mRNA_H-paniculata_contig163.3610.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: D7FLD8_ECTSI (Mitochondrial import inner membrane translocase TIM14 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD8_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.920e-54 Identity = 115/232 (49.57%), Postives = 148/232 (63.79%), Query Frame = 1
Query: 16 MAARAHASLQRVRPKVYSIAHRCTLPTVGRFGMGTAGNNKSREKQQQIEKVACDSSDGRARAFRALQRQTRDIHVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGEKSAQGEST--------------TSSLFGAFGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
MAAR + ++P S++HRC LP +GR G ++ N +S ++D ARA +AL Q RDIHV+ RNE++++++G G+A SAM ARYGL Y ++ H PE T+E D AG+++ FGAFGKRHY+GGF++KM+R+EAALILGVRESA QRIKD+HRRILMINHPDKGGSKYMAAKINEAKE+LLKGR
Sbjct: 1 MAARPLVRIAGLKP---SVSHRCPLPLLGRLGATSSSNRES------------GANDRHARA-QALVSQARDIHVSRRNESSVLITGAGIAVSAMVARYGLMEYQKYQAAH-----PEITEE---ADSGAAGDQTXXXXXXXXXXXXXXXXXXXXAGGFFGAFGKRHYDGGFEEKMTRKEAALILGVRESATAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR 208
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: K8Z3F4_NANGC (Chaperone-domain containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3F4_NANGC) HSP 1 Score: 146 bits (369), Expect = 1.700e-37 Identity = 81/150 (54.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGEKSAQGESTTSSLFGAFGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R +H T R EN L++ GL VA A+A +YGL+AY W+ K + ++K G + F KR YEGGF+DKM+RREAALILGVRESA+PQRIK+AHRRILM+NHPD GGS Y+A+KINEAKE+LLKGR
Sbjct: 91 QIRALHATRRQEN-LVVGGLVVAGGALALQYGLRAYKQWQAKKAAE----------GAEDKADGXXXXXXXXXXXXMSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGR 229
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A1Z5KKT5_FISSO (DnaJ homolog subfamily C member 19 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKT5_FISSO) HSP 1 Score: 133 bits (334), Expect = 1.600e-32 Identity = 78/151 (51.66%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 235 HVTPRNENTL-ILSGLG-VAASAMAARYGLQAYNNWKVKHGEQP---EPEATKEQPVTDEKTAGEKSAQGESTTSSLFGA-FGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
H + NE + I+ GLG V+A++ AA G++AYN WK E+P E E TKE P + + EK + E+ + FGA G ++YEGGF+++M+RREAALILGVRES++P RIK+AHR++L++NHPD GGS Y+A K+NEAKE+LLKG+
Sbjct: 75 HSSSANEKAVAIILGLGAVSAASYAAASGIKAYNEWKASLPEEPPEIEKEETKEAPKKEMEEEQEKGDR-ENIFAKWFGASVGAKYYEGGFEEEMTRREAALILGVRESSSPARIKEAHRKLLVLNHPDTGGSTYIAGKLNEAKELLLKGK 224
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: W4FRD9_9STRA (J domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRD9_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.920e-32 Identity = 68/150 (45.33%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGEKSAQGESTTSSLFGAFGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R +H T +N L++ LGVAA+A+ +Y L+AY ++ K P S G S++SS+F + Y+G F+DKM+RREAALILGVRESA+P RI++AHR++L+ NHPD GGS ++++KINEAKE+LL G+
Sbjct: 34 QRRSLHATRSQDNALVVGSLGVAAAALGGKYLLEAYEGYQAKKASSP-------------------SGTGASSSSSVFNMSYRNFYDGPFEDKMTRREAALILGVRESASPDRIRNAHRKLLIANHPDTGGSTFLSSKINEAKELLLGGK 164
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A6U3QJ97_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QJ97_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.530e-31 Identity = 74/165 (44.85%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 220 QTRDIHVT-PRNENTLILSGLG-VAASAMAARYGLQAYNNWKVKHGEQPEPEATK--------EQPVTDEKTAGEKSAQGESTTSSLFGAF-----GKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R H T P ++ GLG VAA+A A +Y ++AY WK E+PE + T+ E T ++ +++ + + ++F F G ++YEGGF+D M++REAALILGVRES+ P+RIKDAHR++L++NHPD GGS Y++ KINEAKE+LLKG+
Sbjct: 71 QVRYYHSTQPVERGAALVLGLGAVAATAKAGQYAVRAYEEWKASQPEEPEEKTTEDATFQSKDENDSTKKQETKQEAKKDDGKRENIFAKFFNMGVGSKYYEGGFEDTMTKREAALILGVRESSTPKRIKDAHRKLLILNHPDTGGSTYLSGKINEAKELLLKGK 235
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A7S2JUU2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUU2_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.070e-31 Identity = 76/157 (48.41%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTLILSGLG-VAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGE--KSAQGESTTSSLFGAFG----KRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R+ H+T + E+ + +GL VA A A +YGL+A+ W+ K+ + EP+A + K++ + + F FG ++YEGGF+DKM+RREAALILGVRESA +RIKDAHR+IL++NHPD GGS YMA+KINEAKE+LLKG+
Sbjct: 80 QRREYHLTTKTESVALAAGLAAVAVGAKAGQYGLRAFEEWQ-KNQPKEEPKAADDTTXXXXXXXXXXAKASDSKKEKVNFFDQFGFGVGSKYYEGGFEDKMTRREAALILGVRESATVKRIKDAHRKILILNHPDTGGSTYMASKINEAKELLLKGK 235
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A024TT26_9STRA (J domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TT26_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.690e-29 Identity = 68/150 (45.33%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGEKSAQGESTTSSLFGAFGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R +H T R EN +++ LGVAA+A+ +Y L+AY +K A K TD+ +A +SS+F + Y+G F++KM+RREAALILGVRESA+ RI++AHR++L+ NHPD GGS +++ KINEAKE+LL G+
Sbjct: 52 QRRSLHATRRQENAIVVGSLGVAAAALGGKYLLEAYEGYK----------ANKAASGTDKSSA----------SSSMFNMSYRNFYDGPFEEKMTRREAALILGVRESASADRIRNAHRKLLIANHPDTGGSTFISTKINEAKELLLGGK 181
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A1V9Z1B4_9STRA (J domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1B4_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.130e-29 Identity = 69/153 (45.10%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKHGEQPEPEATKEQPVTDEKTAGEKSAQGESTTSSLFGAFG---KRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q+R +H T ++ LI+ G GVA +AM+ +Y LQ+Y ++ P EA G+ A+G S+ F F + Y+G F+DKM+RREAALILGVRE+A P RI++AHR++L+ NHPD GGS +++ KINEAKEMLL G+
Sbjct: 25 QSRYLHATRPQDSALIVGGAGVAVAAMSVKYLLQSYQQYQAAKAAAPAEEAK-----------GKSDAKGTSSERGSFFNFNMSYRNFYDGPFEDKMTRREAALILGVRENANPDRIRNAHRKLLIANHPDTGGSTFLSTKINEAKEMLLNGK 166
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A482S026_9ARCH (J domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S026_9ARCH) HSP 1 Score: 122 bits (306), Expect = 6.650e-29 Identity = 74/161 (45.96%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 235 HVTPRNENTLILSGLGVAASAMAARYGLQAYNNWKVKH----GEQPEPEATKEQPVTDEKTAGEKSAQGES----TTSS-------LFGA-FGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
H + EN LI+ GL V +A+ RY + AY +K + P EA +E+ + E A+ +S TTSS LF + F + Y+GGF++KM++REAALILGVRESAA +R+K+AHRR+L++NHPDKGGS ++ AKINEAK++LLKG+
Sbjct: 34 HSSRMAENQLIIGGLAVLGTAVTLRYAVAAYETYKQNQPAVTDQPPAEEANQEEVKSKTGARAEPRAEAQSSARKTTSSSGNPADSLFSSWFARNFYDGGFEEKMTKREAALILGVRESAAVERVKEAHRRMLILNHPDKGGSVFITAKINEAKDLLLKGK 194
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Match: A0A7S3LBB7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBB7_9STRA) HSP 1 Score: 123 bits (308), Expect = 7.870e-29 Identity = 73/162 (45.06%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 220 QTRDIHVTPRNENTL-ILSGLG-VAASAMAARYGLQAYNNWKVKHGEQPEPEAT---------KEQPVTDEKTAGEKSAQGESTTSSLFGA-FGKRHYEGGFDDKMSRREAALILGVRESAAPQRIKDAHRRILMINHPDKGGSKYMAAKINEAKEMLLKGR 669
Q R H T + + I+ GLG VAA + +A G++AYN WK ++P E T +E+ K +K + ++ FG G ++YEGGF+++M+RREAALILGVRES++ RIKDAHR++L++NHPD GGS Y+A K+NEAKE+LLKG+
Sbjct: 63 QIRAYHSTASQDRAVAIMLGLGTVAAVSYSAAQGVKAYNEWKESLPDEPPEEETTNKAEDLKQEEKKTEQPKAKDQKKQKRDNIFKEWFGVGVGAKYYEGGFEEQMTRREAALILGVRESSSTSRIKDAHRKLLILNHPDTGGSTYIAGKLNEAKELLLKGK 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig163.3610.1 >prot_H-paniculata_contig163.3610.1 ID=prot_H-paniculata_contig163.3610.1|Name=mRNA_H-paniculata_contig163.3610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=221bp MMAARAHASLQRVRPKVYSIAHRCTLPTVGRFGMGTAGNNKSREKQQQIEback to top mRNA from alignment at H-paniculata_contig163:28955..31664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig163.3610.1 ID=mRNA_H-paniculata_contig163.3610.1|Name=mRNA_H-paniculata_contig163.3610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2710bp|location=Sequence derived from alignment at H-paniculata_contig163:28955..31664- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig163:28955..31664- >mRNA_H-paniculata_contig163.3610.1 ID=mRNA_H-paniculata_contig163.3610.1|Name=mRNA_H-paniculata_contig163.3610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at H-paniculata_contig163:28955..31664- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |