRATVQRRGRDAI+NRCGYLIGFLKQYQDGVA++GV  N  +        +R A  S+    G HL       + ++     N  ANG+R    NG+GG  + T  S+++   A   XXXXXXX   +SGVRPI YLQ  VRK+LEKLFESGKDK VLEDVGLIKQL+RLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPI+K  WEG                  P  T R   R                           XXXXXXXXXXXXXXXXXXX  +    P+             +  P PRE GGFANAPAQ  XXXXXXXX            VRP  P+ S+ +  S   SPPLGG     G  LA+  +  + G   Q +Y+ SN LLY+NG G                P RH SPHESLFG        +G     Q QTLVGPGLLGG+FL++GGG           AN +G    XXXXXXXXX             FGS   +   LG     +IP SPGS SG+                XXXX           S   + T  T+P STTT  T S  +     S++    +  ++SGS  S +GREN +SS      ++D+LARLNLSKYV VLAEAEVD+DALRLFGE
Sbjct:   29 MPRQATR------PVDKLRGPVRKAA----LAGLDRTSLQDDPLLTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGATAGSAQRLLERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAIVGVPGNAVHQ-------ARNALESSSNGYGQHLTNGSAGQSSSSATNGHNPNANGARNGAMNGAGGGPSATATSSSQGTGAXXXXXXXXXXN--SSGVRPITYLQAPVRKELEKLFESGKDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGNEDGPGVNAPTA----PPGTNRA--RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXPATXXXXXXXXXXVAVSAP-PRELGGFANAPAQTQXXXXXXXXXXXXXXXXXXXVVRPAAPLTSISATRS--ASPPLGGD----GRFLASLRHDGASGRPSQGQYEPSNGLLYMNGSGTHQXXXXXXXXXXXXXPLRHVSPHESLFGGGHLSANHNGG----QPQTLVGPGLLGGDFLASGGG-----------ANWTGXXXXXXXXXXXXXXXXXXXXXXXXENFGSCSNSRSNLGN----AIPQSPGSGSGL--------XXXXXXXXXXXXVPDSGVESPLSSDAGNDTPGTLPSSTTTTATVSAGSLSVAGSSSCNGSTDWASSGSPESVQGRENTDSSNG--NSVVDVLARLNLSKYVAVLAEAEVDLDALRLFGE 802          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBS2_9PHAE1.370e-16352.22SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 289..358
e-value: 5.8E-11
score: 42.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig163contigH-paniculata_contig163:38641..44644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig163.3612.1mRNA_H-paniculata_contig163.3612.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig163 38297..44644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig163.3612.1 ID=prot_H-paniculata_contig163.3612.1|Name=mRNA_H-paniculata_contig163.3612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=804bp
MPRQATRSAANRGPLDKLRGPVRKMAEEVFSVDTDRSVLKDEPLMNGLSE
LQTKQALKVLDTYCQNVQRQGSGRIQNKAAYLMSLIQSYKLGPSSGSPGS
AQRLVERLSPAVRRAVDGVFDPVVDRVVLEDRALMELLAKVPEEQALAAL
KKYRATVQRRGRDAIDNRCGYLIGFLKQYQDGVAVMGVSNNTANNGSAQP
GSSRGAPTSTVTSNGDHLAPPPKSAAQTTPLANGNAMANGSRGATSNGSG
GVSAVTVASATKQVAASSPGPGGGGGGGGASGVRPILYLQESVRKQLEKL
FESGKDKAVLEDVGLIKQLARLGEEQALAALKNYKEASKHRRDIHNKSAY
LMGILRGYIEGTTPITKGAWEGSSNGSGSVSGNGGGSDDGPARTGRGGGR
GSGTLTDDTERMSSHPVPNSEGDAPQQQASPPPPPPPSQQQQQQPPVPAP
PAAPSLEVPGPREFGGFANAPAQQQQPQQQQQQHSAFSSAVRPMPVPSLQ
SFTSPLTSPPLGGGLCLGGVGLANGNSSSVGDVPQHRYDSSNVLLYINGG
GGVPGFGIAPVPPPANQPPRHASPHESLFGHSPTLGVGDGSRRQHQHQTL
VGPGLLGGEFLSNGGGSDRGLVHNGPAANGSGAAGPSNPASPGNPMGVLF
GSGLLAGDELGGFGNGSIPASPGSASGMGSTSGVASSSLSGVGAGNGSRT
GSPLGSEGGSGGHDSTLTTMPLSTTTPMTSVSNTDTCSSAAARVGSSSSN
SGSNASEEGRENLNSSEAAVGGMIDMLARLNLSKYVPVLAEAEVDMDALR
LFGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD